RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 Q8N814 137 aa0.67□□□□□ -2.3
SKP1-203ENST00000517625 TEX47Q8TBZ9 253 aa0.67□□□□□ -2.3
SKP1-203ENST00000517625 GPR146Q96CH1 333 aa0.67□□□□□ -2.3
SKP1-203ENST00000517625 PARD6GQ9BYG4 376 aaPredicted RBP0.67□□□□□ -2.3
SKP1-203ENST00000517625 KRTAP2-1Q9BYU5 128 aa0.67□□□□□ -2.3
SKP1-203ENST00000517625 ACER3Q9NUN7 267 aa0.67□□□□□ -2.3
SKP1-203ENST00000517625 RASL12Q9NYN1 266 aa0.67□□□□□ -2.3
SKP1-203ENST00000517625 TVP23BQ9NYZ1 205 aa0.67□□□□□ -2.3
SKP1-203ENST00000517625 RALGAPA2Q2PPJ7 1873 aa0.67□□□□□ -2.3
SKP1-203ENST00000517625 APCP25054 2843 aa0.66□□□□□ -2.3
SKP1-203ENST00000517625 MAST2Q6P0Q8 1798 aa0.66□□□□□ -2.3
SKP1-203ENST00000517625 A0A087X0T9 212 aa0.66□□□□□ -2.3
SKP1-203ENST00000517625 FAM236DA0A1B0GTK5 79 aa0.66□□□□□ -2.3
SKP1-203ENST00000517625 hADV38S2A0JD32 116 aa0.66□□□□□ -2.3
SKP1-203ENST00000517625 SULT1B1O43704 296 aa0.66□□□□□ -2.3
SKP1-203ENST00000517625 HAND1O96004 215 aa0.66□□□□□ -2.3
SKP1-203ENST00000517625 C8GP07360 202 aa0.66□□□□□ -2.3
SKP1-203ENST00000517625 FAM236CP0DP71 79 aa0.66□□□□□ -2.3
SKP1-203ENST00000517625 ZNF93P35789 620 aaPredicted RBP0.66□□□□□ -2.3
SKP1-203ENST00000517625 ANP32AP39687 249 aaKnown RBP0.66□□□□□ -2.3
SKP1-203ENST00000517625 SSR2P43308 183 aa0.66□□□□□ -2.3
SKP1-203ENST00000517625 RANP62826 216 aaKnown RBP0.66□□□□□ -2.3
SKP1-203ENST00000517625 CCL7P80098 99 aa0.66□□□□□ -2.3
SKP1-203ENST00000517625 AESQ08117 197 aa0.66□□□□□ -2.3
SKP1-203ENST00000517625 GDF5OSQ5U4N7 250 aa0.66□□□□□ -2.3
SKP1-203ENST00000517625 Q6Q795 121 aa0.66□□□□□ -2.3
SKP1-203ENST00000517625 SLC22A13Q9Y226 551 aa0.66□□□□□ -2.3
SKP1-203ENST00000517625 DIDO1Q9BTC0 2240 aaKnown RBP0.66□□□□□ -2.3
SKP1-203ENST00000517625 RTL1A6NKG5 1358 aa0.66□□□□□ -2.3
SKP1-203ENST00000517625 ROBO3Q96MS0 1386 aa0.66□□□□□ -2.3
SKP1-203ENST00000517625 ITPR2Q14571 2701 aa0.66□□□□□ -2.3
SKP1-203ENST00000517625 FRYLO94915 3013 aa0.65□□□□□ -2.3
SKP1-203ENST00000517625 PCDH15Q96QU1 1955 aa0.65□□□□□ -2.31
SKP1-203ENST00000517625 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.65□□□□□ -2.31
SKP1-203ENST00000517625 hCG_1818297A0A087WSY0 165 aa0.65□□□□□ -2.31
SKP1-203ENST00000517625 TRAV1-1A0A0B4J248 108 aa0.65□□□□□ -2.31
SKP1-203ENST00000517625 A8MT66 165 aa0.65□□□□□ -2.31
SKP1-203ENST00000517625 PDE6DO43924 150 aa0.65□□□□□ -2.31
SKP1-203ENST00000517625 LYZL6O75951 148 aa0.65□□□□□ -2.31
SKP1-203ENST00000517625 TCRBP04435 133 aa0.65□□□□□ -2.31
SKP1-203ENST00000517625 RPS17P08708 135 aaKnown RBP0.65□□□□□ -2.31
SKP1-203ENST00000517625 LSM6P62312 80 aaKnown RBP0.65□□□□□ -2.31
SKP1-203ENST00000517625 PRB3Q04118 309 aaPredicted RBP0.65□□□□□ -2.31
SKP1-203ENST00000517625 SRSF6Q13247 344 aaKnown RBP0.65□□□□□ -2.31
SKP1-203ENST00000517625 ITGB3BPQ13352 177 aaPredicted RBP0.65□□□□□ -2.31
SKP1-203ENST00000517625 TSNQ15631 228 aaKnown RBP0.65□□□□□ -2.31
SKP1-203ENST00000517625 C1orf137Q5JT78 98 aa0.65□□□□□ -2.31
SKP1-203ENST00000517625 LCA10Q71F78 164 aa0.65□□□□□ -2.31
SKP1-203ENST00000517625 MNS1Q8NEH6 495 aa0.65□□□□□ -2.31
SKP1-203ENST00000517625 OR51V1Q9H2C8 321 aa0.65□□□□□ -2.31
SKP1-203ENST00000517625 FBXO5Q9UKT4 447 aa0.65□□□□□ -2.31
SKP1-203ENST00000517625 ZFP30Q9Y2G7 519 aa0.65□□□□□ -2.31
SKP1-203ENST00000517625 CDH23Q9H251 3354 aa0.65□□□□□ -2.31
SKP1-203ENST00000517625 BCL9LQ86UU0 1499 aa0.65□□□□□ -2.31
SKP1-203ENST00000517625 COL4A5P29400 1685 aa0.65□□□□□ -2.31
SKP1-203ENST00000517625 WNK1Q9H4A3 2382 aa0.64□□□□□ -2.31
SKP1-203ENST00000517625 SMG1Q96Q15 3661 aaKnown RBP0.64□□□□□ -2.31
SKP1-203ENST00000517625 USH2AO75445 5202 aa0.64□□□□□ -2.31
SKP1-203ENST00000517625 MUC12Q9UKN1 5478 aa0.64□□□□□ -2.31
SKP1-203ENST00000517625 SMIM9A6NGZ8 99 aa0.64□□□□□ -2.31
SKP1-203ENST00000517625 MGST1P10620 155 aaKnown RBP0.64□□□□□ -2.31
SKP1-203ENST00000517625 CDKN2CP42773 168 aa0.64□□□□□ -2.31
SKP1-203ENST00000517625 CNBPP62633 177 aaKnown RBP0.64□□□□□ -2.31
SKP1-203ENST00000517625 SPA17Q15506 151 aa0.64□□□□□ -2.31
SKP1-203ENST00000517625 RNASE10Q5GAN6 216 aaKnown RBP0.64□□□□□ -2.31
SKP1-203ENST00000517625 C3orf56Q8N813 242 aa0.64□□□□□ -2.31
SKP1-203ENST00000517625 OR8D4Q8NGM9 314 aa0.64□□□□□ -2.31
SKP1-203ENST00000517625 HIST1H2BLQ99880 126 aa0.64□□□□□ -2.31
SKP1-203ENST00000517625 PARVBQ9HBI1 364 aa0.64□□□□□ -2.31
SKP1-203ENST00000517625 C14orf132Q9NPU4 83 aa0.64□□□□□ -2.31
SKP1-203ENST00000517625 GLTPQ9NZD2 209 aa0.64□□□□□ -2.31
SKP1-203ENST00000517625 INTS1Q8N201 2190 aaKnown RBP0.64□□□□□ -2.31
SKP1-203ENST00000517625 SPENQ96T58 3664 aaKnown RBP0.64□□□□□ -2.31
SKP1-203ENST00000517625 LOC400499M0QZD8 3231 aa0.64□□□□□ -2.31
SKP1-203ENST00000517625 PHLPP1O60346 1717 aa0.64□□□□□ -2.31
SKP1-203ENST00000517625 MYO3BQ8WXR4 1341 aa0.64□□□□□ -2.31
SKP1-203ENST00000517625 ALPK2Q86TB3 2170 aa0.63□□□□□ -2.31
SKP1-203ENST00000517625 MAP1AP78559 2803 aaPredicted RBP0.63□□□□□ -2.31
SKP1-203ENST00000517625 BAZ1AQ9NRL2 1556 aaPredicted RBP0.63□□□□□ -2.31
SKP1-203ENST00000517625 TRBV6-8A0A0A6YYG3 113 aa0.63□□□□□ -2.31
SKP1-203ENST00000517625 ESRGQ1W209 222 aa0.63□□□□□ -2.31
SKP1-203ENST00000517625 BRMS1LQ5PSV4 323 aa0.63□□□□□ -2.31
SKP1-203ENST00000517625 LYRM7Q5U5X0 104 aa0.63□□□□□ -2.31
SKP1-203ENST00000517625 SOSTDC1Q6X4U4 206 aa0.63□□□□□ -2.31
SKP1-203ENST00000517625 OR52R1Q8NGF1 315 aa0.63□□□□□ -2.31
SKP1-203ENST00000517625 OR51A2Q8NGJ7 313 aa0.63□□□□□ -2.31
SKP1-203ENST00000517625 OR2T10Q8NGZ9 312 aa0.63□□□□□ -2.31
SKP1-203ENST00000517625 FAM172AQ8WUF8 416 aa0.63□□□□□ -2.31
SKP1-203ENST00000517625 PPP1R14BQ96C90 147 aa0.63□□□□□ -2.31
SKP1-203ENST00000517625 BTF3L4Q96K17 158 aa0.63□□□□□ -2.31
SKP1-203ENST00000517625 OBSCN-AS1Q96MR7 158 aa0.63□□□□□ -2.31
SKP1-203ENST00000517625 PRAP1Q96NZ9 151 aa0.63□□□□□ -2.31
SKP1-203ENST00000517625 LINC00467Q9BRT7 94 aa0.63□□□□□ -2.31
SKP1-203ENST00000517625 TMEM133Q9H2Q1 129 aa0.63□□□□□ -2.31
SKP1-203ENST00000517625 UCK1Q9HA47 277 aa0.63□□□□□ -2.31
SKP1-203ENST00000517625 NMNAT1Q9HAN9 279 aaPredicted RBP0.63□□□□□ -2.31
SKP1-203ENST00000517625 UQCC1Q9NVA1 299 aa0.63□□□□□ -2.31
SKP1-203ENST00000517625 IDI2-AS1Q9NZ38 188 aa0.63□□□□□ -2.31
SKP1-203ENST00000517625 PRELID3BQ9Y3B1 194 aa0.63□□□□□ -2.31
SKP1-203ENST00000517625 DLG5Q8TDM6 1919 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms