RNA–Protein interactions for RNA: ENST00000507001.1

SPCS3-202, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 478 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-202ENST00000507001 LAMC1P11047 1609 aa1.71□□□□□ -2.14
SPCS3-202ENST00000507001 TRAV3A0A0B4J244 114 aa1.71□□□□□ -2.14
SPCS3-202ENST00000507001 SMIM31A0A1B0GVY4 71 aa1.71□□□□□ -2.14
SPCS3-202ENST00000507001 S100A8P05109 93 aa1.71□□□□□ -2.14
SPCS3-202ENST00000507001 COX4I1P13073 169 aa1.71□□□□□ -2.14
SPCS3-202ENST00000507001 S100PP25815 95 aa1.71□□□□□ -2.14
SPCS3-202ENST00000507001 TFAMQ00059 246 aaKnown RBP1.71□□□□□ -2.14
SPCS3-202ENST00000507001 RNASE10Q5GAN6 216 aaKnown RBP1.71□□□□□ -2.14
SPCS3-202ENST00000507001 RPS19BP1Q86WX3 136 aaKnown RBP1.71□□□□□ -2.14
SPCS3-202ENST00000507001 Q8N2B8 174 aa1.71□□□□□ -2.14
SPCS3-202ENST00000507001 FAM172AQ8WUF8 416 aa1.71□□□□□ -2.14
SPCS3-202ENST00000507001 GPR146Q96CH1 333 aa1.71□□□□□ -2.14
SPCS3-202ENST00000507001 TCEAL7Q9BRU2 100 aa1.71□□□□□ -2.14
SPCS3-202ENST00000507001 C2orf88Q9BSF0 95 aa1.71□□□□□ -2.14
SPCS3-202ENST00000507001 ADAT1Q9BUB4 502 aaKnown RBP1.71□□□□□ -2.14
SPCS3-202ENST00000507001 TMEM133Q9H2Q1 129 aa1.71□□□□□ -2.14
SPCS3-202ENST00000507001 MED23Q9ULK4 1368 aa1.71□□□□□ -2.14
SPCS3-202ENST00000507001 SPEF2Q9C093 1822 aa1.7□□□□□ -2.14
SPCS3-202ENST00000507001 FANCAO15360 1455 aa1.7□□□□□ -2.14
SPCS3-202ENST00000507001 MED14O60244 1454 aa1.7□□□□□ -2.14
SPCS3-202ENST00000507001 GOLGA3Q08378 1498 aa1.7□□□□□ -2.14
SPCS3-202ENST00000507001 TRPM1Q7Z4N2 1603 aa1.7□□□□□ -2.14
SPCS3-202ENST00000507001 TRAV14DV4A0A0A6YYC5 116 aa1.7□□□□□ -2.14
SPCS3-202ENST00000507001 ATP6V1G2-DDX39BF2Z307 99 aa1.7□□□□□ -2.14
SPCS3-202ENST00000507001 BANF1O75531 89 aa1.7□□□□□ -2.14
SPCS3-202ENST00000507001 IFNA4P05014 189 aa1.7□□□□□ -2.14
SPCS3-202ENST00000507001 NBEAP1P0C6P0 100 aa1.7□□□□□ -2.14
SPCS3-202ENST00000507001 MGST1P10620 155 aaKnown RBP1.7□□□□□ -2.14
SPCS3-202ENST00000507001 SCGB1A1P11684 91 aa1.7□□□□□ -2.14
SPCS3-202ENST00000507001 POU6F1Q14863 301 aa1.7□□□□□ -2.14
SPCS3-202ENST00000507001 RIC1Q4ADV7 1423 aa1.7□□□□□ -2.14
SPCS3-202ENST00000507001 LYRM7Q5U5X0 104 aa1.7□□□□□ -2.14
SPCS3-202ENST00000507001 OR4K15Q8NH41 348 aa1.7□□□□□ -2.14
SPCS3-202ENST00000507001 OR10J5Q8NHC4 309 aa1.7□□□□□ -2.14
SPCS3-202ENST00000507001 C1orf54Q8WWF1 131 aa1.7□□□□□ -2.14
SPCS3-202ENST00000507001 SERPINI1Q99574 410 aa1.7□□□□□ -2.14
SPCS3-202ENST00000507001 HIST1H2BLQ99880 126 aa1.7□□□□□ -2.14
SPCS3-202ENST00000507001 MED29Q9NX70 200 aa1.7□□□□□ -2.14
SPCS3-202ENST00000507001 OR52A1Q9UKL2 312 aa1.7□□□□□ -2.14
SPCS3-202ENST00000507001 EPDR1Q9UM22 224 aa1.7□□□□□ -2.14
SPCS3-202ENST00000507001 ARHGEF10O15013 1369 aa1.7□□□□□ -2.14
SPCS3-202ENST00000507001 KTN1Q86UP2 1357 aaKnown RBP1.7□□□□□ -2.14
SPCS3-202ENST00000507001 KIF14Q15058 1648 aa1.69□□□□□ -2.14
SPCS3-202ENST00000507001 ARHGAP35Q9NRY4 1499 aa1.69□□□□□ -2.14
SPCS3-202ENST00000507001 CEP164Q9UPV0 1460 aa1.69□□□□□ -2.14
SPCS3-202ENST00000507001 PCDH15Q96QU1 1955 aa1.69□□□□□ -2.14
SPCS3-202ENST00000507001 TROQ12816 1431 aaPredicted RBP1.69□□□□□ -2.14
SPCS3-202ENST00000507001 UACAQ9BZF9 1416 aa1.69□□□□□ -2.14
SPCS3-202ENST00000507001 TRBV19A0A075B6N1 114 aa1.69□□□□□ -2.14
SPCS3-202ENST00000507001 A0A1B0GV72 72 aa1.69□□□□□ -2.14
SPCS3-202ENST00000507001 C9orf170A2RU37 121 aa1.69□□□□□ -2.14
SPCS3-202ENST00000507001 LINC00587B1AMM8 73 aa1.69□□□□□ -2.14
SPCS3-202ENST00000507001 FAM25AB3EWG3 89 aa1.69□□□□□ -2.14
SPCS3-202ENST00000507001 FAM25CB3EWG5 89 aa1.69□□□□□ -2.14
SPCS3-202ENST00000507001 FAM25GB3EWG6 89 aa1.69□□□□□ -2.14
SPCS3-202ENST00000507001 C19orf84I3L1E1 186 aa1.69□□□□□ -2.14
SPCS3-202ENST00000507001 J3QRK9 145 aa1.69□□□□□ -2.14
SPCS3-202ENST00000507001 OR2T1O43869 369 aa1.69□□□□□ -2.14
SPCS3-202ENST00000507001 C1QBP02746 253 aa1.69□□□□□ -2.14
SPCS3-202ENST00000507001 OGNP20774 298 aaKnown RBP1.69□□□□□ -2.14
SPCS3-202ENST00000507001 SURF2Q15527 256 aaPredicted RBP1.69□□□□□ -2.14
SPCS3-202ENST00000507001 RPL13AP3Q6NVV1 102 aa1.69□□□□□ -2.14
SPCS3-202ENST00000507001 LYG2Q86SG7 212 aa1.69□□□□□ -2.14
SPCS3-202ENST00000507001 AP3S1Q92572 193 aa1.69□□□□□ -2.14
SPCS3-202ENST00000507001 C12orf57Q99622 126 aa1.69□□□□□ -2.14
SPCS3-202ENST00000507001 REG4Q9BYZ8 158 aa1.69□□□□□ -2.14
SPCS3-202ENST00000507001 MIXL1Q9H2W2 232 aa1.69□□□□□ -2.14
SPCS3-202ENST00000507001 RNF122Q9H9V4 155 aa1.69□□□□□ -2.14
SPCS3-202ENST00000507001 COA4Q9NYJ1 87 aa1.69□□□□□ -2.14
SPCS3-202ENST00000507001 TAS2R4Q9NYW5 299 aa1.69□□□□□ -2.14
SPCS3-202ENST00000507001 NDUFAF1Q9Y375 327 aa1.69□□□□□ -2.14
SPCS3-202ENST00000507001 COL4A1P02462 1669 aa1.69□□□□□ -2.14
SPCS3-202ENST00000507001 TOP2AP11388 1531 aaKnown RBP1.69□□□□□ -2.14
SPCS3-202ENST00000507001 CDK13Q14004 1512 aaKnown RBP1.69□□□□□ -2.14
SPCS3-202ENST00000507001 ZMYM4Q5VZL5 1548 aa1.69□□□□□ -2.14
SPCS3-202ENST00000507001 LMTK2Q8IWU2 1503 aa1.69□□□□□ -2.14
SPCS3-202ENST00000507001 SHROOM2Q13796 1616 aa1.69□□□□□ -2.14
SPCS3-202ENST00000507001 PSME4Q14997 1843 aa1.68□□□□□ -2.14
SPCS3-202ENST00000507001 WNK3Q9BYP7 1800 aa1.68□□□□□ -2.14
SPCS3-202ENST00000507001 PLXND1Q9Y4D7 1925 aa1.68□□□□□ -2.14
SPCS3-202ENST00000507001 TRAPPC8Q9Y2L5 1435 aa1.68□□□□□ -2.14
SPCS3-202ENST00000507001 IGKV2-29A2NJV5 120 aaPredicted RBP1.68□□□□□ -2.14
SPCS3-202ENST00000507001 SULT1C4O75897 302 aa1.68□□□□□ -2.14
SPCS3-202ENST00000507001 FAM107AO95990 144 aa1.68□□□□□ -2.14
SPCS3-202ENST00000507001 G0S2P27469 103 aa1.68□□□□□ -2.14
SPCS3-202ENST00000507001 RNASE4P34096 147 aaKnown RBP1.68□□□□□ -2.14
SPCS3-202ENST00000507001 SSR2P43308 183 aa1.68□□□□□ -2.14
SPCS3-202ENST00000507001 EIF5AP63241 154 aaKnown RBP1.68□□□□□ -2.14
SPCS3-202ENST00000507001 TSNQ15631 228 aaKnown RBP1.68□□□□□ -2.14
SPCS3-202ENST00000507001 RRN3P1Q2M238 152 aa1.68□□□□□ -2.14
SPCS3-202ENST00000507001 SPANXN5Q5MJ07 72 aa1.68□□□□□ -2.14
SPCS3-202ENST00000507001 Q6ZSA8 131 aa1.68□□□□□ -2.14
SPCS3-202ENST00000507001 LINC00299Q6ZSB3 139 aa1.68□□□□□ -2.14
SPCS3-202ENST00000507001 EXOC3-AS1Q8N2X6 119 aa1.68□□□□□ -2.14
SPCS3-202ENST00000507001 LINC00311Q8N616 119 aa1.68□□□□□ -2.14
SPCS3-202ENST00000507001 NEK7Q8TDX7 302 aa1.68□□□□□ -2.14
SPCS3-202ENST00000507001 MAFIPQ8WZ33 124 aa1.68□□□□□ -2.14
SPCS3-202ENST00000507001 TMEM203Q969S6 136 aa1.68□□□□□ -2.14
SPCS3-202ENST00000507001 PPP3R2Q96LZ3 170 aa1.68□□□□□ -2.14
SPCS3-202ENST00000507001 TRABDQ9H4I3 376 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms