RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 ANXA2RQ3ZCQ2 193 aa9.04□□□□□ -0.96
TRIM41-209ENST00000515834 GGNQ86UU5 652 aa9.04□□□□□ -0.96
TRIM41-209ENST00000515834 CD177Q8N6Q3 437 aa9.04□□□□□ -0.96
TRIM41-209ENST00000515834 YLPM1P49750 1951 aaKnown RBP9.04□□□□□ -0.96
TRIM41-209ENST00000515834 TNFSF13O75888 250 aa9.04□□□□□ -0.96
TRIM41-209ENST00000515834 TCRAP04437 139 aa9.04□□□□□ -0.96
TRIM41-209ENST00000515834 DDTP30046 118 aa9.04□□□□□ -0.96
TRIM41-209ENST00000515834 EFNB3Q15768 340 aa9.04□□□□□ -0.96
TRIM41-209ENST00000515834 NR2C2APQ86WQ0 139 aa9.04□□□□□ -0.96
TRIM41-209ENST00000515834 ADMP35318 185 aa9.04□□□□□ -0.96
TRIM41-209ENST00000515834 NABP1Q96AH0 204 aa9.04□□□□□ -0.96
TRIM41-209ENST00000515834 MS4A6AQ9H2W1 248 aa9.04□□□□□ -0.96
TRIM41-209ENST00000515834 CACNA1BQ00975 2339 aa9.04□□□□□ -0.96
TRIM41-209ENST00000515834 ALPK2Q86TB3 2170 aa9.04□□□□□ -0.96
TRIM41-209ENST00000515834 FAM223BA6NKX1 122 aa9.03□□□□□ -0.96
TRIM41-209ENST00000515834 KNCNA6PVL3 124 aa9.03□□□□□ -0.96
TRIM41-209ENST00000515834 FAM223AQ8IWN6 122 aa9.03□□□□□ -0.96
TRIM41-209ENST00000515834 ZNF236Q9UL36 1845 aa9.03□□□□□ -0.96
TRIM41-209ENST00000515834 CADP27708 2225 aa9.03□□□□□ -0.96
TRIM41-209ENST00000515834 ATP5L2Q7Z4Y8 100 aa9.03□□□□□ -0.96
TRIM41-209ENST00000515834 RASL10AQ92737 203 aa9.03□□□□□ -0.96
TRIM41-209ENST00000515834 A0A096LPF7 62 aa9.03□□□□□ -0.96
TRIM41-209ENST00000515834 A6NNC1 897 aa9.03□□□□□ -0.96
TRIM41-209ENST00000515834 E7EQL1 145 aa9.03□□□□□ -0.96
TRIM41-209ENST00000515834 SUMO4Q6EEV6 95 aa9.03□□□□□ -0.96
TRIM41-209ENST00000515834 HEPN1Q6WQI6 88 aa9.03□□□□□ -0.96
TRIM41-209ENST00000515834 NRN1Q9NPD7 142 aa9.03□□□□□ -0.96
TRIM41-209ENST00000515834 F8VVB4 439 aa9.03□□□□□ -0.96
TRIM41-209ENST00000515834 F8VWA3 439 aa9.03□□□□□ -0.96
TRIM41-209ENST00000515834 K7ENP7 123 aa9.03□□□□□ -0.96
TRIM41-209ENST00000515834 ZNF48Q96MX3 618 aaPredicted RBP9.03□□□□□ -0.96
TRIM41-209ENST00000515834 TMEM126AQ9H061 195 aa9.03□□□□□ -0.96
TRIM41-209ENST00000515834 TRAV8-4A0A0B4J246 113 aa9.03□□□□□ -0.96
TRIM41-209ENST00000515834 H3BUT2 72 aa9.03□□□□□ -0.96
TRIM41-209ENST00000515834 ERVH48-1M5A8F1 160 aa9.03□□□□□ -0.96
TRIM41-209ENST00000515834 ZNF138P52744 262 aa9.03□□□□□ -0.96
TRIM41-209ENST00000515834 CCL20P78556 96 aa9.03□□□□□ -0.96
TRIM41-209ENST00000515834 HEATR1Q9H583 2144 aaKnown RBP9.03□□□□□ -0.96
TRIM41-209ENST00000515834 DOCK6Q96HP0 2047 aa9.02□□□□□ -0.96
TRIM41-209ENST00000515834 SCN10AQ9Y5Y9 1956 aa9.02□□□□□ -0.96
TRIM41-209ENST00000515834 COL4A1P02462 1669 aa9.02□□□□□ -0.96
TRIM41-209ENST00000515834 SRP19P09132 144 aaKnown RBP9.02□□□□□ -0.97
TRIM41-209ENST00000515834 SLC25A48Q6ZT89 311 aaKnown RBP9.02□□□□□ -0.97
TRIM41-209ENST00000515834 C14orf178Q8N769 122 aaPredicted RBP9.02□□□□□ -0.97
TRIM41-209ENST00000515834 FANCMQ8IYD8 2048 aa9.02□□□□□ -0.97
TRIM41-209ENST00000515834 BRCA1P38398 1863 aaKnown RBP9.02□□□□□ -0.97
TRIM41-209ENST00000515834 GAGE12JA6NER3 117 aa9.02□□□□□ -0.97
TRIM41-209ENST00000515834 SRRM5B3KS81 715 aa9.02□□□□□ -0.97
TRIM41-209ENST00000515834 GAGE1Q13065 139 aa9.02□□□□□ -0.97
TRIM41-209ENST00000515834 GAGE4Q13068 117 aa9.02□□□□□ -0.97
TRIM41-209ENST00000515834 GAGE5Q13069 117 aa9.02□□□□□ -0.97
TRIM41-209ENST00000515834 GAGE13Q4V321 117 aa9.02□□□□□ -0.97
TRIM41-209ENST00000515834 GAFA1Q96PS6 74 aa9.02□□□□□ -0.97
TRIM41-209ENST00000515834 SDK2Q58EX2 2172 aa9.02□□□□□ -0.97
TRIM41-209ENST00000515834 LINC00477Q96M19 166 aa9.02□□□□□ -0.97
TRIM41-209ENST00000515834 FNDC4Q9H6D8 234 aaPredicted RBP9.02□□□□□ -0.97
TRIM41-209ENST00000515834 SCN5AQ14524 2016 aa9.02□□□□□ -0.97
TRIM41-209ENST00000515834 IGKV1-9A0A0C4DH69 117 aa9.01□□□□□ -0.97
TRIM41-209ENST00000515834 APOC4P55056 127 aa9.01□□□□□ -0.97
TRIM41-209ENST00000515834 ZNF319Q9P2F9 582 aa9.01□□□□□ -0.97
TRIM41-209ENST00000515834 COL6A6A6NMZ7 2263 aa9.01□□□□□ -0.97
TRIM41-209ENST00000515834 DKK1O94907 266 aa9.01□□□□□ -0.97
TRIM41-209ENST00000515834 C1QL4Q86Z23 238 aa9.01□□□□□ -0.97
TRIM41-209ENST00000515834 NKAPP1Q8N9T2 125 aa9.01□□□□□ -0.97
TRIM41-209ENST00000515834 CSTL1Q9H114 145 aa9.01□□□□□ -0.97
TRIM41-209ENST00000515834 TRAV3A0A0B4J244 114 aa9.01□□□□□ -0.97
TRIM41-209ENST00000515834 A0A1B0GWJ7 208 aa9.01□□□□□ -0.97
TRIM41-209ENST00000515834 OOSP1A8MZH6 123 aa9.01□□□□□ -0.97
TRIM41-209ENST00000515834 RPL23P62829 140 aaKnown RBP9.01□□□□□ -0.97
TRIM41-209ENST00000515834 ATXN8Q156A1 80 aa9.01□□□□□ -0.97
TRIM41-209ENST00000515834 DOCK10Q96BY6 2186 aa9.01□□□□□ -0.97
TRIM41-209ENST00000515834 A0A087WV48 116 aa9.01□□□□□ -0.97
TRIM41-209ENST00000515834 A0A1B0GV90 55 aa9.01□□□□□ -0.97
TRIM41-209ENST00000515834 NDUFS8O00217 210 aa9.01□□□□□ -0.97
TRIM41-209ENST00000515834 HOXD3P31249 432 aaPredicted RBP9.01□□□□□ -0.97
TRIM41-209ENST00000515834 SPATA31B1PQ5VZV4 182 aa9.01□□□□□ -0.97
TRIM41-209ENST00000515834 ZNF114Q8NC26 417 aa9.01□□□□□ -0.97
TRIM41-209ENST00000515834 DOCK7Q96N67 2140 aa9.01□□□□□ -0.97
TRIM41-209ENST00000515834 LINC00114Q6XXX2 140 aa9.01□□□□□ -0.97
TRIM41-209ENST00000515834 LRRC37AA6NMS7 1700 aa9.01□□□□□ -0.97
TRIM41-209ENST00000515834 H0YJW9 148 aa9.01□□□□□ -0.97
TRIM41-209ENST00000515834 SERF1AO75920 110 aa9.01□□□□□ -0.97
TRIM41-209ENST00000515834 PAX9P55771 341 aa9.01□□□□□ -0.97
TRIM41-209ENST00000515834 PRDM13Q9H4Q3 707 aa9.01□□□□□ -0.97
TRIM41-209ENST00000515834 C9orf139Q6ZV77 190 aa9□□□□□ -0.97
TRIM41-209ENST00000515834 PTPRFP10586 1907 aa9□□□□□ -0.97
TRIM41-209ENST00000515834 GAGE12BA1L429 117 aa9□□□□□ -0.97
TRIM41-209ENST00000515834 ZNF98A6NK75 572 aa9□□□□□ -0.97
TRIM41-209ENST00000515834 SH2D1AO60880 128 aa9□□□□□ -0.97
TRIM41-209ENST00000515834 GAGE7O76087 117 aa9□□□□□ -0.97
TRIM41-209ENST00000515834 PPBPP02775 128 aa9□□□□□ -0.97
TRIM41-209ENST00000515834 GAGE12FP0CL80 117 aa9□□□□□ -0.97
TRIM41-209ENST00000515834 GAGE12GP0CL81 117 aa9□□□□□ -0.97
TRIM41-209ENST00000515834 GAGE12IP0CL82 117 aa9□□□□□ -0.97
TRIM41-209ENST00000515834 HAPLN4Q86UW8 402 aa9□□□□□ -0.97
TRIM41-209ENST00000515834 DAZ1Q9NQZ3 744 aaKnown RBP9□□□□□ -0.97
TRIM41-209ENST00000515834 ERG28Q9UKR5 140 aa9□□□□□ -0.97
TRIM41-209ENST00000515834 TRAV9-2A0A087WT02 112 aa9□□□□□ -0.97
TRIM41-209ENST00000515834 ITGB1BP1O14713 200 aa9□□□□□ -0.97
TRIM41-209ENST00000515834 LYZL1Q6UWQ5 148 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms