RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 OR11H6Q8NGC7 330 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 OR10P1Q8NGE3 313 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 OR1L6Q8NGR2 347 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 DTD1Q8TEA8 209 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 RPEQ96AT9 228 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 GPR146Q96CH1 333 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 MALSU1Q96EH3 234 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 FAM210AQ96ND0 272 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 ATP5SQ99766 215 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 PBDC1Q9BVG4 233 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 PARD6GQ9BYG4 376 aaPredicted RBP1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 COMMD5Q9GZQ3 224 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 IFI27L2Q9H2X8 130 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 SMDT1Q9H4I9 107 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 SLC35D1Q9NTN3 355 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 BET1LQ9NYM9 111 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 PSENENQ9NZ42 101 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 NUP50Q9UKX7 468 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 WASHC3Q9Y3C0 194 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 TBL2Q9Y4P3 447 aaKnown RBP1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 MINOS1-NBL1R4GNA1 71 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 SMG1Q96Q15 3661 aaKnown RBP1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 ASPMQ8IZT6 3477 aa1.71□□□□□ -2.14
TOPBP1-205ENST00000506779 TNRC6AQ8NDV7 1962 aaKnown RBP1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 FREM3P0C091 2139 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 IGHV2-26A0A0B4J1V2 119 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 IGHV3-43A0A0B4J1X8 118 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 RAB19A4D1S5 217 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 LINC00862A6NCI5 91 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 B4DSR2 109 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 FNDC10F2Z333 226 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 INS-IGF2F8WCM5 200 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 J3QKU1 62 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 J3QLI3 93 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 UPK2O00526 184 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 UBR5O95071 2799 aaPredicted RBP1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 S1PR2O95136 353 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 CRYZL1O95825 349 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 MT-CO2P00403 227 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 IGKV1-5P01602 117 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 IGLV1-47P01700 117 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 IGHV2-5P01817 119 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 HBE1P02100 147 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 PRH1P02810 166 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 TFF1P04155 84 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 IFNA4P05014 189 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 ARG1P05089 322 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 FABP1P07148 127 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 OR8U8P0C7N1 319 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 IGHV3-43DP0DP04 118 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 SLC25A16P16260 332 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 CCL3L1P16619 93 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 CD1BP29016 333 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 S100A7P31151 101 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 GNG10P50151 68 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 PPT1P50897 306 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 UBE2E1P51965 193 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 ATP5J2P56134 94 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 DLX6P56179 175 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 OR2B8PP59922 312 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 RPL30P62888 115 aaKnown RBP1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 IFITM2Q01629 132 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 ZNF816Q0VGE8 651 aaPredicted RBP1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 PEA15Q15121 130 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 HLA-DRB5Q30154 266 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 RPL39P5Q59GN2 51 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 AKR1C8PQ5T2L2 129 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 AVPI1Q5T686 147 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 ALKAL2Q6UX46 152 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 IGSF10Q6WRI0 2623 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 MOB3BQ86TA1 216 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 LRRC75A-AS1Q8N1F1 130 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 STPG2Q8N412 459 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 EIF4E3Q8N5X7 224 aaKnown RBP1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 NBEAQ8NFP9 2946 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 OR5C1Q8NGR4 320 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 OR1L8Q8NGR8 309 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 OR2G3Q8NGZ4 309 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 OR2T10Q8NGZ9 312 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 LHFPL5Q8TAF8 219 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 UBALD1Q8TB05 177 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 TMEM167AQ8TBQ9 72 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 SUN5Q8TC36 379 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 RNASEH2CQ8TDP1 164 aaKnown RBP1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 CACNG8Q8WXS5 425 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 C22orf15Q8WYQ4 148 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 LEAP2Q969E1 77 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 MARC2Q969Z3 335 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 DOCK10Q96BY6 2186 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 RBMXL1Q96E39 390 aaKnown RBP1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 NABP2Q9BQ15 211 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 GINS3Q9BRX5 216 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 PSMG3Q9BT73 122 aaPredicted RBP1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 TMEM147Q9BVK8 224 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 PARP12Q9H0J9 701 aaKnown RBP1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 MAGT1Q9H0U3 335 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 ARV1Q9H2C2 271 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 RBKSQ9H477 322 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 NPVFQ9HCQ7 196 aa1.7□□□□□ -2.14
TOPBP1-205ENST00000506779 PARP11Q9NR21 331 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms