RNA–Protein interactions for RNA: ENST00000510884.5

NUP54-210, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-210ENST00000510884 MUC21A0A140T8X8 626 aa3.96□□□□□ -1.78
NUP54-210ENST00000510884 DPRXA6NFQ7 191 aa3.96□□□□□ -1.78
NUP54-210ENST00000510884 FAM24AA6NFZ4 105 aa3.96□□□□□ -1.78
NUP54-210ENST00000510884 KNCNA6PVL3 124 aa3.96□□□□□ -1.78
NUP54-210ENST00000510884 LY6LH3BQJ8 138 aa3.96□□□□□ -1.78
NUP54-210ENST00000510884 EFNA2O43921 213 aa3.96□□□□□ -1.78
NUP54-210ENST00000510884 TRACP01848 142 aa3.96□□□□□ -1.78
NUP54-210ENST00000510884 HLA-DPB1P04440 258 aa3.96□□□□□ -1.78
NUP54-210ENST00000510884 FGF6P10767 208 aa3.96□□□□□ -1.78
NUP54-210ENST00000510884 KLK7P49862 253 aa3.96□□□□□ -1.78
NUP54-210ENST00000510884 CLDN17P56750 224 aa3.96□□□□□ -1.78
NUP54-210ENST00000510884 TAS2R45P59539 299 aa3.96□□□□□ -1.78
NUP54-210ENST00000510884 SSBP1Q04837 148 aaKnown RBP3.96□□□□□ -1.78
NUP54-210ENST00000510884 MUC21Q5SSG8 566 aa3.96□□□□□ -1.78
NUP54-210ENST00000510884 FKBP1CQ5VVH2 108 aa3.96□□□□□ -1.78
NUP54-210ENST00000510884 Q6ZRG5 221 aa3.96□□□□□ -1.78
NUP54-210ENST00000510884 AAED1Q7RTV5 226 aa3.96□□□□□ -1.78
NUP54-210ENST00000510884 TRAPPC6BQ86SZ2 158 aa3.96□□□□□ -1.78
NUP54-210ENST00000510884 RPS4Y2Q8TD47 263 aa3.96□□□□□ -1.78
NUP54-210ENST00000510884 DLX4Q92988 240 aaPredicted RBP3.96□□□□□ -1.78
NUP54-210ENST00000510884 BORCS8Q96FH0 119 aa3.96□□□□□ -1.78
NUP54-210ENST00000510884 OVOL2Q9BRP0 275 aa3.96□□□□□ -1.78
NUP54-210ENST00000510884 TVP23BQ9NYZ1 205 aa3.96□□□□□ -1.78
NUP54-210ENST00000510884 NCOR2Q9Y618 2525 aa3.96□□□□□ -1.78
NUP54-210ENST00000510884 ADGRB1O14514 1584 aa3.96□□□□□ -1.78
NUP54-210ENST00000510884 UBR2Q8IWV8 1755 aa3.95□□□□□ -1.78
NUP54-210ENST00000510884 ALS2Q96Q42 1657 aa3.95□□□□□ -1.78
NUP54-210ENST00000510884 TRAV27A0A087WT01 109 aa3.95□□□□□ -1.78
NUP54-210ENST00000510884 TRAV14DV4A0A0A6YYC5 116 aa3.95□□□□□ -1.78
NUP54-210ENST00000510884 TRAV4A0A0B4J268 109 aa3.95□□□□□ -1.78
NUP54-210ENST00000510884 SYS1-DBNDD2H3BUS1 97 aa3.95□□□□□ -1.78
NUP54-210ENST00000510884 SSSCA1O60232 199 aa3.95□□□□□ -1.78
NUP54-210ENST00000510884 PTHP01270 115 aa3.95□□□□□ -1.78
NUP54-210ENST00000510884 PYYP10082 97 aa3.95□□□□□ -1.78
NUP54-210ENST00000510884 GP1BBP13224 206 aa3.95□□□□□ -1.78
NUP54-210ENST00000510884 ELK1P19419 428 aa3.95□□□□□ -1.78
NUP54-210ENST00000510884 UBE2E1P51965 193 aa3.95□□□□□ -1.78
NUP54-210ENST00000510884 APOC4P55056 127 aa3.95□□□□□ -1.78
NUP54-210ENST00000510884 PPP1CAP62136 330 aa3.95□□□□□ -1.78
NUP54-210ENST00000510884 HBG1P69891 147 aa3.95□□□□□ -1.78
NUP54-210ENST00000510884 HBG2P69892 147 aa3.95□□□□□ -1.78
NUP54-210ENST00000510884 RTL8BQ17RB0 113 aa3.95□□□□□ -1.78
NUP54-210ENST00000510884 MPV17LQ2QL34 196 aa3.95□□□□□ -1.78
NUP54-210ENST00000510884 SPRNQ5BIV9 151 aa3.95□□□□□ -1.78
NUP54-210ENST00000510884 MRPL2Q5T653 305 aaKnown RBP3.95□□□□□ -1.78
NUP54-210ENST00000510884 LINC01545Q5VT33 79 aa3.95□□□□□ -1.78
NUP54-210ENST00000510884 PRR15Q8IV56 129 aa3.95□□□□□ -1.78
NUP54-210ENST00000510884 EXOC3-AS1Q8N2X6 119 aa3.95□□□□□ -1.78
NUP54-210ENST00000510884 IL1F10Q8WWZ1 152 aa3.95□□□□□ -1.78
NUP54-210ENST00000510884 DNAJA3Q96EY1 480 aa3.95□□□□□ -1.78
NUP54-210ENST00000510884 DPH3Q96FX2 82 aa3.95□□□□□ -1.78
NUP54-210ENST00000510884 UBE2E2Q96LR5 201 aa3.95□□□□□ -1.78
NUP54-210ENST00000510884 C1orf147Q96MC9 270 aaPredicted RBP3.95□□□□□ -1.78
NUP54-210ENST00000510884 APOOQ9BUR5 198 aa3.95□□□□□ -1.78
NUP54-210ENST00000510884 BCL2L10Q9HD36 194 aa3.95□□□□□ -1.78
NUP54-210ENST00000510884 ABRACLQ9P1F3 81 aa3.95□□□□□ -1.78
NUP54-210ENST00000510884 CTSZQ9UBR2 303 aa3.95□□□□□ -1.78
NUP54-210ENST00000510884 XIRP2A4UGR9 3374 aa3.95□□□□□ -1.78
NUP54-210ENST00000510884 DOCK2Q92608 1830 aa3.95□□□□□ -1.78
NUP54-210ENST00000510884 ACACBO00763 2458 aa3.94□□□□□ -1.78
NUP54-210ENST00000510884 TRAV8-2A0A0B4J237 113 aa3.94□□□□□ -1.78
NUP54-210ENST00000510884 TRAV13-1A0A0B4J241 112 aa3.94□□□□□ -1.78
NUP54-210ENST00000510884 TRAV8-4A0A0B4J246 113 aa3.94□□□□□ -1.78
NUP54-210ENST00000510884 H3BUT2 72 aa3.94□□□□□ -1.78
NUP54-210ENST00000510884 LYZL6O75951 148 aa3.94□□□□□ -1.78
NUP54-210ENST00000510884 NDUFB2O95178 105 aa3.94□□□□□ -1.78
NUP54-210ENST00000510884 ZNF688P0C7X2 276 aa3.94□□□□□ -1.78
NUP54-210ENST00000510884 P2RX1P51575 399 aa3.94□□□□□ -1.78
NUP54-210ENST00000510884 FOXA3P55318 350 aaPredicted RBP3.94□□□□□ -1.78
NUP54-210ENST00000510884 DAD1P61803 113 aa3.94□□□□□ -1.78
NUP54-210ENST00000510884 ZNF85Q03923 595 aa3.94□□□□□ -1.78
NUP54-210ENST00000510884 PLPP4Q5VZY2 271 aa3.94□□□□□ -1.78
NUP54-210ENST00000510884 Q6ZVH6 145 aa3.94□□□□□ -1.78
NUP54-210ENST00000510884 ZNF571Q7Z3V5 609 aaPredicted RBP3.94□□□□□ -1.78
NUP54-210ENST00000510884 LHFPL1Q86WI0 220 aa3.94□□□□□ -1.78
NUP54-210ENST00000510884 MSRB3Q8IXL7 192 aa3.94□□□□□ -1.78
NUP54-210ENST00000510884 NPWQ8N729 165 aa3.94□□□□□ -1.78
NUP54-210ENST00000510884 OR52P1PQ8NH57 321 aa3.94□□□□□ -1.78
NUP54-210ENST00000510884 MRPL30Q8TCC3 161 aaKnown RBP3.94□□□□□ -1.78
NUP54-210ENST00000510884 POLR2J2Q9GZM3 115 aaKnown RBP3.94□□□□□ -1.78
NUP54-210ENST00000510884 LIME1Q9H400 295 aa3.94□□□□□ -1.78
NUP54-210ENST00000510884 GLIPR2Q9H4G4 154 aa3.94□□□□□ -1.78
NUP54-210ENST00000510884 PDFQ9HBH1 243 aa3.94□□□□□ -1.78
NUP54-210ENST00000510884 C21orf62Q9NYP8 219 aa3.94□□□□□ -1.78
NUP54-210ENST00000510884 MTFP1Q9UDX5 166 aa3.94□□□□□ -1.78
NUP54-210ENST00000510884 C19orf25Q9UFG5 118 aaPredicted RBP3.94□□□□□ -1.78
NUP54-210ENST00000510884 IL36AQ9UHA7 158 aa3.94□□□□□ -1.78
NUP54-210ENST00000510884 ASPMQ8IZT6 3477 aa3.94□□□□□ -1.78
NUP54-210ENST00000510884 RGPD2P0DJD1 1756 aa3.94□□□□□ -1.78
NUP54-210ENST00000510884 ATAD5Q96QE3 1844 aa3.93□□□□□ -1.78
NUP54-210ENST00000510884 TRAV12-2A0A075B6T6 113 aa3.93□□□□□ -1.78
NUP54-210ENST00000510884 TRBV7-6A0A0J9YX20 115 aa3.93□□□□□ -1.78
NUP54-210ENST00000510884 FAM236AA0A1B0GUQ0 79 aa3.93□□□□□ -1.78
NUP54-210ENST00000510884 FAM236BA0A1B0GV22 79 aa3.93□□□□□ -1.78
NUP54-210ENST00000510884 K7N7A8 449 aa3.93□□□□□ -1.78
NUP54-210ENST00000510884 CDX4O14627 284 aaPredicted RBP3.93□□□□□ -1.78
NUP54-210ENST00000510884 RBP4P02753 201 aa3.93□□□□□ -1.78
NUP54-210ENST00000510884 LGALS2P05162 132 aa3.93□□□□□ -1.78
NUP54-210ENST00000510884 DUTP33316 252 aaKnown RBP3.93□□□□□ -1.78
NUP54-210ENST00000510884 CXCL5P42830 114 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms