RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 SRP19P09132 144 aaKnown RBP7.7□□□□□ -1.18
TPM3-221ENST00000513769 GCHFRP30047 84 aa7.7□□□□□ -1.18
TPM3-221ENST00000513769 SRP14P37108 136 aaKnown RBP7.7□□□□□ -1.18
TPM3-221ENST00000513769 SLC35B1P78383 322 aa7.7□□□□□ -1.18
TPM3-221ENST00000513769 RHOGP84095 191 aa7.7□□□□□ -1.18
TPM3-221ENST00000513769 MEF2BQ02080 365 aaPredicted RBP7.7□□□□□ -1.18
TPM3-221ENST00000513769 ICAM4Q14773 271 aa7.7□□□□□ -1.18
TPM3-221ENST00000513769 LINC00305Q7Z4B0 112 aa7.7□□□□□ -1.18
TPM3-221ENST00000513769 NARS2Q96I59 477 aaKnown RBP7.7□□□□□ -1.18
TPM3-221ENST00000513769 TCEAL7Q9BRU2 100 aa7.7□□□□□ -1.18
TPM3-221ENST00000513769 OR51M1Q9H341 326 aa7.7□□□□□ -1.18
TPM3-221ENST00000513769 F6UZH7 168 aa7.69□□□□□ -1.18
TPM3-221ENST00000513769 HOXA3O43365 443 aaPredicted RBP7.69□□□□□ -1.18
TPM3-221ENST00000513769 IGHV3-48P01763 117 aa7.69□□□□□ -1.18
TPM3-221ENST00000513769 ELANEP08246 267 aa7.69□□□□□ -1.18
TPM3-221ENST00000513769 SFTA3P0C7M3 94 aa7.69□□□□□ -1.18
TPM3-221ENST00000513769 ORM2P19652 201 aa7.69□□□□□ -1.18
TPM3-221ENST00000513769 GATA2P23769 480 aaPredicted RBP7.69□□□□□ -1.18
TPM3-221ENST00000513769 FGF8P55075 233 aaPredicted RBP7.69□□□□□ -1.18
TPM3-221ENST00000513769 RELQ04864 619 aaPredicted RBP7.69□□□□□ -1.18
TPM3-221ENST00000513769 HAGHQ16775 308 aa7.69□□□□□ -1.18
TPM3-221ENST00000513769 ECSCRQ19T08 205 aa7.69□□□□□ -1.18
TPM3-221ENST00000513769 Q56UQ5 140 aa7.69□□□□□ -1.18
TPM3-221ENST00000513769 GCSAMLQ5JQS6 135 aa7.69□□□□□ -1.18
TPM3-221ENST00000513769 C9orf152Q5JTZ5 239 aa7.69□□□□□ -1.18
TPM3-221ENST00000513769 TEX38Q6PEX7 206 aa7.69□□□□□ -1.18
TPM3-221ENST00000513769 ZNF600Q6ZNG1 722 aa7.69□□□□□ -1.18
TPM3-221ENST00000513769 SSX7Q7RTT5 188 aa7.69□□□□□ -1.18
TPM3-221ENST00000513769 RPUSD4Q96CM3 377 aaKnown RBP7.69□□□□□ -1.18
TPM3-221ENST00000513769 LINC00052Q96N35 136 aa7.69□□□□□ -1.18
TPM3-221ENST00000513769 SLC25A22Q9H936 323 aa7.69□□□□□ -1.18
TPM3-221ENST00000513769 YAE1D1Q9NRH1 226 aa7.69□□□□□ -1.18
TPM3-221ENST00000513769 TMEM14CQ9P0S9 112 aa7.69□□□□□ -1.18
TPM3-221ENST00000513769 HIGD1AQ9Y241 93 aa7.69□□□□□ -1.18
TPM3-221ENST00000513769 FBN3Q75N90 2809 aa7.68□□□□□ -1.18
TPM3-221ENST00000513769 B4DEV8 164 aa7.68□□□□□ -1.18
TPM3-221ENST00000513769 C9JQL5 133 aa7.68□□□□□ -1.18
TPM3-221ENST00000513769 APOC3P02656 99 aa7.68□□□□□ -1.18
TPM3-221ENST00000513769 TRGV3P03979 118 aa7.68□□□□□ -1.18
TPM3-221ENST00000513769 ARL14EPLP0DKL9 152 aa7.68□□□□□ -1.18
TPM3-221ENST00000513769 CFHR3Q02985 330 aa7.68□□□□□ -1.18
TPM3-221ENST00000513769 KRTAP1-1Q07627 177 aa7.68□□□□□ -1.18
TPM3-221ENST00000513769 PNRC1Q12796 327 aaPredicted RBP7.68□□□□□ -1.18
TPM3-221ENST00000513769 TIGITQ495A1 244 aa7.68□□□□□ -1.18
TPM3-221ENST00000513769 MIR17HGQ75NE6 70 aa7.68□□□□□ -1.18
TPM3-221ENST00000513769 CCDC28AQ8IWP9 274 aa7.68□□□□□ -1.18
TPM3-221ENST00000513769 LYPD1Q8N2G4 141 aa7.68□□□□□ -1.18
TPM3-221ENST00000513769 ARL6IP6Q8N6S5 226 aa7.68□□□□□ -1.18
TPM3-221ENST00000513769 OR1B1Q8NGR6 318 aa7.68□□□□□ -1.18
TPM3-221ENST00000513769 RXFP4Q8TDU9 374 aa7.68□□□□□ -1.18
TPM3-221ENST00000513769 FAM167A-AS1Q96KT0 104 aa7.68□□□□□ -1.18
TPM3-221ENST00000513769 UHRF2Q96PU4 802 aa7.68□□□□□ -1.18
TPM3-221ENST00000513769 JMJD8Q96S16 334 aa7.68□□□□□ -1.18
TPM3-221ENST00000513769 TMPRSS5Q9H3S3 457 aa7.68□□□□□ -1.18
TPM3-221ENST00000513769 CDC42EP3Q9UKI2 254 aa7.68□□□□□ -1.18
TPM3-221ENST00000513769 PRELID1Q9Y255 219 aa7.68□□□□□ -1.18
TPM3-221ENST00000513769 ABCA1O95477 2261 aa7.67□□□□□ -1.18
TPM3-221ENST00000513769 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.67□□□□□ -1.18
TPM3-221ENST00000513769 IGHV3-21A0A0B4J1V1 117 aa7.67□□□□□ -1.18
TPM3-221ENST00000513769 BMPR1BO00238 502 aa7.67□□□□□ -1.18
TPM3-221ENST00000513769 PAGE4O60829 102 aa7.67□□□□□ -1.18
TPM3-221ENST00000513769 ATF4P18848 351 aaPredicted RBP7.67□□□□□ -1.18
TPM3-221ENST00000513769 PSMB8P28062 276 aa7.67□□□□□ -1.18
TPM3-221ENST00000513769 CD81P60033 236 aa7.67□□□□□ -1.18
TPM3-221ENST00000513769 FOXE3Q13461 319 aa7.67□□□□□ -1.18
TPM3-221ENST00000513769 C1orf194Q5T5A4 169 aa7.67□□□□□ -1.18
TPM3-221ENST00000513769 ZNF343Q6P1L6 599 aa7.67□□□□□ -1.18
TPM3-221ENST00000513769 BPIFA4PQ86YQ2 179 aa7.67□□□□□ -1.18
TPM3-221ENST00000513769 SIGLECL1Q8N7X8 197 aa7.67□□□□□ -1.18
TPM3-221ENST00000513769 RNF152Q8N8N0 203 aa7.67□□□□□ -1.18
TPM3-221ENST00000513769 RNF125Q96EQ8 232 aa7.67□□□□□ -1.18
TPM3-221ENST00000513769 GPR82Q96P67 336 aa7.67□□□□□ -1.18
TPM3-221ENST00000513769 SHANK2-AS3Q9BTD1 123 aa7.67□□□□□ -1.18
TPM3-221ENST00000513769 PAXXQ9BUH6 204 aa7.67□□□□□ -1.18
TPM3-221ENST00000513769 SLC25A39Q9BZJ4 359 aaPredicted RBP7.67□□□□□ -1.18
TPM3-221ENST00000513769 FLNAP21333 2647 aaKnown RBP7.66□□□□□ -1.18
TPM3-221ENST00000513769 A0A1B0GV50 99 aa7.66□□□□□ -1.18
TPM3-221ENST00000513769 MDFIC2A0A1B0GVS7 189 aa7.66□□□□□ -1.18
TPM3-221ENST00000513769 FAM74A7A6NL05 159 aa7.66□□□□□ -1.18
TPM3-221ENST00000513769 C11orf94C9JXX5 98 aa7.66□□□□□ -1.18
TPM3-221ENST00000513769 HMGB3O15347 200 aaKnown RBP7.66□□□□□ -1.18
TPM3-221ENST00000513769 TGOLN2O43493 480 aa7.66□□□□□ -1.18
TPM3-221ENST00000513769 OR7C2O60412 319 aa7.66□□□□□ -1.18
TPM3-221ENST00000513769 LY6G6DO95868 133 aa7.66□□□□□ -1.18
TPM3-221ENST00000513769 NBEAP1P0C6P0 100 aa7.66□□□□□ -1.18
TPM3-221ENST00000513769 HIST1H1EP10412 219 aaKnown RBP7.66□□□□□ -1.18
TPM3-221ENST00000513769 DEFA5Q01523 94 aa7.66□□□□□ -1.18
TPM3-221ENST00000513769 C19orf35Q6ZS72 473 aa7.66□□□□□ -1.18
TPM3-221ENST00000513769 ZNF418Q8TF45 676 aaPredicted RBP7.66□□□□□ -1.18
TPM3-221ENST00000513769 MS4A10Q96PG2 267 aa7.66□□□□□ -1.18
TPM3-221ENST00000513769 NIPSNAP3BQ9BS92 247 aa7.66□□□□□ -1.18
TPM3-221ENST00000513769 SLC25A2Q9BXI2 301 aa7.66□□□□□ -1.18
TPM3-221ENST00000513769 TMEM231Q9H6L2 316 aa7.66□□□□□ -1.18
TPM3-221ENST00000513769 TUBA4BQ9H853 241 aa7.66□□□□□ -1.18
TPM3-221ENST00000513769 TMEM242Q9NWH2 141 aa7.66□□□□□ -1.18
TPM3-221ENST00000513769 DOK5Q9P104 306 aa7.66□□□□□ -1.18
TPM3-221ENST00000513769 OR2T8A6NH00 312 aa7.65□□□□□ -1.18
TPM3-221ENST00000513769 ZNF98A6NK75 572 aa7.65□□□□□ -1.18
TPM3-221ENST00000513769 NDUFA4O00483 81 aa7.65□□□□□ -1.18
TPM3-221ENST00000513769 IL4P05112 153 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms