RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 TRAV20A0A0B4J274 112 aa7.72□□□□□ -1.17
COL1A1-210ENST00000504289 A0A1W2PPQ1 181 aa7.72□□□□□ -1.17
COL1A1-210ENST00000504289 H3BRN7 92 aa7.72□□□□□ -1.17
COL1A1-210ENST00000504289 K7EN84 100 aa7.72□□□□□ -1.17
COL1A1-210ENST00000504289 M0QZK8 103 aa7.72□□□□□ -1.17
COL1A1-210ENST00000504289 NDUFB8O95169 186 aa7.72□□□□□ -1.17
COL1A1-210ENST00000504289 IGHV3-48P01763 117 aa7.72□□□□□ -1.17
COL1A1-210ENST00000504289 PYYP10082 97 aa7.72□□□□□ -1.17
COL1A1-210ENST00000504289 EGR2P11161 476 aaPredicted RBP7.72□□□□□ -1.17
COL1A1-210ENST00000504289 RAB9AP51151 201 aa7.72□□□□□ -1.17
COL1A1-210ENST00000504289 RPEL1Q2QD12 228 aa7.72□□□□□ -1.17
COL1A1-210ENST00000504289 ACTL10Q5JWF8 245 aa7.72□□□□□ -1.17
COL1A1-210ENST00000504289 ZNF491Q8N8L2 437 aa7.72□□□□□ -1.17
COL1A1-210ENST00000504289 RNF125Q96EQ8 232 aa7.72□□□□□ -1.17
COL1A1-210ENST00000504289 FMC1Q96HJ9 113 aa7.72□□□□□ -1.17
COL1A1-210ENST00000504289 IGHV4-61A0A0C4DH41 118 aa7.71□□□□□ -1.18
COL1A1-210ENST00000504289 SERTM2A0A1B0GWG4 89 aa7.71□□□□□ -1.18
COL1A1-210ENST00000504289 FBLL1A6NHQ2 334 aaKnown RBP7.71□□□□□ -1.18
COL1A1-210ENST00000504289 B4DSR2 109 aa7.71□□□□□ -1.18
COL1A1-210ENST00000504289 IGLV2-8P01709 118 aa7.71□□□□□ -1.18
COL1A1-210ENST00000504289 MT-ND6P03923 174 aa7.71□□□□□ -1.18
COL1A1-210ENST00000504289 TRGC1P0CF51 173 aa7.71□□□□□ -1.18
COL1A1-210ENST00000504289 APELAP0DMC3 54 aa7.71□□□□□ -1.18
COL1A1-210ENST00000504289 PLA2G2AP14555 144 aa7.71□□□□□ -1.18
COL1A1-210ENST00000504289 MEOX2P50222 304 aa7.71□□□□□ -1.18
COL1A1-210ENST00000504289 ERVFC1-1P60608 527 aa7.71□□□□□ -1.18
COL1A1-210ENST00000504289 LYZP61626 148 aa7.71□□□□□ -1.18
COL1A1-210ENST00000504289 RUSC1-AS1Q66K80 236 aa7.71□□□□□ -1.18
COL1A1-210ENST00000504289 RASL11AQ6T310 242 aa7.71□□□□□ -1.18
COL1A1-210ENST00000504289 ZNF600Q6ZNG1 722 aa7.71□□□□□ -1.18
COL1A1-210ENST00000504289 OR5T1Q8NG75 326 aa7.71□□□□□ -1.18
COL1A1-210ENST00000504289 OR4F17Q8NGA8 305 aa7.71□□□□□ -1.18
COL1A1-210ENST00000504289 FRZBQ92765 325 aa7.71□□□□□ -1.18
COL1A1-210ENST00000504289 GPR82Q96P67 336 aa7.71□□□□□ -1.18
COL1A1-210ENST00000504289 MOB4Q9Y3A3 225 aa7.71□□□□□ -1.18
COL1A1-210ENST00000504289 V9GYV3 84 aa7.71□□□□□ -1.18
COL1A1-210ENST00000504289 USP9XQ93008 2570 aaPredicted RBP7.71□□□□□ -1.18
COL1A1-210ENST00000504289 A0A0U1RQK1 487 aa7.7□□□□□ -1.18
COL1A1-210ENST00000504289 ZNF320A2RRD8 509 aa7.7□□□□□ -1.18
COL1A1-210ENST00000504289 PGPA6NDG6 321 aa7.7□□□□□ -1.18
COL1A1-210ENST00000504289 J3QLI3 93 aa7.7□□□□□ -1.18
COL1A1-210ENST00000504289 SLC25A5P05141 298 aaKnown RBP7.7□□□□□ -1.18
COL1A1-210ENST00000504289 MSMBP08118 114 aa7.7□□□□□ -1.18
COL1A1-210ENST00000504289 COX6B1P14854 86 aa7.7□□□□□ -1.18
COL1A1-210ENST00000504289 CD24P25063 80 aa7.7□□□□□ -1.18
COL1A1-210ENST00000504289 NDUFA6P56556 154 aa7.7□□□□□ -1.18
COL1A1-210ENST00000504289 RPL15P61313 204 aaKnown RBP7.7□□□□□ -1.18
COL1A1-210ENST00000504289 UBE2G1P62253 170 aa7.7□□□□□ -1.18
COL1A1-210ENST00000504289 RANP62826 216 aaKnown RBP7.7□□□□□ -1.18
COL1A1-210ENST00000504289 NDPQ00604 133 aa7.7□□□□□ -1.18
COL1A1-210ENST00000504289 CT83Q5H943 113 aa7.7□□□□□ -1.18
COL1A1-210ENST00000504289 DNLZQ5SXM8 178 aa7.7□□□□□ -1.18
COL1A1-210ENST00000504289 IBA57Q5T440 356 aaKnown RBP7.7□□□□□ -1.18
COL1A1-210ENST00000504289 WDR73Q6P4I2 378 aa7.7□□□□□ -1.18
COL1A1-210ENST00000504289 C19orf35Q6ZS72 473 aa7.7□□□□□ -1.18
COL1A1-210ENST00000504289 BAGE2Q86Y30 109 aa7.7□□□□□ -1.18
COL1A1-210ENST00000504289 ZNF843Q8N446 348 aa7.7□□□□□ -1.18
COL1A1-210ENST00000504289 PIP4P2Q8N4L2 257 aa7.7□□□□□ -1.18
COL1A1-210ENST00000504289 NECAP1Q8NC96 275 aa7.7□□□□□ -1.18
COL1A1-210ENST00000504289 AKAP6Q13023 2319 aa7.7□□□□□ -1.18
COL1A1-210ENST00000504289 TACC2O95359 2948 aa7.7□□□□□ -1.18
COL1A1-210ENST00000504289 MED13LQ71F56 2210 aa7.7□□□□□ -1.18
COL1A1-210ENST00000504289 FLNCQ14315 2725 aa7.69□□□□□ -1.18
COL1A1-210ENST00000504289 TRBV19A0A075B6N1 114 aa7.69□□□□□ -1.18
COL1A1-210ENST00000504289 TRBV7-1A0A0A6YYK4 115 aa7.69□□□□□ -1.18
COL1A1-210ENST00000504289 IGHV3-21A0A0B4J1V1 117 aa7.69□□□□□ -1.18
COL1A1-210ENST00000504289 SMIM27A0A1W2PRY6 76 aa7.69□□□□□ -1.18
COL1A1-210ENST00000504289 PGPEP1LA6NFU8 196 aa7.69□□□□□ -1.18
COL1A1-210ENST00000504289 H3BUA1 57 aa7.69□□□□□ -1.18
COL1A1-210ENST00000504289 K7EQM0 130 aa7.69□□□□□ -1.18
COL1A1-210ENST00000504289 ZNF253O75346 499 aa7.69□□□□□ -1.18
COL1A1-210ENST00000504289 TCRAP04437 139 aa7.69□□□□□ -1.18
COL1A1-210ENST00000504289 IGLC2P0DOY2 106 aa7.69□□□□□ -1.18
COL1A1-210ENST00000504289 S100A2P29034 98 aa7.69□□□□□ -1.18
COL1A1-210ENST00000504289 Q56UQ5 140 aa7.69□□□□□ -1.18
COL1A1-210ENST00000504289 FAM120AOSQ5T036 256 aa7.69□□□□□ -1.18
COL1A1-210ENST00000504289 UNQ5815/PRO19632Q6UWF5 114 aa7.69□□□□□ -1.18
COL1A1-210ENST00000504289 TMEM183AQ8IXX5 376 aa7.69□□□□□ -1.18
COL1A1-210ENST00000504289 C5orf56Q8N8D9 126 aa7.69□□□□□ -1.18
COL1A1-210ENST00000504289 FAM103A1Q9BTL3 118 aaKnown RBP7.69□□□□□ -1.18
COL1A1-210ENST00000504289 GNB1LQ9BYB4 327 aa7.69□□□□□ -1.18
COL1A1-210ENST00000504289 Q9H3A6 140 aa7.69□□□□□ -1.18
COL1A1-210ENST00000504289 ZNF492Q9P255 531 aa7.69□□□□□ -1.18
COL1A1-210ENST00000504289 FBXL7Q9UJT9 491 aa7.69□□□□□ -1.18
COL1A1-210ENST00000504289 ZNF580Q9UK33 172 aa7.69□□□□□ -1.18
COL1A1-210ENST00000504289 DOPEY2Q9Y3R5 2298 aa7.68□□□□□ -1.18
COL1A1-210ENST00000504289 FAM231BA6NCW3 169 aa7.68□□□□□ -1.18
COL1A1-210ENST00000504289 FAM223BA6NKX1 122 aa7.68□□□□□ -1.18
COL1A1-210ENST00000504289 F8W735 103 aaPredicted RBP7.68□□□□□ -1.18
COL1A1-210ENST00000504289 BMPR1BO00238 502 aa7.68□□□□□ -1.18
COL1A1-210ENST00000504289 MRPS12O15235 138 aaKnown RBP7.68□□□□□ -1.18
COL1A1-210ENST00000504289 LTAP01374 205 aa7.68□□□□□ -1.18
COL1A1-210ENST00000504289 IGF1P05019 195 aa7.68□□□□□ -1.18
COL1A1-210ENST00000504289 IL4P05112 153 aa7.68□□□□□ -1.18
COL1A1-210ENST00000504289 CTSGP08311 255 aa7.68□□□□□ -1.18
COL1A1-210ENST00000504289 RPL7P18124 248 aaKnown RBP7.68□□□□□ -1.18
COL1A1-210ENST00000504289 PSG9Q00887 426 aa7.68□□□□□ -1.18
COL1A1-210ENST00000504289 FAM223AQ8IWN6 122 aa7.68□□□□□ -1.18
COL1A1-210ENST00000504289 HIST3H2BBQ8N257 126 aa7.68□□□□□ -1.18
COL1A1-210ENST00000504289 CMTM2Q8TAZ6 248 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms