RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 BRS3P32247 399 aa12.77□□□□□ -0.36
SQSTM1-213ENST00000510187 MYCNOSP40205 109 aa12.77□□□□□ -0.36
SQSTM1-213ENST00000510187 FXYD3Q14802 87 aa12.77□□□□□ -0.36
SQSTM1-213ENST00000510187 MRPL52Q86TS9 123 aaKnown RBP12.77□□□□□ -0.36
SQSTM1-213ENST00000510187 CRYGBP07316 175 aa12.76□□□□□ -0.37
SQSTM1-213ENST00000510187 PYYP10082 97 aa12.76□□□□□ -0.37
SQSTM1-213ENST00000510187 RPL27AP46776 148 aaKnown RBP12.76□□□□□ -0.37
SQSTM1-213ENST00000510187 DLX1P56177 255 aa12.76□□□□□ -0.37
SQSTM1-213ENST00000510187 GRAMD2BQ96HH9 432 aa12.76□□□□□ -0.37
SQSTM1-213ENST00000510187 TBX15Q96SF7 602 aa12.76□□□□□ -0.37
SQSTM1-213ENST00000510187 HSPB9Q9BQS6 159 aa12.76□□□□□ -0.37
SQSTM1-213ENST00000510187 SAMD10Q9BYL1 202 aa12.76□□□□□ -0.37
SQSTM1-213ENST00000510187 GNB4Q9HAV0 340 aa12.76□□□□□ -0.37
SQSTM1-213ENST00000510187 TNFRSF19Q9NS68 423 aa12.76□□□□□ -0.37
SQSTM1-213ENST00000510187 A0A1B0GV90 55 aa12.76□□□□□ -0.37
SQSTM1-213ENST00000510187 ZNF705FA8MVS1 300 aaPredicted RBP12.76□□□□□ -0.37
SQSTM1-213ENST00000510187 ZNF705DP0CH99 300 aaPredicted RBP12.76□□□□□ -0.37
SQSTM1-213ENST00000510187 ZNF705BP0CI00 300 aaPredicted RBP12.76□□□□□ -0.37
SQSTM1-213ENST00000510187 PRRX1P54821 245 aa12.76□□□□□ -0.37
SQSTM1-213ENST00000510187 LOXL1Q08397 574 aaPredicted RBP12.76□□□□□ -0.37
SQSTM1-213ENST00000510187 TMEM183BQ1AE95 376 aa12.76□□□□□ -0.37
SQSTM1-213ENST00000510187 TPTE2P1Q5T6R2 138 aa12.76□□□□□ -0.37
SQSTM1-213ENST00000510187 LINC00305Q7Z4B0 112 aa12.76□□□□□ -0.37
SQSTM1-213ENST00000510187 KIR3DL3Q8N743 410 aa12.76□□□□□ -0.37
SQSTM1-213ENST00000510187 TMEM116Q8NCL8 245 aa12.76□□□□□ -0.37
SQSTM1-213ENST00000510187 TMEM190Q8WZ59 177 aa12.76□□□□□ -0.37
SQSTM1-213ENST00000510187 FOXC2Q99958 501 aa12.76□□□□□ -0.37
SQSTM1-213ENST00000510187 C20orf144Q9BQM9 153 aa12.76□□□□□ -0.37
SQSTM1-213ENST00000510187 TPSG1Q9NRR2 321 aa12.76□□□□□ -0.37
SQSTM1-213ENST00000510187 ITPR2Q14571 2701 aa12.75□□□□□ -0.37
SQSTM1-213ENST00000510187 FRMD6-AS1P0C7T7 363 aa12.75□□□□□ -0.37
SQSTM1-213ENST00000510187 COMPP49747 757 aaPredicted RBP12.75□□□□□ -0.37
SQSTM1-213ENST00000510187 PLP1P60201 277 aa12.75□□□□□ -0.37
SQSTM1-213ENST00000510187 PRB3Q04118 309 aaPredicted RBP12.75□□□□□ -0.37
SQSTM1-213ENST00000510187 C1orf122Q6ZSJ8 110 aa12.75□□□□□ -0.37
SQSTM1-213ENST00000510187 SIGLECL1Q8N7X8 197 aa12.75□□□□□ -0.37
SQSTM1-213ENST00000510187 MAPK1IP1LQ8NDC0 245 aa12.75□□□□□ -0.37
SQSTM1-213ENST00000510187 KCNS1Q96KK3 526 aa12.75□□□□□ -0.37
SQSTM1-213ENST00000510187 SERTAD4Q9NUC0 356 aa12.75□□□□□ -0.37
SQSTM1-213ENST00000510187 MRPL36Q9P0J6 103 aaKnown RBP12.75□□□□□ -0.37
SQSTM1-213ENST00000510187 IGHV2-26A0A0B4J1V2 119 aa12.74□□□□□ -0.37
SQSTM1-213ENST00000510187 B4DSR2 109 aa12.74□□□□□ -0.37
SQSTM1-213ENST00000510187 IGLV1-47P01700 117 aa12.74□□□□□ -0.37
SQSTM1-213ENST00000510187 MSMBP08118 114 aa12.74□□□□□ -0.37
SQSTM1-213ENST00000510187 TCL1AP56279 114 aa12.74□□□□□ -0.37
SQSTM1-213ENST00000510187 USF2Q15853 346 aaPredicted RBP12.74□□□□□ -0.37
SQSTM1-213ENST00000510187 TOMM20LQ6UXN7 152 aa12.74□□□□□ -0.37
SQSTM1-213ENST00000510187 WFDC11Q8NEX6 87 aa12.74□□□□□ -0.37
SQSTM1-213ENST00000510187 MISP3Q96FF7 219 aa12.74□□□□□ -0.37
SQSTM1-213ENST00000510187 ZNF331Q9NQX6 463 aaPredicted RBP12.74□□□□□ -0.37
SQSTM1-213ENST00000510187 ZNF586Q9NXT0 402 aa12.74□□□□□ -0.37
SQSTM1-213ENST00000510187 KLF12Q9Y4X4 402 aa12.74□□□□□ -0.37
SQSTM1-213ENST00000510187 MAP1AP78559 2803 aaPredicted RBP12.74□□□□□ -0.37
SQSTM1-213ENST00000510187 BMPR1BO00238 502 aa12.74□□□□□ -0.37
SQSTM1-213ENST00000510187 REG1AP05451 166 aa12.74□□□□□ -0.37
SQSTM1-213ENST00000510187 GPX1P07203 203 aa12.74□□□□□ -0.37
SQSTM1-213ENST00000510187 SNRPCP09234 159 aaKnown RBP12.74□□□□□ -0.37
SQSTM1-213ENST00000510187 HIST1H1EP10412 219 aaKnown RBP12.74□□□□□ -0.37
SQSTM1-213ENST00000510187 PRTN3P24158 256 aa12.74□□□□□ -0.37
SQSTM1-213ENST00000510187 COX7A1P24310 79 aa12.74□□□□□ -0.37
SQSTM1-213ENST00000510187 RNF5Q99942 180 aa12.74□□□□□ -0.37
SQSTM1-213ENST00000510187 CLEC7AQ9BXN2 247 aa12.74□□□□□ -0.37
SQSTM1-213ENST00000510187 EPDR1Q9UM22 224 aa12.74□□□□□ -0.37
SQSTM1-213ENST00000510187 SIGLEC9Q9Y336 463 aa12.74□□□□□ -0.37
SQSTM1-213ENST00000510187 INSIG2Q9Y5U4 225 aa12.74□□□□□ -0.37
SQSTM1-213ENST00000510187 PDZD2O15018 2839 aa12.73□□□□□ -0.37
SQSTM1-213ENST00000510187 TOX4O94842 621 aa12.73□□□□□ -0.37
SQSTM1-213ENST00000510187 APCSP02743 223 aa12.73□□□□□ -0.37
SQSTM1-213ENST00000510187 MRPL54Q6P161 138 aaKnown RBP12.73□□□□□ -0.37
SQSTM1-213ENST00000510187 VMO1Q7Z5L0 202 aa12.73□□□□□ -0.37
SQSTM1-213ENST00000510187 RITA1Q96K30 269 aa12.73□□□□□ -0.37
SQSTM1-213ENST00000510187 SRSF8Q9BRL6 282 aaKnown RBP12.73□□□□□ -0.37
SQSTM1-213ENST00000510187 SIRPDQ9H106 197 aa12.73□□□□□ -0.37
SQSTM1-213ENST00000510187 C7orf69Q9H7B7 122 aa12.73□□□□□ -0.37
SQSTM1-213ENST00000510187 PRRC2AP48634 2157 aaKnown RBP12.73□□□□□ -0.37
SQSTM1-213ENST00000510187 CCDC168Q8NDH2 2452 aa12.72□□□□□ -0.37
SQSTM1-213ENST00000510187 F2Z2F3 143 aa12.72□□□□□ -0.37
SQSTM1-213ENST00000510187 HYPMO75409 117 aa12.72□□□□□ -0.37
SQSTM1-213ENST00000510187 UBE2G1P62253 170 aa12.72□□□□□ -0.37
SQSTM1-213ENST00000510187 TNXAQ16473 311 aa12.72□□□□□ -0.37
SQSTM1-213ENST00000510187 ATP5L2Q7Z4Y8 100 aa12.72□□□□□ -0.37
SQSTM1-213ENST00000510187 LINC01356Q8N9X3 169 aa12.72□□□□□ -0.37
SQSTM1-213ENST00000510187 LINC00479Q96M42 142 aa12.72□□□□□ -0.37
SQSTM1-213ENST00000510187 MRPL27Q9P0M9 148 aaKnown RBP12.72□□□□□ -0.37
SQSTM1-213ENST00000510187 F11RQ9Y624 299 aaKnown RBP12.72□□□□□ -0.37
SQSTM1-213ENST00000510187 ABCA2Q9BZC7 2435 aa12.72□□□□□ -0.37
SQSTM1-213ENST00000510187 IGHV1-3A0A0C4DH29 117 aa12.71□□□□□ -0.37
SQSTM1-213ENST00000510187 SPINK4O60575 86 aa12.71□□□□□ -0.37
SQSTM1-213ENST00000510187 MFAP2P55001 183 aa12.71□□□□□ -0.37
SQSTM1-213ENST00000510187 NUDT10Q8NFP7 164 aa12.71□□□□□ -0.37
SQSTM1-213ENST00000510187 OR1B1Q8NGR6 318 aa12.71□□□□□ -0.37
SQSTM1-213ENST00000510187 TSKUQ8WUA8 353 aa12.71□□□□□ -0.37
SQSTM1-213ENST00000510187 NUDT11Q96G61 164 aa12.71□□□□□ -0.37
SQSTM1-213ENST00000510187 RBM14Q96PK6 669 aaKnown RBP12.71□□□□□ -0.37
SQSTM1-213ENST00000510187 BUB1B-PAK6H3BSN5 160 aa12.71□□□□□ -0.38
SQSTM1-213ENST00000510187 M0R143 59 aa12.71□□□□□ -0.38
SQSTM1-213ENST00000510187 ZNF253O75346 499 aa12.71□□□□□ -0.38
SQSTM1-213ENST00000510187 MOSP00540 346 aa12.71□□□□□ -0.38
SQSTM1-213ENST00000510187 SLC25A5P05141 298 aaKnown RBP12.71□□□□□ -0.38
SQSTM1-213ENST00000510187 GP9P14770 177 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms