RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 HLA-DRB4P13762 266 aa8.08□□□□□ -1.12
PDGFRA-207ENST00000509092 MPV17P39210 176 aa8.08□□□□□ -1.12
PDGFRA-207ENST00000509092 MYCNOSP40205 109 aa8.08□□□□□ -1.12
PDGFRA-207ENST00000509092 TNFRSF4P43489 277 aa8.08□□□□□ -1.12
PDGFRA-207ENST00000509092 SMCPP49901 116 aaPredicted RBP8.08□□□□□ -1.12
PDGFRA-207ENST00000509092 VKORC1L1Q8N0U8 176 aa8.08□□□□□ -1.12
PDGFRA-207ENST00000509092 MAFAQ8NHW3 353 aaPredicted RBP8.08□□□□□ -1.12
PDGFRA-207ENST00000509092 HLA-DRB4X5D2U9 266 aa8.08□□□□□ -1.12
PDGFRA-207ENST00000509092 SPTY2D1-AS1A0A0U1RR47 76 aa8.07□□□□□ -1.12
PDGFRA-207ENST00000509092 CCDC179H3BU77 68 aa8.07□□□□□ -1.12
PDGFRA-207ENST00000509092 RHODO00212 210 aa8.07□□□□□ -1.12
PDGFRA-207ENST00000509092 MOSP00540 346 aa8.07□□□□□ -1.12
PDGFRA-207ENST00000509092 PYYP10082 97 aa8.07□□□□□ -1.12
PDGFRA-207ENST00000509092 RIGQ13278 110 aa8.07□□□□□ -1.12
PDGFRA-207ENST00000509092 RND1Q92730 232 aa8.07□□□□□ -1.12
PDGFRA-207ENST00000509092 OCIAD1Q9NX40 245 aa8.07□□□□□ -1.12
PDGFRA-207ENST00000509092 DKK2Q9UBU2 259 aa8.07□□□□□ -1.12
PDGFRA-207ENST00000509092 ASCC3Q8N3C0 2202 aaKnown RBP8.07□□□□□ -1.12
PDGFRA-207ENST00000509092 CENPVL3A0A0U1RRI6 287 aa8.07□□□□□ -1.12
PDGFRA-207ENST00000509092 DNPH1O43598 174 aa8.07□□□□□ -1.12
PDGFRA-207ENST00000509092 ZFAND5O76080 213 aa8.07□□□□□ -1.12
PDGFRA-207ENST00000509092 DKK1O94907 266 aa8.07□□□□□ -1.12
PDGFRA-207ENST00000509092 IGHG4P01861 327 aa8.07□□□□□ -1.12
PDGFRA-207ENST00000509092 MEOX1P50221 254 aa8.07□□□□□ -1.12
PDGFRA-207ENST00000509092 NDUFV3P56181 108 aaKnown RBP8.07□□□□□ -1.12
PDGFRA-207ENST00000509092 DIAPH2-AS1Q14236 149 aa8.07□□□□□ -1.12
PDGFRA-207ENST00000509092 SLC25A48Q6ZT89 311 aaKnown RBP8.07□□□□□ -1.12
PDGFRA-207ENST00000509092 RITA1Q96K30 269 aa8.07□□□□□ -1.12
PDGFRA-207ENST00000509092 FOXA2Q9Y261 457 aaPredicted RBP8.07□□□□□ -1.12
PDGFRA-207ENST00000509092 A0A1B0GUT8 65 aa8.06□□□□□ -1.12
PDGFRA-207ENST00000509092 A0A1W2PQM1 296 aa8.06□□□□□ -1.12
PDGFRA-207ENST00000509092 K7EMI3 77 aa8.06□□□□□ -1.12
PDGFRA-207ENST00000509092 FMC1Q96HJ9 113 aa8.06□□□□□ -1.12
PDGFRA-207ENST00000509092 ZNF714Q96N38 554 aa8.06□□□□□ -1.12
PDGFRA-207ENST00000509092 SPXQ9BT56 116 aa8.06□□□□□ -1.12
PDGFRA-207ENST00000509092 VPREB3Q9UKI3 123 aa8.06□□□□□ -1.12
PDGFRA-207ENST00000509092 HEATR1Q9H583 2144 aaKnown RBP8.06□□□□□ -1.12
PDGFRA-207ENST00000509092 TMEM8BA6NDV4 472 aa8.05□□□□□ -1.12
PDGFRA-207ENST00000509092 TMEM262E9PQX1 116 aa8.05□□□□□ -1.12
PDGFRA-207ENST00000509092 OVOL3O00110 214 aa8.05□□□□□ -1.12
PDGFRA-207ENST00000509092 ZNHIT1O43257 154 aa8.05□□□□□ -1.12
PDGFRA-207ENST00000509092 HSPE1P61604 102 aaKnown RBP8.05□□□□□ -1.12
PDGFRA-207ENST00000509092 DLX4Q92988 240 aaPredicted RBP8.05□□□□□ -1.12
PDGFRA-207ENST00000509092 FXYD5Q96DB9 178 aa8.05□□□□□ -1.12
PDGFRA-207ENST00000509092 CARD19Q96LW7 228 aa8.05□□□□□ -1.12
PDGFRA-207ENST00000509092 SRSF8Q9BRL6 282 aaKnown RBP8.05□□□□□ -1.12
PDGFRA-207ENST00000509092 TTTY13Q9BZ97 58 aa8.05□□□□□ -1.12
PDGFRA-207ENST00000509092 RAB1BQ9H0U4 201 aa8.05□□□□□ -1.12
PDGFRA-207ENST00000509092 ZMAT4Q9H898 229 aa8.05□□□□□ -1.12
PDGFRA-207ENST00000509092 CHCHD2Q9Y6H1 151 aaPredicted RBP8.05□□□□□ -1.12
PDGFRA-207ENST00000509092 MUC3AQ02505 3323 aa8.05□□□□□ -1.12
PDGFRA-207ENST00000509092 CNTRLQ7Z7A1 2325 aa8.05□□□□□ -1.12
PDGFRA-207ENST00000509092 DLL1O00548 723 aa8.05□□□□□ -1.12
PDGFRA-207ENST00000509092 NDUFS7O75251 213 aa8.05□□□□□ -1.12
PDGFRA-207ENST00000509092 MOB3BQ86TA1 216 aa8.05□□□□□ -1.12
PDGFRA-207ENST00000509092 YRDCQ86U90 279 aaKnown RBP8.05□□□□□ -1.12
PDGFRA-207ENST00000509092 SGK494Q96LW2 274 aa8.05□□□□□ -1.12
PDGFRA-207ENST00000509092 TMEM14BQ9NUH8 114 aa8.05□□□□□ -1.12
PDGFRA-207ENST00000509092 AGRNO00468 2067 aa8.05□□□□□ -1.12
PDGFRA-207ENST00000509092 IGHV3-43A0A0B4J1X8 118 aa8.04□□□□□ -1.12
PDGFRA-207ENST00000509092 WI2-2373I1.2A0A1W2PRP0 233 aa8.04□□□□□ -1.12
PDGFRA-207ENST00000509092 ZNF688P0C7X2 276 aa8.04□□□□□ -1.12
PDGFRA-207ENST00000509092 IGHV3-43DP0DP04 118 aa8.04□□□□□ -1.12
PDGFRA-207ENST00000509092 PRTN3P24158 256 aa8.04□□□□□ -1.12
PDGFRA-207ENST00000509092 PLP2Q04941 152 aa8.04□□□□□ -1.12
PDGFRA-207ENST00000509092 PAX8Q06710 450 aa8.04□□□□□ -1.12
PDGFRA-207ENST00000509092 TEN1Q86WV5 123 aa8.04□□□□□ -1.12
PDGFRA-207ENST00000509092 FAM169BQ8N8A8 192 aa8.04□□□□□ -1.12
PDGFRA-207ENST00000509092 HHLA3Q9XRX5 114 aa8.04□□□□□ -1.12
PDGFRA-207ENST00000509092 LOC389332A0A1B0GUA5 103 aa8.04□□□□□ -1.12
PDGFRA-207ENST00000509092 COX7A2P2O60397 106 aa8.04□□□□□ -1.12
PDGFRA-207ENST00000509092 PSPNO60542 156 aa8.04□□□□□ -1.12
PDGFRA-207ENST00000509092 PROP1O75360 226 aa8.04□□□□□ -1.12
PDGFRA-207ENST00000509092 LIFP15018 202 aa8.04□□□□□ -1.12
PDGFRA-207ENST00000509092 EVI2AP22794 236 aa8.04□□□□□ -1.12
PDGFRA-207ENST00000509092 CD27P26842 260 aa8.04□□□□□ -1.12
PDGFRA-207ENST00000509092 COL8A1P27658 744 aa8.04□□□□□ -1.12
PDGFRA-207ENST00000509092 KIR2DS2P43631 304 aa8.04□□□□□ -1.12
PDGFRA-207ENST00000509092 KLF17Q5JT82 389 aaPredicted RBP8.04□□□□□ -1.12
PDGFRA-207ENST00000509092 PEAR1Q5VY43 1037 aaPredicted RBP8.04□□□□□ -1.12
PDGFRA-207ENST00000509092 PDPNQ86YL7 162 aa8.04□□□□□ -1.12
PDGFRA-207ENST00000509092 OR1L4Q8NGR5 311 aa8.04□□□□□ -1.12
PDGFRA-207ENST00000509092 PPP1R35Q8TAP8 253 aa8.04□□□□□ -1.12
PDGFRA-207ENST00000509092 RTL8AQ9BWD3 113 aa8.04□□□□□ -1.12
PDGFRA-207ENST00000509092 FAM234AQ9H0X4 552 aa8.04□□□□□ -1.12
PDGFRA-207ENST00000509092 U3KQK5 164 aa8.04□□□□□ -1.12
PDGFRA-207ENST00000509092 DYSFO75923 2080 aa8.04□□□□□ -1.12
PDGFRA-207ENST00000509092 DEFB108AA8MXU0 73 aa8.03□□□□□ -1.12
PDGFRA-207ENST00000509092 ARMS2P0C7Q2 107 aa8.03□□□□□ -1.12
PDGFRA-207ENST00000509092 PIP4P1Q86T03 277 aa8.03□□□□□ -1.12
PDGFRA-207ENST00000509092 TMEM158Q8WZ71 300 aa8.03□□□□□ -1.12
PDGFRA-207ENST00000509092 S1PR3Q99500 378 aa8.03□□□□□ -1.12
PDGFRA-207ENST00000509092 MAP1LC3AQ9H492 121 aa8.03□□□□□ -1.12
PDGFRA-207ENST00000509092 CACNA1DQ01668 2161 aa8.03□□□□□ -1.12
PDGFRA-207ENST00000509092 PGPA6NDG6 321 aa8.03□□□□□ -1.12
PDGFRA-207ENST00000509092 GAGE2BQ13066 116 aa8.03□□□□□ -1.12
PDGFRA-207ENST00000509092 GAGE2EQ4V326 116 aa8.03□□□□□ -1.12
PDGFRA-207ENST00000509092 C10orf113Q5VZT2 155 aa8.03□□□□□ -1.12
PDGFRA-207ENST00000509092 WDR86Q86TI4 376 aa8.03□□□□□ -1.12
PDGFRA-207ENST00000509092 PRRG4Q9BZD6 226 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms