RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 UCP3P55916 312 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 DLX1P56177 255 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 UBE2KP61086 200 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 ZNF616Q08AN1 781 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 GAGE1Q13065 139 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 KLRD1Q13241 179 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 ZNF726P1Q15940 193 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 PDZD11Q5EBL8 140 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 LDLRAD2Q5SZI1 272 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 TEX38Q6PEX7 206 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 TMEM182Q6ZP80 229 aaPredicted RBP2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 SSX7Q7RTT5 188 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 LYZL2Q7Z4W2 148 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 LHFPL4Q7Z7J7 247 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 MRPL52Q86TS9 123 aaKnown RBP2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 PDPNQ86YL7 162 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 FOXRED2Q8IWF2 684 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 H1FOOQ8IZA3 346 aaPredicted RBP2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 Q8N6K4 173 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 RNF152Q8N8N0 203 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 NECAP1Q8NC96 275 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 NPBQ8NG41 125 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 OR52L2PQ8NGH6 319 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 C11orf45Q8TAV5 145 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 FAM213BQ8TBF2 198 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 CD300LFQ8TDQ1 290 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 IL1F10Q8WWZ1 152 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 TOMM40LQ969M1 308 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 TVP23CQ96ET8 276 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 ABHD14BQ96IU4 210 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 FAM210BQ96KR6 192 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 SCGB3A2Q96PL1 93 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 HSD17B10Q99714 261 aaKnown RBP2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 HDHD3Q9BSH5 251 aaPredicted RBP2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 PBDC1Q9BVG4 233 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 IFI27L2Q9H2X8 130 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 PLEKHA3Q9HB20 300 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 LIN7CQ9NUP9 197 aaKnown RBP2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 TMEM242Q9NWH2 141 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 GSKIPQ9P0R6 139 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 KCNIP3Q9Y2W7 256 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 OR2W1Q9Y3N9 320 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 LSM5Q9Y4Y9 91 aaKnown RBP2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 HILPDAQ9Y5L2 63 aa2.3□□□□□ -2.04
SCARNA13-201ENST00000516672 DSCAML1Q8TD84 2053 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 SAA2-SAA4A0A096LPE2 208 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 TRAV39A0A0B4J263 110 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 A0A1B0GV50 99 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 A0A1W2PPQ1 181 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 SMCO3A2RU48 225 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 FAM24AA6NFZ4 105 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 B4DEV8 164 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 H0YJW9 148 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 CYB5BO43169 146 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 DLEU1O43261 78 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 GGCTO75223 188 aaKnown RBP2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 PROP1O75360 226 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 NDUFA3O95167 84 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 GCGP01275 180 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 PPYP01298 95 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 APOA2P02652 100 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 TYMSP04818 313 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 IL6RP08887 468 aaPredicted RBP2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 NPSP0C0P6 89 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 LINC00614P0C842 121 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 SAA2P0DJI9 122 aaPredicted RBP2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 CT45A6P0DMU7 189 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 CT45A5P0DMU8 189 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 CT45A7P0DMV0 189 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 BCL2P10415 239 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 GCSHP23434 173 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 UCP1P25874 307 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 S100GP29377 79 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 KIR2DS2P43631 304 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 GPR12P47775 334 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 GNG10P50151 68 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 PIGPP57054 158 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 LINC00310P59036 64 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 RUNX1Q01196 453 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 HNF4GQ14541 408 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 PRSS8Q16651 343 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 LTC4SQ16873 150 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 RTL8BQ17RB0 113 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 SP6Q3SY56 376 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 NMSQ5H8A3 153 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 ACTL10Q5JWF8 245 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 KRTAP5-10Q6L8G5 202 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 ZNF562Q6V9R5 426 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 DPPA3Q6W0C5 159 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 ZNF66Q6ZN08 573 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 MOB3BQ86TA1 216 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 HAPLN4Q86UW8 402 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 CMTM1Q8IZ96 169 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 DYNAPQ8N1N2 210 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 OR2C3Q8N628 320 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 DRAM1Q8N682 238 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 STPG3Q8N7X2 389 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 HSD17B11Q8NBQ5 300 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 OR10V1Q8NGI7 309 aa2.29□□□□□ -2.04
SCARNA13-201ENST00000516672 VSTM2AQ8TAG5 236 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms