RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 KIAA2026Q5HYC2 2103 aa2.13□□□□□ -2.07
SKP1-204ENST00000517691 IGHV7-81A0A0B4J1V7 117 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 TRAV41A0A0B4J266 112 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 A0A1B0GV72 72 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 SMIM9A6NGZ8 99 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 MSGN1A6NI15 193 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 G3V318 75 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 SMKR1H3BMG3 65 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 ATP6V0E1O15342 81 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 ARPC5O15511 151 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 MED6O75586 246 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 OR2A4O95047 310 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 NDUFA3O95167 84 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 CA2P00918 260 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 KRASP01116 189 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 IGHG2P01859 326 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 FRMD6-AS1P0C7T7 363 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 SAA1P0DJI8 122 aaPredicted RBP2.12□□□□□ -2.07
SKP1-204ENST00000517691 C8orf88P0DMB2 117 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 APELAP0DMC3 54 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 IGHV4-30-4P0DP06 118 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 HIST1H1EP10412 219 aaKnown RBP2.12□□□□□ -2.07
SKP1-204ENST00000517691 AKR1C4P17516 323 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 RPL35AP18077 110 aaKnown RBP2.12□□□□□ -2.07
SKP1-204ENST00000517691 C4BPBP20851 252 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 FAUP35544 74 aaKnown RBP2.12□□□□□ -2.07
SKP1-204ENST00000517691 LPAR6P43657 344 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 GALR1P47211 349 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 PIGPP57054 158 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 ERVK-16P61578 105 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 RPL19P84098 196 aaKnown RBP2.12□□□□□ -2.07
SKP1-204ENST00000517691 ZNF45Q02386 682 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 TMEM267Q0VDI3 215 aaPredicted RBP2.12□□□□□ -2.07
SKP1-204ENST00000517691 SMCO1Q147U7 214 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 FXYD3Q14802 87 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 MSMO1Q15800 293 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 ECSCRQ19T08 205 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 UNQ5815/PRO19632Q6UWF5 114 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 C10orf99Q6UWK7 81 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 TMEM144Q7Z5S9 345 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 MRPL52Q86TS9 123 aaKnown RBP2.12□□□□□ -2.07
SKP1-204ENST00000517691 PPP1R27Q86WC6 154 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 MTURNQ8N3F0 131 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 GDPD1Q8N9F7 314 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 OR4X2Q8NGF9 303 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 OR51S1Q8NGJ8 323 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 OR4C16Q8NGL9 310 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 OR13C8Q8NGS7 320 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 DDB2Q92466 427 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 ARPC1AQ92747 370 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 OR2A7Q96R45 310 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 RARRES2Q99969 163 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 FAM103A1Q9BTL3 118 aaKnown RBP2.12□□□□□ -2.07
SKP1-204ENST00000517691 FXYD6Q9H0Q3 95 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 OR51J1Q9H342 316 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 ZNF430Q9H8G1 570 aaPredicted RBP2.12□□□□□ -2.07
SKP1-204ENST00000517691 ZNF355PQ9NSJ1 428 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 COPZ2Q9P299 210 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 V9GYH0 126 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 ANK2Q01484 3957 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 C3orf85A0A1B0GTC6 90 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 MRPS12O15235 138 aaKnown RBP2.12□□□□□ -2.07
SKP1-204ENST00000517691 CREBL2O60519 120 aaPredicted RBP2.12□□□□□ -2.07
SKP1-204ENST00000517691 EIF3GO75821 320 aaKnown RBP eCLIP2.12□□□□□ -2.07
SKP1-204ENST00000517691 SNAPC5O75971 98 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 S1PR2O95136 353 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 HPRT1P00492 218 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 IGLV2-23P01705 113 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 HLA-DRB1P01911 266 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 NBEAP1P0C6P0 100 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 F2RP25116 425 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 G6PCP35575 357 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 ETV6P41212 452 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 TFPI2P48307 235 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 TCL1AP56279 114 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 FLI1Q01543 452 aaPredicted RBP2.12□□□□□ -2.07
SKP1-204ENST00000517691 CD164Q04900 197 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 EIF4EBP1Q13541 118 aaPredicted RBP2.12□□□□□ -2.07
SKP1-204ENST00000517691 KLF9Q13886 244 aaPredicted RBP2.12□□□□□ -2.07
SKP1-204ENST00000517691 ZNF79Q15937 498 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 PRSS8Q16651 343 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 SP6Q3SY56 376 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 TMED4Q7Z7H5 227 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 OR10W1Q8NGF6 305 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 SGMS2Q8NHU3 365 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 RNASE11Q8TAA1 199 aaKnown RBP2.12□□□□□ -2.07
SKP1-204ENST00000517691 VSTM2AQ8TAG5 236 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 CASTOR1Q8WTX7 329 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 ZNF486Q96H40 463 aaPredicted RBP2.12□□□□□ -2.07
SKP1-204ENST00000517691 C20orf144Q9BQM9 153 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 ZNF256Q9Y2P7 627 aaPredicted RBP2.12□□□□□ -2.07
SKP1-204ENST00000517691 KLF12Q9Y4X4 402 aa2.12□□□□□ -2.07
SKP1-204ENST00000517691 TRAV3A0A0B4J244 114 aa2.11□□□□□ -2.07
SKP1-204ENST00000517691 GAGE12JA6NER3 117 aa2.11□□□□□ -2.07
SKP1-204ENST00000517691 NAP1L6A6NFF2 107 aa2.11□□□□□ -2.07
SKP1-204ENST00000517691 RBFOX2O43251 390 aaKnown RBP eCLIP2.11□□□□□ -2.072e-14■■■■■ 49.8
SKP1-204ENST00000517691 SOX15O60248 233 aa2.11□□□□□ -2.07
SKP1-204ENST00000517691 ATG12O94817 140 aa2.11□□□□□ -2.07
SKP1-204ENST00000517691 KBTBD11O94819 623 aa2.11□□□□□ -2.07
SKP1-204ENST00000517691 IFNA21P01568 189 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms