RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 RNF125Q96EQ8 232 aa6.98□□□□□ -1.29
HTT-208ENST00000510626 FRMPD3Q5JV73 1810 aa6.98□□□□□ -1.29
HTT-208ENST00000510626 PLXNA4Q9HCM2 1894 aa6.98□□□□□ -1.29
HTT-208ENST00000510626 SMIM27A0A1W2PRY6 76 aa6.98□□□□□ -1.29
HTT-208ENST00000510626 TIMM23O14925 209 aa6.98□□□□□ -1.29
HTT-208ENST00000510626 YPEL3P61236 119 aaPredicted RBP6.98□□□□□ -1.29
HTT-208ENST00000510626 FAM74A4Q5TZK3 123 aa6.98□□□□□ -1.29
HTT-208ENST00000510626 HTN1P15515 57 aa6.98□□□□□ -1.29
HTT-208ENST00000510626 PRSS53Q2L4Q9 553 aa6.98□□□□□ -1.29
HTT-208ENST00000510626 TMEM52Q8NDY8 209 aa6.98□□□□□ -1.29
HTT-208ENST00000510626 C9orf50Q5SZB4 431 aa6.98□□□□□ -1.29
HTT-208ENST00000510626 FAM219BQ5XKK7 198 aa6.98□□□□□ -1.29
HTT-208ENST00000510626 ADAMTSL5Q6ZMM2 481 aa6.98□□□□□ -1.29
HTT-208ENST00000510626 OOSP1A8MZH6 123 aa6.98□□□□□ -1.29
HTT-208ENST00000510626 KLK10O43240 276 aa6.98□□□□□ -1.29
HTT-208ENST00000510626 COX8AP10176 69 aa6.98□□□□□ -1.29
HTT-208ENST00000510626 GAS1P54826 345 aa6.98□□□□□ -1.29
HTT-208ENST00000510626 ST6GALNAC6Q969X2 333 aa6.98□□□□□ -1.29
HTT-208ENST00000510626 SIGLEC12Q96PQ1 595 aa6.97□□□□□ -1.29
HTT-208ENST00000510626 ZNF492Q9P255 531 aa6.97□□□□□ -1.29
HTT-208ENST00000510626 C17orf98A8MV24 154 aa6.97□□□□□ -1.29
HTT-208ENST00000510626 RAMP3O60896 148 aa6.97□□□□□ -1.29
HTT-208ENST00000510626 TOMM40O96008 361 aa6.97□□□□□ -1.29
HTT-208ENST00000510626 NAPSAO96009 420 aa6.97□□□□□ -1.29
HTT-208ENST00000510626 NUP35Q8NFH5 326 aa6.97□□□□□ -1.29
HTT-208ENST00000510626 C18orf15Q96N68 181 aa6.97□□□□□ -1.29
HTT-208ENST00000510626 RNASE7Q9H1E1 156 aaKnown RBP6.97□□□□□ -1.29
HTT-208ENST00000510626 MYMXA0A1B0GTQ4 84 aa6.97□□□□□ -1.29
HTT-208ENST00000510626 SAA2-SAA4A0A096LPE2 208 aa6.97□□□□□ -1.29
HTT-208ENST00000510626 EVI2AP22794 236 aa6.97□□□□□ -1.29
HTT-208ENST00000510626 KLRD1Q13241 179 aa6.97□□□□□ -1.29
HTT-208ENST00000510626 PLA2G2FQ9BZM2 168 aa6.97□□□□□ -1.29
HTT-208ENST00000510626 H3BMG7 143 aa6.97□□□□□ -1.29
HTT-208ENST00000510626 SMAD7O15105 426 aaKnown RBP6.97□□□□□ -1.29
HTT-208ENST00000510626 COX6A1P12074 109 aa6.97□□□□□ -1.29
HTT-208ENST00000510626 TMEM42Q69YG0 159 aa6.97□□□□□ -1.29
HTT-208ENST00000510626 CHCHD2Q9Y6H1 151 aaPredicted RBP6.97□□□□□ -1.29
HTT-208ENST00000510626 A0A1W2PPE3 182 aa6.96□□□□□ -1.29
HTT-208ENST00000510626 FAM90A27PA6NNH2 459 aa6.96□□□□□ -1.29
HTT-208ENST00000510626 SLAQ13239 276 aa6.96□□□□□ -1.29
HTT-208ENST00000510626 RPL39P5Q59GN2 51 aa6.96□□□□□ -1.29
HTT-208ENST00000510626 SPAG8Q99932 426 aaPredicted RBP6.96□□□□□ -1.29
HTT-208ENST00000510626 ARRDC1-AS1Q9H2J1 176 aa6.96□□□□□ -1.29
HTT-208ENST00000510626 ZIC3O60481 467 aa6.96□□□□□ -1.29
HTT-208ENST00000510626 HGFACQ04756 655 aa6.96□□□□□ -1.3
HTT-208ENST00000510626 MAJINQ3KP22 176 aa6.96□□□□□ -1.3
HTT-208ENST00000510626 SMRP1Q8NCR6 262 aa6.96□□□□□ -1.3
HTT-208ENST00000510626 GREM1O60565 184 aa6.96□□□□□ -1.3
HTT-208ENST00000510626 C1QL2Q7Z5L3 287 aa6.96□□□□□ -1.3
HTT-208ENST00000510626 VGLL1Q99990 258 aa6.96□□□□□ -1.3
HTT-208ENST00000510626 PSG1P11464 419 aa6.96□□□□□ -1.3
HTT-208ENST00000510626 TDGF1P13385 188 aa6.96□□□□□ -1.3
HTT-208ENST00000510626 TMEM171Q8WVE6 324 aa6.96□□□□□ -1.3
HTT-208ENST00000510626 IMUPQ9GZP8 106 aa6.96□□□□□ -1.3
HTT-208ENST00000510626 SIGLEC8Q9NYZ4 499 aa6.96□□□□□ -1.3
HTT-208ENST00000510626 FCN3O75636 299 aa6.96□□□□□ -1.3
HTT-208ENST00000510626 CELA2BP08218 269 aaPredicted RBP6.96□□□□□ -1.3
HTT-208ENST00000510626 DUTP33316 252 aaKnown RBP6.96□□□□□ -1.3
HTT-208ENST00000510626 A0A1W2PQF6 199 aa6.96□□□□□ -1.3
HTT-208ENST00000510626 ZNF883P0CG24 379 aa6.96□□□□□ -1.3
HTT-208ENST00000510626 IL9P15248 144 aa6.96□□□□□ -1.3
HTT-208ENST00000510626 TREML4Q6UXN2 200 aa6.96□□□□□ -1.3
HTT-208ENST00000510626 CD28P10747 220 aa6.96□□□□□ -1.3
HTT-208ENST00000510626 RNASE4P34096 147 aaKnown RBP6.96□□□□□ -1.3
HTT-208ENST00000510626 ATP5EP56381 51 aaPredicted RBP6.96□□□□□ -1.3
HTT-208ENST00000510626 DUX5Q96PT3 197 aa6.96□□□□□ -1.3
HTT-208ENST00000510626 CGB1A6NKQ9 187 aa6.95□□□□□ -1.3
HTT-208ENST00000510626 M0R381 172 aa6.95□□□□□ -1.3
HTT-208ENST00000510626 NEU4Q8WWR8 484 aaPredicted RBP6.95□□□□□ -1.3
HTT-208ENST00000510626 PSG8Q9UQ74 426 aa6.95□□□□□ -1.3
HTT-208ENST00000510626 TRACP01848 142 aa6.95□□□□□ -1.3
HTT-208ENST00000510626 ZNF688P0C7X2 276 aa6.95□□□□□ -1.3
HTT-208ENST00000510626 KLHDC3Q9BQ90 382 aa6.95□□□□□ -1.3
HTT-208ENST00000510626 SAA1P0DJI8 122 aaPredicted RBP6.95□□□□□ -1.3
HTT-208ENST00000510626 HLA-DRB4P13762 266 aa6.95□□□□□ -1.3
HTT-208ENST00000510626 HLA-DRB4X5D2U9 266 aa6.95□□□□□ -1.3
HTT-208ENST00000510626 GFRA3O60609 400 aa6.95□□□□□ -1.3
HTT-208ENST00000510626 IGLC2P0DOY2 106 aa6.95□□□□□ -1.3
HTT-208ENST00000510626 IGLC3P0DOY3 106 aa6.95□□□□□ -1.3
HTT-208ENST00000510626 A6NNC1 897 aa6.95□□□□□ -1.3
HTT-208ENST00000510626 SELLP14151 372 aa6.95□□□□□ -1.3
HTT-208ENST00000510626 NBR2O15453 112 aa6.95□□□□□ -1.3
HTT-208ENST00000510626 CCL8P80075 99 aa6.95□□□□□ -1.3
HTT-208ENST00000510626 SP7Q8TDD2 431 aaPredicted RBP6.95□□□□□ -1.3
HTT-208ENST00000510626 ZNF106Q9H2Y7 1883 aaKnown RBP6.95□□□□□ -1.3
HTT-208ENST00000510626 A0A1W2PPM0 123 aa6.95□□□□□ -1.3
HTT-208ENST00000510626 NDUFB8O95169 186 aa6.95□□□□□ -1.3
HTT-208ENST00000510626 LGALS9BQ3B8N2 356 aa6.95□□□□□ -1.3
HTT-208ENST00000510626 LGALS9CQ6DKI2 356 aa6.95□□□□□ -1.3
HTT-208ENST00000510626 ASCL4Q6XD76 172 aa6.95□□□□□ -1.3
HTT-208ENST00000510626 ITGBL1O95965 494 aaPredicted RBP6.95□□□□□ -1.3
HTT-208ENST00000510626 TMEM167AQ8TBQ9 72 aa6.95□□□□□ -1.3
HTT-208ENST00000510626 SUPT4H1P63272 117 aaKnown RBP6.95□□□□□ -1.3
HTT-208ENST00000510626 PMS2CLQ68D20 193 aa6.95□□□□□ -1.3
HTT-208ENST00000510626 APELAP0DMC3 54 aa6.94□□□□□ -1.3
HTT-208ENST00000510626 FBXL7Q9UJT9 491 aa6.94□□□□□ -1.3
HTT-208ENST00000510626 SNHG12Q9BXW3 62 aa6.94□□□□□ -1.3
HTT-208ENST00000510626 LYPD3O95274 346 aa6.94□□□□□ -1.3
HTT-208ENST00000510626 MALP21145 153 aa6.94□□□□□ -1.3
HTT-208ENST00000510626 POLR3KQ9Y2Y1 108 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms