RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 LINC00305Q7Z4B0 112 aa10.3□□□□□ -0.76
SMAD1-215ENST00000515385 TTC9CQ8N5M4 171 aa10.3□□□□□ -0.76
SMAD1-215ENST00000515385 SMRP1Q8NCR6 262 aa10.3□□□□□ -0.76
SMAD1-215ENST00000515385 U3KQK5 164 aa10.3□□□□□ -0.76
SMAD1-215ENST00000515385 PINLYPA6NC86 204 aa10.3□□□□□ -0.76
SMAD1-215ENST00000515385 SAA2P0DJI9 122 aaPredicted RBP10.3□□□□□ -0.76
SMAD1-215ENST00000515385 HLA-DRB4P13762 266 aa10.3□□□□□ -0.76
SMAD1-215ENST00000515385 MYOD1P15172 320 aa10.3□□□□□ -0.76
SMAD1-215ENST00000515385 WFDC2Q14508 124 aa10.3□□□□□ -0.76
SMAD1-215ENST00000515385 ABHD17BQ5VST6 288 aa10.3□□□□□ -0.76
SMAD1-215ENST00000515385 CXorf67Q86X51 503 aaPredicted RBP10.3□□□□□ -0.76
SMAD1-215ENST00000515385 TMEM116Q8NCL8 245 aa10.3□□□□□ -0.76
SMAD1-215ENST00000515385 IFI27L1Q96BM0 104 aa10.3□□□□□ -0.76
SMAD1-215ENST00000515385 FAM173AQ9BQD7 235 aa10.3□□□□□ -0.76
SMAD1-215ENST00000515385 SPANXA1Q9NS26 97 aa10.3□□□□□ -0.76
SMAD1-215ENST00000515385 CALYQ9NYX4 217 aa10.3□□□□□ -0.76
SMAD1-215ENST00000515385 HLA-DRB4X5D2U9 266 aa10.3□□□□□ -0.76
SMAD1-215ENST00000515385 MED12LQ86YW9 2145 aa10.3□□□□□ -0.76
SMAD1-215ENST00000515385 ASXL3Q9C0F0 2248 aa10.3□□□□□ -0.76
SMAD1-215ENST00000515385 NKX2-8O15522 239 aa10.29□□□□□ -0.76
SMAD1-215ENST00000515385 SUB1P53999 127 aaKnown RBP eCLIP10.29□□□□□ -0.76
SMAD1-215ENST00000515385 RPL32P62910 135 aaKnown RBP10.29□□□□□ -0.76
SMAD1-215ENST00000515385 TAL2Q16559 108 aa10.29□□□□□ -0.76
SMAD1-215ENST00000515385 LINC01559Q495D7 138 aa10.29□□□□□ -0.76
SMAD1-215ENST00000515385 ZNF562Q6V9R5 426 aa10.29□□□□□ -0.76
SMAD1-215ENST00000515385 Q6ZS92 163 aa10.29□□□□□ -0.76
SMAD1-215ENST00000515385 PCP2Q8IVA1 136 aa10.29□□□□□ -0.76
SMAD1-215ENST00000515385 OR10X1Q8NGY0 326 aa10.29□□□□□ -0.76
SMAD1-215ENST00000515385 KLF14Q8TD94 323 aaPredicted RBP10.29□□□□□ -0.76
SMAD1-215ENST00000515385 CITED2Q99967 270 aaPredicted RBP10.29□□□□□ -0.76
SMAD1-215ENST00000515385 CYSLTR1Q9Y271 337 aa10.29□□□□□ -0.76
SMAD1-215ENST00000515385 CHD7Q9P2D1 2997 aa10.29□□□□□ -0.76
SMAD1-215ENST00000515385 KBTBD11-OT1A0A1B0GTJ5 212 aa10.29□□□□□ -0.76
SMAD1-215ENST00000515385 OVOL3O00110 214 aa10.29□□□□□ -0.76
SMAD1-215ENST00000515385 TFF1P04155 84 aa10.29□□□□□ -0.76
SMAD1-215ENST00000515385 IFI27P40305 119 aaPredicted RBP10.29□□□□□ -0.76
SMAD1-215ENST00000515385 FXYD2P54710 66 aa10.29□□□□□ -0.76
SMAD1-215ENST00000515385 C1orf229Q6ZS94 237 aaPredicted RBP10.29□□□□□ -0.76
SMAD1-215ENST00000515385 Q86TA4 180 aa10.29□□□□□ -0.76
SMAD1-215ENST00000515385 YAE1D1Q9NRH1 226 aa10.29□□□□□ -0.76
SMAD1-215ENST00000515385 hADV38S2A0JD32 116 aa10.28□□□□□ -0.76
SMAD1-215ENST00000515385 IGLL5B9A064 214 aa10.28□□□□□ -0.76
SMAD1-215ENST00000515385 TMEM30BQ3MIR4 351 aa10.28□□□□□ -0.76
SMAD1-215ENST00000515385 GAGE13Q4V321 117 aa10.28□□□□□ -0.76
SMAD1-215ENST00000515385 ZCCHC24Q8N2G6 241 aaKnown RBP10.28□□□□□ -0.76
SMAD1-215ENST00000515385 SGK494Q96LW2 274 aa10.28□□□□□ -0.76
SMAD1-215ENST00000515385 CHAC1Q9BUX1 264 aa10.28□□□□□ -0.76
SMAD1-215ENST00000515385 C12orf49Q9H741 205 aa10.28□□□□□ -0.76
SMAD1-215ENST00000515385 NDUFA4L2Q9NRX3 87 aa10.28□□□□□ -0.76
SMAD1-215ENST00000515385 FBLL1A6NHQ2 334 aaKnown RBP10.27□□□□□ -0.76
SMAD1-215ENST00000515385 KLK10O43240 276 aa10.27□□□□□ -0.76
SMAD1-215ENST00000515385 CGB3P0DN86 165 aa10.27□□□□□ -0.76
SMAD1-215ENST00000515385 CGB7P0DN87 165 aa10.27□□□□□ -0.76
SMAD1-215ENST00000515385 CEND1Q8N111 149 aa10.27□□□□□ -0.76
SMAD1-215ENST00000515385 ATP6V0E2Q8NHE4 81 aa10.27□□□□□ -0.76
SMAD1-215ENST00000515385 RNF183Q96D59 192 aa10.27□□□□□ -0.76
SMAD1-215ENST00000515385 Q9H3A6 140 aa10.27□□□□□ -0.76
SMAD1-215ENST00000515385 OTORQ9NRC9 128 aa10.27□□□□□ -0.76
SMAD1-215ENST00000515385 F11RQ9Y624 299 aaKnown RBP10.27□□□□□ -0.76
SMAD1-215ENST00000515385 IGKV1D-37A0A075B6S9 117 aa10.27□□□□□ -0.77
SMAD1-215ENST00000515385 ARMS2P0C7Q2 107 aa10.27□□□□□ -0.77
SMAD1-215ENST00000515385 C8orf46Q8TAG6 207 aa10.27□□□□□ -0.77
SMAD1-215ENST00000515385 NPIPB3Q92617 1050 aa10.27□□□□□ -0.77
SMAD1-215ENST00000515385 RAB1BQ9H0U4 201 aa10.27□□□□□ -0.77
SMAD1-215ENST00000515385 C5orf42Q9H799 3197 aa10.27□□□□□ -0.77
SMAD1-215ENST00000515385 CELA3AP09093 270 aa10.26□□□□□ -0.77
SMAD1-215ENST00000515385 ETDBQ3ZM63 59 aa10.26□□□□□ -0.77
SMAD1-215ENST00000515385 C8orf86Q6ZUL3 223 aa10.26□□□□□ -0.77
SMAD1-215ENST00000515385 ORMDL3Q8N138 153 aa10.26□□□□□ -0.77
SMAD1-215ENST00000515385 PRELID3AQ96N28 172 aa10.26□□□□□ -0.77
SMAD1-215ENST00000515385 UNC80Q8N2C7 3258 aa10.26□□□□□ -0.77
SMAD1-215ENST00000515385 IGHG4P01861 327 aa10.26□□□□□ -0.77
SMAD1-215ENST00000515385 THBDP07204 575 aa10.26□□□□□ -0.77
SMAD1-215ENST00000515385 PF4V1P10720 104 aa10.26□□□□□ -0.77
SMAD1-215ENST00000515385 HOXB4P17483 251 aaPredicted RBP10.26□□□□□ -0.77
SMAD1-215ENST00000515385 GATA3P23771 443 aa10.26□□□□□ -0.77
SMAD1-215ENST00000515385 PAX8Q06710 450 aa10.26□□□□□ -0.77
SMAD1-215ENST00000515385 KLRD1Q13241 179 aa10.26□□□□□ -0.77
SMAD1-215ENST00000515385 OSR1Q8TAX0 266 aaPredicted RBP10.26□□□□□ -0.77
SMAD1-215ENST00000515385 SRSF12Q8WXF0 261 aaKnown RBP10.26□□□□□ -0.77
SMAD1-215ENST00000515385 VCX2Q9H322 139 aa10.26□□□□□ -0.77
SMAD1-215ENST00000515385 ZMAT4Q9H898 229 aa10.26□□□□□ -0.77
SMAD1-215ENST00000515385 NHP2Q9NX24 153 aaKnown RBP10.26□□□□□ -0.77
SMAD1-215ENST00000515385 SSUH2Q9Y2M2 353 aa10.26□□□□□ -0.77
SMAD1-215ENST00000515385 LAMA3Q16787 3333 aa10.25□□□□□ -0.77
SMAD1-215ENST00000515385 IGKV1D-17A0A075B6S4 117 aa10.25□□□□□ -0.77
SMAD1-215ENST00000515385 LY6G6EA0A0G2JKS1 128 aa10.25□□□□□ -0.77
SMAD1-215ENST00000515385 EPOPA6NHQ4 379 aa10.25□□□□□ -0.77
SMAD1-215ENST00000515385 TIMM8AO60220 97 aaPredicted RBP10.25□□□□□ -0.77
SMAD1-215ENST00000515385 NDUFS7O75251 213 aa10.25□□□□□ -0.77
SMAD1-215ENST00000515385 GP9P14770 177 aa10.25□□□□□ -0.77
SMAD1-215ENST00000515385 Q0VFX4 171 aa10.25□□□□□ -0.77
SMAD1-215ENST00000515385 RITA1Q96K30 269 aa10.25□□□□□ -0.77
SMAD1-215ENST00000515385 UFC1Q9Y3C8 167 aa10.25□□□□□ -0.77
SMAD1-215ENST00000515385 U3KQA8 63 aa10.25□□□□□ -0.77
SMAD1-215ENST00000515385 SRRM5B3KS81 715 aa10.24□□□□□ -0.77
SMAD1-215ENST00000515385 IGHV3-13P01766 116 aa10.24□□□□□ -0.77
SMAD1-215ENST00000515385 FAM106CPP0CH98 169 aa10.24□□□□□ -0.77
SMAD1-215ENST00000515385 SAA1P0DJI8 122 aaPredicted RBP10.24□□□□□ -0.77
SMAD1-215ENST00000515385 EVI2AP22794 236 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms