RNA–Protein interactions for RNA: ENST00000515609.1

TPM3-222, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-222ENST00000515609 TMEM231Q9H6L2 316 aa7.39□□□□□ -1.23
TPM3-222ENST00000515609 PUS1Q9Y606 427 aaKnown RBP eCLIP7.39□□□□□ -1.23
TPM3-222ENST00000515609 NAV3Q8IVL0 2385 aa7.39□□□□□ -1.23
TPM3-222ENST00000515609 PLXNB1O43157 2135 aa7.39□□□□□ -1.23
TPM3-222ENST00000515609 B4DEV8 164 aa7.38□□□□□ -1.23
TPM3-222ENST00000515609 NDUFA4O00483 81 aa7.38□□□□□ -1.23
TPM3-222ENST00000515609 LY6G6DO95868 133 aa7.38□□□□□ -1.23
TPM3-222ENST00000515609 SRP19P09132 144 aaKnown RBP7.38□□□□□ -1.23
TPM3-222ENST00000515609 HIST1H1EP10412 219 aaKnown RBP7.38□□□□□ -1.23
TPM3-222ENST00000515609 NPPCP23582 126 aa7.38□□□□□ -1.23
TPM3-222ENST00000515609 HILS1P60008 231 aa7.38□□□□□ -1.23
TPM3-222ENST00000515609 DEFA5Q01523 94 aa7.38□□□□□ -1.23
TPM3-222ENST00000515609 PDE6HQ13956 83 aa7.38□□□□□ -1.23
TPM3-222ENST00000515609 C10orf91Q5T1B1 145 aa7.38□□□□□ -1.23
TPM3-222ENST00000515609 RNF152Q8N8N0 203 aa7.38□□□□□ -1.23
TPM3-222ENST00000515609 ELOVL1Q9BW60 279 aa7.38□□□□□ -1.23
TPM3-222ENST00000515609 ZNF702PQ9H963 129 aa7.38□□□□□ -1.23
TPM3-222ENST00000515609 FASNP49327 2511 aaKnown RBP7.38□□□□□ -1.23
TPM3-222ENST00000515609 FAM181BA6NEQ2 426 aa7.37□□□□□ -1.23
TPM3-222ENST00000515609 H3BRN7 92 aa7.37□□□□□ -1.23
TPM3-222ENST00000515609 K7EQM0 130 aa7.37□□□□□ -1.23
TPM3-222ENST00000515609 S100A9P06702 114 aaKnown RBP7.37□□□□□ -1.23
TPM3-222ENST00000515609 NBEAP1P0C6P0 100 aa7.37□□□□□ -1.23
TPM3-222ENST00000515609 GALR1P47211 349 aa7.37□□□□□ -1.23
TPM3-222ENST00000515609 SAMD13Q5VXD3 122 aa7.37□□□□□ -1.23
TPM3-222ENST00000515609 PATE2Q6UY27 113 aa7.37□□□□□ -1.23
TPM3-222ENST00000515609 IL17RELQ6ZVW7 336 aa7.37□□□□□ -1.23
TPM3-222ENST00000515609 SSX7Q7RTT5 188 aa7.37□□□□□ -1.23
TPM3-222ENST00000515609 OR8I2Q8N0Y5 310 aa7.37□□□□□ -1.23
TPM3-222ENST00000515609 ARL6IP6Q8N6S5 226 aa7.37□□□□□ -1.23
TPM3-222ENST00000515609 CCDC140Q96MF4 163 aa7.37□□□□□ -1.23
TPM3-222ENST00000515609 RARRES2Q99969 163 aa7.37□□□□□ -1.23
TPM3-222ENST00000515609 SCRT1Q9BWW7 348 aa7.37□□□□□ -1.23
TPM3-222ENST00000515609 SLC25A2Q9BXI2 301 aa7.37□□□□□ -1.23
TPM3-222ENST00000515609 AAMDCQ9H7C9 122 aa7.37□□□□□ -1.23
TPM3-222ENST00000515609 CLEC5AQ9NY25 188 aa7.37□□□□□ -1.23
TPM3-222ENST00000515609 PEF1Q9UBV8 284 aaKnown RBP7.37□□□□□ -1.23
TPM3-222ENST00000515609 LINC00527Q9UJ94 153 aa7.37□□□□□ -1.23
TPM3-222ENST00000515609 ZNF98A6NK75 572 aa7.36□□□□□ -1.23
TPM3-222ENST00000515609 FAM74A7A6NL05 159 aa7.36□□□□□ -1.23
TPM3-222ENST00000515609 ZNF727A8MUV8 499 aa7.36□□□□□ -1.23
TPM3-222ENST00000515609 F8W735 103 aaPredicted RBP7.36□□□□□ -1.23
TPM3-222ENST00000515609 CEBPGP53567 150 aa7.36□□□□□ -1.23
TPM3-222ENST00000515609 PSG9Q00887 426 aa7.36□□□□□ -1.23
TPM3-222ENST00000515609 RHEBQ15382 184 aa7.36□□□□□ -1.23
TPM3-222ENST00000515609 TOMM20LQ6UXN7 152 aa7.36□□□□□ -1.23
TPM3-222ENST00000515609 CYB561D1Q8N8Q1 229 aa7.36□□□□□ -1.23
TPM3-222ENST00000515609 CMTM2Q8TAZ6 248 aa7.36□□□□□ -1.23
TPM3-222ENST00000515609 HIST1H2BAQ96A08 127 aa7.36□□□□□ -1.23
TPM3-222ENST00000515609 TVP23CQ96ET8 276 aa7.36□□□□□ -1.23
TPM3-222ENST00000515609 FAM167A-AS1Q96KT0 104 aa7.36□□□□□ -1.23
TPM3-222ENST00000515609 LINC00052Q96N35 136 aa7.36□□□□□ -1.23
TPM3-222ENST00000515609 SMIM7Q9BQ49 75 aa7.36□□□□□ -1.23
TPM3-222ENST00000515609 CHRDL1Q9BU40 450 aa7.36□□□□□ -1.23
TPM3-222ENST00000515609 TMPRSS5Q9H3S3 457 aa7.36□□□□□ -1.23
TPM3-222ENST00000515609 GSX1Q9H4S2 264 aaPredicted RBP7.36□□□□□ -1.23
TPM3-222ENST00000515609 C16orf95Q9H693 158 aa7.36□□□□□ -1.23
TPM3-222ENST00000515609 UFC1Q9Y3C8 167 aa7.36□□□□□ -1.23
TPM3-222ENST00000515609 S4R3C0 116 aa7.36□□□□□ -1.23
TPM3-222ENST00000515609 CSPG4Q6UVK1 2322 aa7.36□□□□□ -1.23
TPM3-222ENST00000515609 CCDC168Q8NDH2 2452 aa7.36□□□□□ -1.23
TPM3-222ENST00000515609 A0A1B0GUS0 222 aa7.35□□□□□ -1.23
TPM3-222ENST00000515609 SERTM2A0A1B0GWG4 89 aa7.35□□□□□ -1.23
TPM3-222ENST00000515609 FBLL1A6NHQ2 334 aaKnown RBP7.35□□□□□ -1.23
TPM3-222ENST00000515609 K7EMT4 169 aa7.35□□□□□ -1.23
TPM3-222ENST00000515609 TCF21O43680 179 aa7.35□□□□□ -1.23
TPM3-222ENST00000515609 ZNF253O75346 499 aa7.35□□□□□ -1.23
TPM3-222ENST00000515609 NDUFA7O95182 113 aa7.35□□□□□ -1.23
TPM3-222ENST00000515609 IGHV3-23P01764 117 aa7.35□□□□□ -1.23
TPM3-222ENST00000515609 LGALS1P09382 135 aaKnown RBP7.35□□□□□ -1.23
TPM3-222ENST00000515609 OR10J4P0C629 311 aa7.35□□□□□ -1.23
TPM3-222ENST00000515609 ATF4P18848 351 aaPredicted RBP7.35□□□□□ -1.23
TPM3-222ENST00000515609 ADMP35318 185 aa7.35□□□□□ -1.23
TPM3-222ENST00000515609 UBE2G2P60604 165 aa7.35□□□□□ -1.23
TPM3-222ENST00000515609 SRSF3P84103 164 aaKnown RBP7.35□□□□□ -1.23
TPM3-222ENST00000515609 TMEM241Q24JQ0 296 aa7.35□□□□□ -1.23
TPM3-222ENST00000515609 SPATA31B1PQ5VZV4 182 aa7.35□□□□□ -1.23
TPM3-222ENST00000515609 ZNF329Q86UD4 541 aa7.35□□□□□ -1.23
TPM3-222ENST00000515609 GPHB5Q86YW7 130 aa7.35□□□□□ -1.23
TPM3-222ENST00000515609 KLHDC1Q8N7A1 406 aa7.35□□□□□ -1.23
TPM3-222ENST00000515609 C5orf17Q8NAS9 161 aa7.35□□□□□ -1.23
TPM3-222ENST00000515609 NAT8Q9UHE5 227 aa7.35□□□□□ -1.23
TPM3-222ENST00000515609 ITPR3Q14573 2671 aa7.35□□□□□ -1.23
TPM3-222ENST00000515609 BAHCC1Q9P281 2608 aa7.35□□□□□ -1.23
TPM3-222ENST00000515609 PDZD2O15018 2839 aa7.35□□□□□ -1.23
TPM3-222ENST00000515609 HELTA6NFD8 242 aa7.34□□□□□ -1.23
TPM3-222ENST00000515609 M0R036 132 aa7.34□□□□□ -1.23
TPM3-222ENST00000515609 GP9P14770 177 aa7.34□□□□□ -1.23
TPM3-222ENST00000515609 CRYBB3P26998 211 aa7.34□□□□□ -1.23
TPM3-222ENST00000515609 CSN1S1P47710 185 aa7.34□□□□□ -1.23
TPM3-222ENST00000515609 CDX1P47902 265 aaPredicted RBP7.34□□□□□ -1.23
TPM3-222ENST00000515609 CNN1P51911 297 aaKnown RBP7.34□□□□□ -1.23
TPM3-222ENST00000515609 CD81P60033 236 aa7.34□□□□□ -1.23
TPM3-222ENST00000515609 SUMO1P63165 101 aaKnown RBP7.34□□□□□ -1.23
TPM3-222ENST00000515609 USF2Q15853 346 aaPredicted RBP7.34□□□□□ -1.23
TPM3-222ENST00000515609 RPEL1Q2QD12 228 aa7.34□□□□□ -1.23
TPM3-222ENST00000515609 Q6ZS46 218 aa7.34□□□□□ -1.23
TPM3-222ENST00000515609 MYOZ3Q8TDC0 251 aa7.34□□□□□ -1.23
TPM3-222ENST00000515609 C11orf52Q96A22 123 aa7.34□□□□□ -1.23
TPM3-222ENST00000515609 FXYD5Q96DB9 178 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms