RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 TAS2R60P59551 318 aa6.54□□□□□ -1.36
RNF4-220ENST00000513578 ZNF674Q2M3X9 581 aa6.54□□□□□ -1.36
RNF4-220ENST00000513578 LINC01551Q86U37 167 aa6.54□□□□□ -1.36
RNF4-220ENST00000513578 FAM223AQ8IWN6 122 aa6.54□□□□□ -1.36
RNF4-220ENST00000513578 TEX29Q8N6K0 151 aa6.54□□□□□ -1.36
RNF4-220ENST00000513578 OR5R1Q8NH85 324 aa6.54□□□□□ -1.36
RNF4-220ENST00000513578 C2CD4CQ8TF44 421 aa6.54□□□□□ -1.36
RNF4-220ENST00000513578 RNF125Q96EQ8 232 aa6.54□□□□□ -1.36
RNF4-220ENST00000513578 SLC25A39Q9BZJ4 359 aaPredicted RBP6.54□□□□□ -1.36
RNF4-220ENST00000513578 GSX1Q9H4S2 264 aaPredicted RBP6.54□□□□□ -1.36
RNF4-220ENST00000513578 TMA7Q9Y2S6 64 aaKnown RBP6.54□□□□□ -1.36
RNF4-220ENST00000513578 TACC2O95359 2948 aa6.53□□□□□ -1.36
RNF4-220ENST00000513578 CSMD1Q96PZ7 3565 aa6.53□□□□□ -1.36
RNF4-220ENST00000513578 TRBV24-1A0A075B6N3 115 aa6.53□□□□□ -1.36
RNF4-220ENST00000513578 SCO2A0A1W2PP80 73 aa6.53□□□□□ -1.36
RNF4-220ENST00000513578 LINC01548A6NM66 108 aa6.53□□□□□ -1.36
RNF4-220ENST00000513578 GGTLC3B5MD39 225 aa6.53□□□□□ -1.36
RNF4-220ENST00000513578 PPP1R2P9O14990 202 aa6.53□□□□□ -1.36
RNF4-220ENST00000513578 TGOLN2O43493 480 aa6.53□□□□□ -1.36
RNF4-220ENST00000513578 S100A9P06702 114 aaKnown RBP6.53□□□□□ -1.36
RNF4-220ENST00000513578 NBEAP1P0C6P0 100 aa6.53□□□□□ -1.36
RNF4-220ENST00000513578 PYYP10082 97 aa6.53□□□□□ -1.36
RNF4-220ENST00000513578 PPIFP30405 207 aaKnown RBP6.53□□□□□ -1.36
RNF4-220ENST00000513578 AKR1C3P42330 323 aa6.53□□□□□ -1.36
RNF4-220ENST00000513578 LYZP61626 148 aa6.53□□□□□ -1.36
RNF4-220ENST00000513578 SUMO1P63165 101 aaKnown RBP6.53□□□□□ -1.36
RNF4-220ENST00000513578 ELOBQ15370 118 aa6.53□□□□□ -1.36
RNF4-220ENST00000513578 ADIRFQ15847 76 aa6.53□□□□□ -1.36
RNF4-220ENST00000513578 ECSCRQ19T08 205 aa6.53□□□□□ -1.36
RNF4-220ENST00000513578 Q56UQ5 140 aa6.53□□□□□ -1.36
RNF4-220ENST00000513578 CYB5R2Q6BCY4 276 aa6.53□□□□□ -1.36
RNF4-220ENST00000513578 TMEM219Q86XT9 240 aa6.53□□□□□ -1.36
RNF4-220ENST00000513578 C1QL4Q86Z23 238 aa6.53□□□□□ -1.36
RNF4-220ENST00000513578 ISOC2Q96AB3 205 aa6.53□□□□□ -1.36
RNF4-220ENST00000513578 EEF1AKMT3Q96AZ1 226 aa6.53□□□□□ -1.36
RNF4-220ENST00000513578 IMMP2LQ96T52 175 aa6.53□□□□□ -1.36
RNF4-220ENST00000513578 PYGO2Q9BRQ0 406 aa6.53□□□□□ -1.36
RNF4-220ENST00000513578 ELOVL1Q9BW60 279 aa6.53□□□□□ -1.36
RNF4-220ENST00000513578 CENPEQ02224 2701 aa6.53□□□□□ -1.36
RNF4-220ENST00000513578 OTOGQ6ZRI0 2925 aa6.53□□□□□ -1.36
RNF4-220ENST00000513578 TRBV20OR9-2A0A075B6H5 130 aa6.52□□□□□ -1.37
RNF4-220ENST00000513578 TMEM89A2RUT3 159 aa6.52□□□□□ -1.37
RNF4-220ENST00000513578 HELTA6NFD8 242 aa6.52□□□□□ -1.37
RNF4-220ENST00000513578 G3V318 75 aa6.52□□□□□ -1.37
RNF4-220ENST00000513578 AP4M1O00189 453 aa6.52□□□□□ -1.37
RNF4-220ENST00000513578 MRPS12O15235 138 aaKnown RBP6.52□□□□□ -1.37
RNF4-220ENST00000513578 IL4P05112 153 aa6.52□□□□□ -1.37
RNF4-220ENST00000513578 CRYBA1P05813 215 aa6.52□□□□□ -1.37
RNF4-220ENST00000513578 PFN1P07737 140 aaKnown RBP6.52□□□□□ -1.37
RNF4-220ENST00000513578 OR10J4P0C629 311 aa6.52□□□□□ -1.37
RNF4-220ENST00000513578 CRYBB3P26998 211 aa6.52□□□□□ -1.37
RNF4-220ENST00000513578 IER3P46695 156 aa6.52□□□□□ -1.37
RNF4-220ENST00000513578 RAB9AP51151 201 aa6.52□□□□□ -1.37
RNF4-220ENST00000513578 RHOGP84095 191 aa6.52□□□□□ -1.37
RNF4-220ENST00000513578 FLI1Q01543 452 aaPredicted RBP6.52□□□□□ -1.37
RNF4-220ENST00000513578 KIAA0141Q14154 515 aaPredicted RBP6.52□□□□□ -1.37
RNF4-220ENST00000513578 DEFB112Q30KQ8 113 aa6.52□□□□□ -1.37
RNF4-220ENST00000513578 C15orf32Q32M92 178 aa6.52□□□□□ -1.37
RNF4-220ENST00000513578 HIST2H2BCQ6DN03 193 aa6.52□□□□□ -1.37
RNF4-220ENST00000513578 ZNF600Q6ZNG1 722 aa6.52□□□□□ -1.37
RNF4-220ENST00000513578 ZNF329Q86UD4 541 aa6.52□□□□□ -1.37
RNF4-220ENST00000513578 BPIFA4PQ86YQ2 179 aa6.52□□□□□ -1.37
RNF4-220ENST00000513578 LYPD1Q8N2G4 141 aa6.52□□□□□ -1.37
RNF4-220ENST00000513578 FAM24BQ8N5W8 94 aa6.52□□□□□ -1.37
RNF4-220ENST00000513578 ARL6IP6Q8N6S5 226 aa6.52□□□□□ -1.37
RNF4-220ENST00000513578 SMIM12Q96EX1 92 aa6.52□□□□□ -1.37
RNF4-220ENST00000513578 ZNF414Q96IQ9 312 aa6.52□□□□□ -1.37
RNF4-220ENST00000513578 USMG5Q96IX5 58 aa6.52□□□□□ -1.37
RNF4-220ENST00000513578 Q96MF0 132 aa6.52□□□□□ -1.37
RNF4-220ENST00000513578 DERL1Q9BUN8 251 aa6.52□□□□□ -1.37
RNF4-220ENST00000513578 CDC42EP3Q9UKI2 254 aa6.52□□□□□ -1.37
RNF4-220ENST00000513578 KLF12Q9Y4X4 402 aa6.52□□□□□ -1.37
RNF4-220ENST00000513578 SOX21Q9Y651 276 aaPredicted RBP6.52□□□□□ -1.37
RNF4-220ENST00000513578 TRBV6-1A0A0K0K1D8 114 aa6.51□□□□□ -1.37
RNF4-220ENST00000513578 LOC105371267A0A1B0GV96 52 aa6.51□□□□□ -1.37
RNF4-220ENST00000513578 ZNF98A6NK75 572 aa6.51□□□□□ -1.37
RNF4-220ENST00000513578 H7BYZ3 331 aa6.51□□□□□ -1.37
RNF4-220ENST00000513578 IGLC2P0DOY2 106 aa6.51□□□□□ -1.37
RNF4-220ENST00000513578 RAB5AP20339 215 aa6.51□□□□□ -1.37
RNF4-220ENST00000513578 ADMP35318 185 aa6.51□□□□□ -1.37
RNF4-220ENST00000513578 SRP14P37108 136 aaKnown RBP6.51□□□□□ -1.37
RNF4-220ENST00000513578 RPL35P42766 123 aaKnown RBP6.51□□□□□ -1.37
RNF4-220ENST00000513578 CFHR3Q02985 330 aa6.51□□□□□ -1.37
RNF4-220ENST00000513578 ATP5G2Q06055 141 aa6.51□□□□□ -1.37
RNF4-220ENST00000513578 PDE6HQ13956 83 aa6.51□□□□□ -1.37
RNF4-220ENST00000513578 USF2Q15853 346 aaPredicted RBP6.51□□□□□ -1.37
RNF4-220ENST00000513578 LY6EQ16553 131 aa6.51□□□□□ -1.37
RNF4-220ENST00000513578 FAM209BQ5JX69 171 aa6.51□□□□□ -1.37
RNF4-220ENST00000513578 Q6YL49 198 aa6.51□□□□□ -1.37
RNF4-220ENST00000513578 C5orf17Q8NAS9 161 aa6.51□□□□□ -1.37
RNF4-220ENST00000513578 OCC1Q8TAD7 63 aa6.51□□□□□ -1.37
RNF4-220ENST00000513578 BTF3L4Q96K17 158 aa6.51□□□□□ -1.37
RNF4-220ENST00000513578 IGF2BP2-AS1Q96M15 143 aa6.51□□□□□ -1.37
RNF4-220ENST00000513578 FOXC2Q99958 501 aa6.51□□□□□ -1.37
RNF4-220ENST00000513578 OTORQ9NRC9 128 aa6.51□□□□□ -1.37
RNF4-220ENST00000513578 EPDR1Q9UM22 224 aa6.51□□□□□ -1.37
RNF4-220ENST00000513578 TRAV9-1A0A075B6T8 112 aa6.5□□□□□ -1.37
RNF4-220ENST00000513578 SH2D7A6NKC9 451 aaPredicted RBP6.5□□□□□ -1.37
RNF4-220ENST00000513578 PEX7O00628 323 aa6.5□□□□□ -1.37
RNF4-220ENST00000513578 ZNF253O75346 499 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms