RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 FABP1P07148 127 aa6.59□□□□□ -1.35
PDLIM5-209ENST00000506632 INPP1P49441 399 aa6.59□□□□□ -1.35
PDLIM5-209ENST00000506632 LYZP61626 148 aa6.59□□□□□ -1.35
PDLIM5-209ENST00000506632 SNRPD3P62318 126 aaKnown RBP6.59□□□□□ -1.35
PDLIM5-209ENST00000506632 RPP30P78346 268 aaKnown RBP6.59□□□□□ -1.35
PDLIM5-209ENST00000506632 ACTL10Q5JWF8 245 aa6.59□□□□□ -1.35
PDLIM5-209ENST00000506632 PHLDA1Q8WV24 401 aaPredicted RBP6.59□□□□□ -1.35
PDLIM5-209ENST00000506632 PBDC1Q9BVG4 233 aa6.59□□□□□ -1.35
PDLIM5-209ENST00000506632 NDUFA13Q9P0J0 144 aa6.59□□□□□ -1.35
PDLIM5-209ENST00000506632 LINC00854A0A1B0GVQ3 168 aa6.58□□□□□ -1.36
PDLIM5-209ENST00000506632 PMS2P5A8MQ11 134 aa6.58□□□□□ -1.36
PDLIM5-209ENST00000506632 SNRPGP15A8MWD9 76 aa6.58□□□□□ -1.36
PDLIM5-209ENST00000506632 H3BMM0 161 aa6.58□□□□□ -1.36
PDLIM5-209ENST00000506632 H3BP45 60 aa6.58□□□□□ -1.36
PDLIM5-209ENST00000506632 PLA2G10O15496 165 aa6.58□□□□□ -1.36
PDLIM5-209ENST00000506632 CFDP00746 253 aaPredicted RBP6.58□□□□□ -1.36
PDLIM5-209ENST00000506632 RBMY1A1P0DJD3 496 aaKnown RBP6.58□□□□□ -1.36
PDLIM5-209ENST00000506632 RBMY1CP0DJD4 496 aa6.58□□□□□ -1.36
PDLIM5-209ENST00000506632 HLA-DRB4P13762 266 aa6.58□□□□□ -1.36
PDLIM5-209ENST00000506632 ANXA7P20073 488 aaKnown RBP6.58□□□□□ -1.36
PDLIM5-209ENST00000506632 NKX2-1P43699 371 aaPredicted RBP6.58□□□□□ -1.36
PDLIM5-209ENST00000506632 POLR2GP62487 172 aaKnown RBP eCLIP6.58□□□□□ -1.36
PDLIM5-209ENST00000506632 OR2F1Q13607 317 aa6.58□□□□□ -1.36
PDLIM5-209ENST00000506632 RBMY1FQ15415 496 aaKnown RBP6.58□□□□□ -1.36
PDLIM5-209ENST00000506632 SPANXN5Q5MJ07 72 aa6.58□□□□□ -1.36
PDLIM5-209ENST00000506632 CDPF1Q6NVV7 123 aa6.58□□□□□ -1.36
PDLIM5-209ENST00000506632 ACOT7LQ6ZUV0 252 aa6.58□□□□□ -1.36
PDLIM5-209ENST00000506632 COQ8AQ8NI60 647 aa6.58□□□□□ -1.36
PDLIM5-209ENST00000506632 WDR12Q9GZL7 423 aaKnown RBP6.58□□□□□ -1.36
PDLIM5-209ENST00000506632 MFFQ9GZY8 342 aa6.58□□□□□ -1.36
PDLIM5-209ENST00000506632 FBXL17Q9UF56 701 aa6.58□□□□□ -1.36
PDLIM5-209ENST00000506632 PAIP2BQ9ULR5 123 aaKnown RBP6.58□□□□□ -1.36
PDLIM5-209ENST00000506632 SLC45A2Q9UMX9 530 aa6.58□□□□□ -1.36
PDLIM5-209ENST00000506632 KLK5Q9Y337 293 aaPredicted RBP6.58□□□□□ -1.36
PDLIM5-209ENST00000506632 STRAPQ9Y3F4 350 aaKnown RBP6.58□□□□□ -1.36
PDLIM5-209ENST00000506632 HLA-DRB4X5D2U9 266 aa6.58□□□□□ -1.36
PDLIM5-209ENST00000506632 X6R8D5 127 aa6.58□□□□□ -1.36
PDLIM5-209ENST00000506632 IGHV4-28A0A0C4DH34 117 aa6.57□□□□□ -1.36
PDLIM5-209ENST00000506632 CENPXA8MT69 81 aa6.57□□□□□ -1.36
PDLIM5-209ENST00000506632 ZNF561-AS1K7EIQ3 104 aa6.57□□□□□ -1.36
PDLIM5-209ENST00000506632 DEFB4AO15263 64 aa6.57□□□□□ -1.36
PDLIM5-209ENST00000506632 IFNA21P01568 189 aa6.57□□□□□ -1.36
PDLIM5-209ENST00000506632 MIFP14174 115 aa6.57□□□□□ -1.36
PDLIM5-209ENST00000506632 PSMB3P49720 205 aa6.57□□□□□ -1.36
PDLIM5-209ENST00000506632 PAX9P55771 341 aa6.57□□□□□ -1.36
PDLIM5-209ENST00000506632 NANOS2P60321 138 aaKnown RBP6.57□□□□□ -1.36
PDLIM5-209ENST00000506632 CNPY1Q3B7I2 92 aa6.57□□□□□ -1.36
PDLIM5-209ENST00000506632 TMEM182Q6ZP80 229 aaPredicted RBP6.57□□□□□ -1.36
PDLIM5-209ENST00000506632 TMEM144Q7Z5S9 345 aa6.57□□□□□ -1.36
PDLIM5-209ENST00000506632 C11orf45Q8TAV5 145 aa6.57□□□□□ -1.36
PDLIM5-209ENST00000506632 MITD1Q8WV92 249 aa6.57□□□□□ -1.36
PDLIM5-209ENST00000506632 SMIM8Q96KF7 97 aa6.57□□□□□ -1.36
PDLIM5-209ENST00000506632 C17orf77Q96MU5 243 aa6.57□□□□□ -1.36
PDLIM5-209ENST00000506632 HRH4Q9H3N8 390 aa6.57□□□□□ -1.36
PDLIM5-209ENST00000506632 EPPK1P58107 5090 aaKnown RBP6.57□□□□□ -1.36
PDLIM5-209ENST00000506632 ZNF98A6NK75 572 aa6.56□□□□□ -1.36
PDLIM5-209ENST00000506632 LYRM1O43325 122 aa6.56□□□□□ -1.36
PDLIM5-209ENST00000506632 CCNKO75909 580 aa6.56□□□□□ -1.36
PDLIM5-209ENST00000506632 GATA2P23769 480 aaPredicted RBP6.56□□□□□ -1.36
PDLIM5-209ENST00000506632 GDF5OSQ5U4N7 250 aa6.56□□□□□ -1.36
PDLIM5-209ENST00000506632 TMEM14EPQ6UXP3 125 aa6.56□□□□□ -1.36
PDLIM5-209ENST00000506632 BPIFCQ8NFQ6 507 aa6.56□□□□□ -1.36
PDLIM5-209ENST00000506632 C1QTNF4Q9BXJ3 329 aa6.56□□□□□ -1.36
PDLIM5-209ENST00000506632 SLC25A32Q9H2D1 315 aa6.56□□□□□ -1.36
PDLIM5-209ENST00000506632 CDIP1Q9H305 208 aa6.56□□□□□ -1.36
PDLIM5-209ENST00000506632 SAV1Q9H4B6 383 aaPredicted RBP6.56□□□□□ -1.36
PDLIM5-209ENST00000506632 CLEC5AQ9NY25 188 aa6.56□□□□□ -1.36
PDLIM5-209ENST00000506632 PSENENQ9NZ42 101 aa6.56□□□□□ -1.36
PDLIM5-209ENST00000506632 TBC1D24Q9ULP9 559 aa6.56□□□□□ -1.36
PDLIM5-209ENST00000506632 RCL1Q9Y2P8 373 aaKnown RBP6.56□□□□□ -1.36
PDLIM5-209ENST00000506632 FNDC10F2Z333 226 aa6.55□□□□□ -1.36
PDLIM5-209ENST00000506632 ISLRO14498 428 aa6.55□□□□□ -1.36
PDLIM5-209ENST00000506632 SSSCA1O60232 199 aa6.55□□□□□ -1.36
PDLIM5-209ENST00000506632 TSC22D2O75157 780 aa6.55□□□□□ -1.36
PDLIM5-209ENST00000506632 LY6G6CO95867 125 aa6.55□□□□□ -1.36
PDLIM5-209ENST00000506632 TCRBP04435 133 aa6.55□□□□□ -1.36
PDLIM5-209ENST00000506632 ID1P41134 155 aa6.55□□□□□ -1.36
PDLIM5-209ENST00000506632 MEOX2P50222 304 aa6.55□□□□□ -1.36
PDLIM5-209ENST00000506632 TAS2R30P59541 319 aa6.55□□□□□ -1.36
PDLIM5-209ENST00000506632 DEFB1P60022 68 aa6.55□□□□□ -1.36
PDLIM5-209ENST00000506632 PLP1P60201 277 aa6.55□□□□□ -1.36
PDLIM5-209ENST00000506632 NUTF2P61970 127 aaKnown RBP6.55□□□□□ -1.36
PDLIM5-209ENST00000506632 DLK1P80370 383 aa6.55□□□□□ -1.36
PDLIM5-209ENST00000506632 AKR1C1Q04828 323 aa6.55□□□□□ -1.36
PDLIM5-209ENST00000506632 IAH1Q2TAA2 248 aaPredicted RBP6.55□□□□□ -1.36
PDLIM5-209ENST00000506632 SAMD13Q5VXD3 122 aa6.55□□□□□ -1.36
PDLIM5-209ENST00000506632 FOXI2Q6ZQN5 318 aa6.55□□□□□ -1.36
PDLIM5-209ENST00000506632 LINC00299Q6ZSB3 139 aa6.55□□□□□ -1.36
PDLIM5-209ENST00000506632 OR8I2Q8N0Y5 310 aa6.55□□□□□ -1.36
PDLIM5-209ENST00000506632 ZNF709Q8N972 641 aa6.55□□□□□ -1.36
PDLIM5-209ENST00000506632 ZBTB8BQ8NAP8 495 aaPredicted RBP6.55□□□□□ -1.36
PDLIM5-209ENST00000506632 PPP1R14BQ96C90 147 aa6.55□□□□□ -1.36
PDLIM5-209ENST00000506632 C20orf85Q9H1P6 137 aa6.55□□□□□ -1.36
PDLIM5-209ENST00000506632 XCL2Q9UBD3 114 aa6.55□□□□□ -1.36
PDLIM5-209ENST00000506632 A8MTW9 85 aa6.54□□□□□ -1.36
PDLIM5-209ENST00000506632 ZNF705FA8MVS1 300 aaPredicted RBP6.54□□□□□ -1.36
PDLIM5-209ENST00000506632 C11orf94C9JXX5 98 aa6.54□□□□□ -1.36
PDLIM5-209ENST00000506632 H3BRN7 92 aa6.54□□□□□ -1.36
PDLIM5-209ENST00000506632 K7EPK0 472 aa6.54□□□□□ -1.36
PDLIM5-209ENST00000506632 MBPP02686 304 aaPredicted RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms