RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 CCL15-CCL14A0A0B4J2E2 113 aa3.48□□□□□ -1.85
NIPBL-206ENST00000509429 IGHV1-58A0A0C4DH39 117 aa3.48□□□□□ -1.85
NIPBL-206ENST00000509429 LOC100131303A0A0U1RQF7 123 aa3.48□□□□□ -1.85
NIPBL-206ENST00000509429 MUC21A0A140T8X8 626 aa3.48□□□□□ -1.85
NIPBL-206ENST00000509429 TLCD2A6NGC4 264 aa3.48□□□□□ -1.85
NIPBL-206ENST00000509429 A8MWV9 139 aa3.48□□□□□ -1.85
NIPBL-206ENST00000509429 C9JQL5 133 aa3.48□□□□□ -1.85
NIPBL-206ENST00000509429 H3BMG7 143 aa3.48□□□□□ -1.85
NIPBL-206ENST00000509429 SS18L1O75177 396 aaPredicted RBP3.48□□□□□ -1.85
NIPBL-206ENST00000509429 CSRP3P50461 194 aa3.48□□□□□ -1.85
NIPBL-206ENST00000509429 RPS18P62269 152 aaKnown RBP3.48□□□□□ -1.85
NIPBL-206ENST00000509429 CACNG7P62955 275 aa3.48□□□□□ -1.85
NIPBL-206ENST00000509429 ERCC8Q13216 396 aa3.48□□□□□ -1.85
NIPBL-206ENST00000509429 SRSF9Q13242 221 aaKnown RBP eCLIP3.48□□□□□ -1.85
NIPBL-206ENST00000509429 MUC21Q5SSG8 566 aa3.48□□□□□ -1.85
NIPBL-206ENST00000509429 FAM222AQ5U5X8 452 aa3.48□□□□□ -1.85
NIPBL-206ENST00000509429 LAIR2Q6ISS4 152 aa3.48□□□□□ -1.85
NIPBL-206ENST00000509429 CLEC19AQ6UXS0 136 aa3.48□□□□□ -1.85
NIPBL-206ENST00000509429 DPPA3Q6W0C5 159 aa3.48□□□□□ -1.85
NIPBL-206ENST00000509429 DNM1P46Q6ZS02 220 aa3.48□□□□□ -1.85
NIPBL-206ENST00000509429 RFLNAQ6ZTI6 216 aa3.48□□□□□ -1.85
NIPBL-206ENST00000509429 LINC00305Q7Z4B0 112 aa3.48□□□□□ -1.85
NIPBL-206ENST00000509429 ATP5L2Q7Z4Y8 100 aa3.48□□□□□ -1.85
NIPBL-206ENST00000509429 VN1R4Q7Z5H5 301 aa3.48□□□□□ -1.85
NIPBL-206ENST00000509429 PCP2Q8IVA1 136 aa3.48□□□□□ -1.85
NIPBL-206ENST00000509429 METTL27Q8N6F8 245 aaPredicted RBP3.48□□□□□ -1.85
NIPBL-206ENST00000509429 Q8N976 141 aa3.48□□□□□ -1.85
NIPBL-206ENST00000509429 ZNF555Q8NEP9 628 aa3.48□□□□□ -1.85
NIPBL-206ENST00000509429 BRK1Q8WUW1 75 aa3.48□□□□□ -1.85
NIPBL-206ENST00000509429 AMELYQ99218 206 aa3.48□□□□□ -1.85
NIPBL-206ENST00000509429 SLC35B3Q9H1N7 401 aa3.48□□□□□ -1.85
NIPBL-206ENST00000509429 ANAPC10Q9UM13 185 aa3.48□□□□□ -1.85
NIPBL-206ENST00000509429 OR2W1Q9Y3N9 320 aa3.48□□□□□ -1.85
NIPBL-206ENST00000509429 COL4A5P29400 1685 aa3.48□□□□□ -1.85
NIPBL-206ENST00000509429 SCN1AP35498 2009 aa3.48□□□□□ -1.85
NIPBL-206ENST00000509429 BRCA1P38398 1863 aaKnown RBP3.47□□□□□ -1.85
NIPBL-206ENST00000509429 FRMPD3Q5JV73 1810 aa3.47□□□□□ -1.85
NIPBL-206ENST00000509429 TRAV9-2A0A087WT02 112 aa3.47□□□□□ -1.85
NIPBL-206ENST00000509429 IGLV1-36A0A0B4J1U3 117 aa3.47□□□□□ -1.85
NIPBL-206ENST00000509429 UMAD1C9J7I0 102 aa3.47□□□□□ -1.85
NIPBL-206ENST00000509429 LGALS9O00182 355 aa3.47□□□□□ -1.85
NIPBL-206ENST00000509429 NDUFS5O43920 106 aa3.47□□□□□ -1.85
NIPBL-206ENST00000509429 NDUFS7O75251 213 aa3.47□□□□□ -1.85
NIPBL-206ENST00000509429 ZNF737O75373 536 aa3.47□□□□□ -1.85
NIPBL-206ENST00000509429 RBMY1CP0DJD4 496 aa3.47□□□□□ -1.85
NIPBL-206ENST00000509429 IGHV4-31P0DP07 118 aa3.47□□□□□ -1.85
NIPBL-206ENST00000509429 TPT1P13693 172 aaKnown RBP3.47□□□□□ -1.85
NIPBL-206ENST00000509429 SEC61BP60468 96 aaKnown RBP3.47□□□□□ -1.85
NIPBL-206ENST00000509429 PRR3P79522 188 aaKnown RBP3.47□□□□□ -1.85
NIPBL-206ENST00000509429 WFDC2Q14508 124 aa3.47□□□□□ -1.85
NIPBL-206ENST00000509429 IGFBP7Q16270 282 aa3.47□□□□□ -1.85
NIPBL-206ENST00000509429 NMSQ5H8A3 153 aa3.47□□□□□ -1.85
NIPBL-206ENST00000509429 LINC01545Q5VT33 79 aa3.47□□□□□ -1.85
NIPBL-206ENST00000509429 ZNF322Q6U7Q0 402 aaPredicted RBP3.47□□□□□ -1.85
NIPBL-206ENST00000509429 COPS9Q8WXC6 57 aa3.47□□□□□ -1.85
NIPBL-206ENST00000509429 NABP1Q96AH0 204 aa3.47□□□□□ -1.85
NIPBL-206ENST00000509429 RBMXL1Q96E39 390 aaKnown RBP3.47□□□□□ -1.85
NIPBL-206ENST00000509429 KCNS1Q96KK3 526 aa3.47□□□□□ -1.85
NIPBL-206ENST00000509429 OR2A5Q96R48 311 aa3.47□□□□□ -1.85
NIPBL-206ENST00000509429 TMEM204Q9BSN7 226 aa3.47□□□□□ -1.85
NIPBL-206ENST00000509429 SCRT1Q9BWW7 348 aa3.47□□□□□ -1.85
NIPBL-206ENST00000509429 FAM60AQ9NP50 221 aa3.47□□□□□ -1.85
NIPBL-206ENST00000509429 OCIAD1Q9NX40 245 aa3.47□□□□□ -1.85
NIPBL-206ENST00000509429 TAAR3PQ9P1P4 343 aa3.47□□□□□ -1.85
NIPBL-206ENST00000509429 DNAJC15Q9Y5T4 150 aa3.47□□□□□ -1.85
NIPBL-206ENST00000509429 RALGAPA1Q6GYQ0 2036 aa3.47□□□□□ -1.85
NIPBL-206ENST00000509429 MICAL3Q7RTP6 2002 aa3.47□□□□□ -1.85
NIPBL-206ENST00000509429 CCDC88CQ9P219 2028 aa3.47□□□□□ -1.85
NIPBL-206ENST00000509429 MYO10Q9HD67 2058 aa3.47□□□□□ -1.85
NIPBL-206ENST00000509429 MYLKQ15746 1914 aa3.46□□□□□ -1.85
NIPBL-206ENST00000509429 DENND4CQ5VZ89 1909 aa3.46□□□□□ -1.85
NIPBL-206ENST00000509429 SCN10AQ9Y5Y9 1956 aa3.46□□□□□ -1.86
NIPBL-206ENST00000509429 FXYD6-FXYD2A0A087WZ82 144 aa3.46□□□□□ -1.86
NIPBL-206ENST00000509429 TRAV8-1A0A0A6YYK1 113 aa3.46□□□□□ -1.86
NIPBL-206ENST00000509429 IGHV3OR16-9A0A0B4J2B5 98 aa3.46□□□□□ -1.86
NIPBL-206ENST00000509429 GRIFINA4D1Z8 144 aa3.46□□□□□ -1.86
NIPBL-206ENST00000509429 C11orf98E9PRG8 122 aa3.46□□□□□ -1.86
NIPBL-206ENST00000509429 H3BT86 120 aa3.46□□□□□ -1.86
NIPBL-206ENST00000509429 SYS1-DBNDD2H3BUS1 97 aa3.46□□□□□ -1.86
NIPBL-206ENST00000509429 H3BUT2 72 aa3.46□□□□□ -1.86
NIPBL-206ENST00000509429 M0R129 80 aa3.46□□□□□ -1.86
NIPBL-206ENST00000509429 FFAR1O14842 300 aa3.46□□□□□ -1.86
NIPBL-206ENST00000509429 RBP4P02753 201 aa3.46□□□□□ -1.86
NIPBL-206ENST00000509429 ZNF688P0C7X2 276 aa3.46□□□□□ -1.86
NIPBL-206ENST00000509429 ZNF286BP0CG31 522 aa3.46□□□□□ -1.86
NIPBL-206ENST00000509429 COX7CP15954 63 aa3.46□□□□□ -1.86
NIPBL-206ENST00000509429 CRISP2P16562 243 aa3.46□□□□□ -1.86
NIPBL-206ENST00000509429 CBLN1P23435 193 aa3.46□□□□□ -1.86
NIPBL-206ENST00000509429 LGALS9BQ3B8N2 356 aa3.46□□□□□ -1.86
NIPBL-206ENST00000509429 NSUN5P1Q3KNT7 163 aa3.46□□□□□ -1.86
NIPBL-206ENST00000509429 ABCA11PQ4W5N1 156 aa3.46□□□□□ -1.86
NIPBL-206ENST00000509429 KTN1-AS1Q86SY8 53 aa3.46□□□□□ -1.86
NIPBL-206ENST00000509429 TEN1Q86WV5 123 aa3.46□□□□□ -1.86
NIPBL-206ENST00000509429 PPDPFLQ8WWR9 84 aa3.46□□□□□ -1.86
NIPBL-206ENST00000509429 TMEM158Q8WZ71 300 aa3.46□□□□□ -1.86
NIPBL-206ENST00000509429 TVP23CQ96ET8 276 aa3.46□□□□□ -1.86
NIPBL-206ENST00000509429 ATXN7L3BQ96GX2 97 aa3.46□□□□□ -1.86
NIPBL-206ENST00000509429 SHANK2-AS3Q9BTD1 123 aa3.46□□□□□ -1.86
NIPBL-206ENST00000509429 EIF5A2Q9GZV4 153 aaKnown RBP3.46□□□□□ -1.86
NIPBL-206ENST00000509429 FXYD6Q9H0Q3 95 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms