RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 CSN2P05814 226 aa2.04□□□□□ -2.08
TRAPPC13-205ENST00000504243 SMIM10L2AP0DMW4 78 aa2.04□□□□□ -2.08
TRAPPC13-205ENST00000504243 SMIM10L2BP0DMW5 78 aa2.04□□□□□ -2.08
TRAPPC13-205ENST00000504243 RPL7P18124 248 aaKnown RBP2.04□□□□□ -2.08
TRAPPC13-205ENST00000504243 RPS3P23396 243 aaKnown RBP eCLIP2.04□□□□□ -2.08
TRAPPC13-205ENST00000504243 SRIP30626 198 aa2.04□□□□□ -2.08
TRAPPC13-205ENST00000504243 TAS2R20P59543 309 aa2.04□□□□□ -2.08
TRAPPC13-205ENST00000504243 RPS25P62851 125 aaKnown RBP2.04□□□□□ -2.08
TRAPPC13-205ENST00000504243 HBA1P69905 142 aa2.04□□□□□ -2.08
TRAPPC13-205ENST00000504243 HSD17B12Q53GQ0 312 aa2.04□□□□□ -2.08
TRAPPC13-205ENST00000504243 TEX261Q6UWH6 196 aa2.04□□□□□ -2.08
TRAPPC13-205ENST00000504243 SSX8Q7RTT4 187 aa2.04□□□□□ -2.08
TRAPPC13-205ENST00000504243 PPTC7Q8NI37 304 aa2.04□□□□□ -2.08
TRAPPC13-205ENST00000504243 SLC25A40Q8TBP6 338 aa2.04□□□□□ -2.08
TRAPPC13-205ENST00000504243 ZNF418Q8TF45 676 aaPredicted RBP2.04□□□□□ -2.08
TRAPPC13-205ENST00000504243 DCANP1Q8TF63 244 aa2.04□□□□□ -2.08
TRAPPC13-205ENST00000504243 NEO1Q92859 1461 aa2.04□□□□□ -2.08
TRAPPC13-205ENST00000504243 Q9BRP9 147 aa2.04□□□□□ -2.08
TRAPPC13-205ENST00000504243 PRADC1Q9BSG0 188 aa2.04□□□□□ -2.08
TRAPPC13-205ENST00000504243 TTTY13Q9BZ97 58 aa2.04□□□□□ -2.08
TRAPPC13-205ENST00000504243 OR8D2Q9GZM6 311 aa2.04□□□□□ -2.08
TRAPPC13-205ENST00000504243 LPAR5Q9H1C0 372 aa2.04□□□□□ -2.08
TRAPPC13-205ENST00000504243 CXCL16Q9H2A7 254 aa2.04□□□□□ -2.08
TRAPPC13-205ENST00000504243 TCEAL2Q9H3H9 227 aaPredicted RBP2.04□□□□□ -2.08
TRAPPC13-205ENST00000504243 IBTKQ9P2D0 1353 aaPredicted RBP2.04□□□□□ -2.08
TRAPPC13-205ENST00000504243 CKLFQ9UBR5 152 aa2.04□□□□□ -2.08
TRAPPC13-205ENST00000504243 CYSLTR1Q9Y271 337 aa2.04□□□□□ -2.08
TRAPPC13-205ENST00000504243 MED31Q9Y3C7 131 aa2.04□□□□□ -2.08
TRAPPC13-205ENST00000504243 NYNRINQ9P2P1 1898 aaKnown RBP2.03□□□□□ -2.08
TRAPPC13-205ENST00000504243 ECM29Q5VYK3 1845 aa2.03□□□□□ -2.08
TRAPPC13-205ENST00000504243 ADAMTS7Q9UKP4 1686 aa2.03□□□□□ -2.08
TRAPPC13-205ENST00000504243 DISP2A7MBM2 1401 aa2.03□□□□□ -2.08
TRAPPC13-205ENST00000504243 TNS3Q68CZ2 1445 aa2.03□□□□□ -2.08
TRAPPC13-205ENST00000504243 FMN1Q68DA7 1419 aa2.03□□□□□ -2.08
TRAPPC13-205ENST00000504243 TRAV4A0A0B4J268 109 aa2.03□□□□□ -2.08
TRAPPC13-205ENST00000504243 A0A0G2JQZ4 141 aa2.03□□□□□ -2.08
TRAPPC13-205ENST00000504243 DPRXA6NFQ7 191 aa2.03□□□□□ -2.08
TRAPPC13-205ENST00000504243 IFITM5A6NNB3 132 aa2.03□□□□□ -2.08
TRAPPC13-205ENST00000504243 I3L521 148 aa2.03□□□□□ -2.08
TRAPPC13-205ENST00000504243 NCR2O95944 276 aa2.03□□□□□ -2.08
TRAPPC13-205ENST00000504243 NPYP01303 97 aa2.03□□□□□ -2.08
TRAPPC13-205ENST00000504243 IGKV1-5P01602 117 aa2.03□□□□□ -2.08
TRAPPC13-205ENST00000504243 APODP05090 189 aa2.03□□□□□ -2.08
TRAPPC13-205ENST00000504243 GPX1P07203 203 aa2.03□□□□□ -2.08
TRAPPC13-205ENST00000504243 SRP19P09132 144 aaKnown RBP2.03□□□□□ -2.08
TRAPPC13-205ENST00000504243 ZNF705DP0CH99 300 aaPredicted RBP2.03□□□□□ -2.08
TRAPPC13-205ENST00000504243 ZNF728P0DKX0 622 aa2.03□□□□□ -2.08
TRAPPC13-205ENST00000504243 CASP1P29466 404 aa2.03□□□□□ -2.08
TRAPPC13-205ENST00000504243 ATP5G3P48201 142 aa2.03□□□□□ -2.08
TRAPPC13-205ENST00000504243 EVX1P49640 407 aa2.03□□□□□ -2.08
TRAPPC13-205ENST00000504243 GNG4P50150 75 aa2.03□□□□□ -2.08
TRAPPC13-205ENST00000504243 KRTAP12-1P59990 96 aa2.03□□□□□ -2.08
TRAPPC13-205ENST00000504243 KRTAP12-4P60329 112 aa2.03□□□□□ -2.08
TRAPPC13-205ENST00000504243 MAXP61244 160 aa2.03□□□□□ -2.08
TRAPPC13-205ENST00000504243 ZNF90Q03938 601 aa2.03□□□□□ -2.08
TRAPPC13-205ENST00000504243 EIF3IQ13347 325 aaKnown RBP2.03□□□□□ -2.08
TRAPPC13-205ENST00000504243 MSMO1Q15800 293 aa2.03□□□□□ -2.08
TRAPPC13-205ENST00000504243 RTL8BQ17RB0 113 aa2.03□□□□□ -2.08
TRAPPC13-205ENST00000504243 GTF2H5Q6ZYL4 71 aa2.03□□□□□ -2.08
TRAPPC13-205ENST00000504243 CST9LQ9H4G1 147 aa2.03□□□□□ -2.08
TRAPPC13-205ENST00000504243 Q9H521 79 aa2.03□□□□□ -2.08
TRAPPC13-205ENST00000504243 NAT8Q9UHE5 227 aa2.03□□□□□ -2.08
TRAPPC13-205ENST00000504243 HS3ST2Q9Y278 367 aa2.03□□□□□ -2.08
TRAPPC13-205ENST00000504243 SOX21Q9Y651 276 aaPredicted RBP2.03□□□□□ -2.08
TRAPPC13-205ENST00000504243 UBR2Q8IWV8 1755 aa2.03□□□□□ -2.09
TRAPPC13-205ENST00000504243 NALCNQ8IZF0 1738 aa2.03□□□□□ -2.09
TRAPPC13-205ENST00000504243 TCOF1Q13428 1488 aaKnown RBP2.02□□□□□ -2.09
TRAPPC13-205ENST00000504243 TRAV30A0A087WSZ9 112 aa2.02□□□□□ -2.09
TRAPPC13-205ENST00000504243 TRGV5A0A0B4J1U4 118 aa2.02□□□□□ -2.09
TRAPPC13-205ENST00000504243 TRAV41A0A0B4J266 112 aa2.02□□□□□ -2.09
TRAPPC13-205ENST00000504243 PNMA8CA0A1B0GUJ8 204 aa2.02□□□□□ -2.09
TRAPPC13-205ENST00000504243 A0A1B0GVG6 124 aa2.02□□□□□ -2.09
TRAPPC13-205ENST00000504243 IRGMA1A4Y4 181 aa2.02□□□□□ -2.09
TRAPPC13-205ENST00000504243 BBIP1A8MTZ0 92 aa2.02□□□□□ -2.09
TRAPPC13-205ENST00000504243 PAEPP09466 180 aa2.02□□□□□ -2.09
TRAPPC13-205ENST00000504243 AKAIN1P0CW23 69 aa2.02□□□□□ -2.09
TRAPPC13-205ENST00000504243 HIST1H1DP16402 221 aaKnown RBP2.02□□□□□ -2.09
TRAPPC13-205ENST00000504243 AQP4P55087 323 aa2.02□□□□□ -2.09
TRAPPC13-205ENST00000504243 RBM11P57052 281 aaKnown RBP2.02□□□□□ -2.09
TRAPPC13-205ENST00000504243 PABPC1L2AQ5JQF8 200 aa2.02□□□□□ -2.09
TRAPPC13-205ENST00000504243 SPANXN3Q5MJ09 141 aa2.02□□□□□ -2.09
TRAPPC13-205ENST00000504243 FKBP1CQ5VVH2 108 aa2.02□□□□□ -2.09
TRAPPC13-205ENST00000504243 C10orf126Q8N4M7 172 aa2.02□□□□□ -2.09
TRAPPC13-205ENST00000504243 OR4S1Q8NGB4 309 aa2.02□□□□□ -2.09
TRAPPC13-205ENST00000504243 CLDND2Q8NHS1 167 aa2.02□□□□□ -2.09
TRAPPC13-205ENST00000504243 SFT2D1Q8WV19 159 aa2.02□□□□□ -2.09
TRAPPC13-205ENST00000504243 TOMM6Q96B49 74 aa2.02□□□□□ -2.09
TRAPPC13-205ENST00000504243 SLC25A21Q9BQT8 299 aaPredicted RBP2.02□□□□□ -2.09
TRAPPC13-205ENST00000504243 OR5AC2Q9NZP5 309 aa2.02□□□□□ -2.09
TRAPPC13-205ENST00000504243 CCDC167Q9P0B6 97 aa2.02□□□□□ -2.09
TRAPPC13-205ENST00000504243 SCP2D1Q9UJQ7 156 aa2.02□□□□□ -2.09
TRAPPC13-205ENST00000504243 TTC37Q6PGP7 1564 aa2.02□□□□□ -2.09
TRAPPC13-205ENST00000504243 ARHGEF11O15085 1522 aa2.01□□□□□ -2.09
TRAPPC13-205ENST00000504243 PXDNLA1KZ92 1463 aa2.01□□□□□ -2.09
TRAPPC13-205ENST00000504243 MYH7BA7E2Y1 1941 aa2.01□□□□□ -2.09
TRAPPC13-205ENST00000504243 NUP210LQ5VU65 1888 aa2.01□□□□□ -2.09
TRAPPC13-205ENST00000504243 TRDV1A0A1B0GX56 115 aa2.01□□□□□ -2.09
TRAPPC13-205ENST00000504243 TLCD2A6NGC4 264 aa2.01□□□□□ -2.09
TRAPPC13-205ENST00000504243 CLDN25C9JDP6 229 aa2.01□□□□□ -2.09
TRAPPC13-205ENST00000504243 KRTAP5-8O75690 187 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms