RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 PSMB9P28065 219 aa8.29□□□□□ -1.08
LSM6-204ENST00000504181 FABP5Q01469 135 aa8.29□□□□□ -1.08
LSM6-204ENST00000504181 ODF1Q14990 250 aa8.29□□□□□ -1.08
LSM6-204ENST00000504181 PHLDA2Q53GA4 152 aa8.29□□□□□ -1.08
LSM6-204ENST00000504181 LAIR2Q6ISS4 152 aa8.29□□□□□ -1.08
LSM6-204ENST00000504181 Q6ZTI0 123 aa8.29□□□□□ -1.08
LSM6-204ENST00000504181 LRTM2Q8N967 370 aa8.29□□□□□ -1.08
LSM6-204ENST00000504181 ENY2Q9NPA8 101 aa8.29□□□□□ -1.08
LSM6-204ENST00000504181 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.28□□□□□ -1.08
LSM6-204ENST00000504181 PDCD5O14737 125 aa8.28□□□□□ -1.08
LSM6-204ENST00000504181 NXPH3O95157 252 aa8.28□□□□□ -1.08
LSM6-204ENST00000504181 RHOBP62745 196 aa8.28□□□□□ -1.08
LSM6-204ENST00000504181 WFDC2Q14508 124 aa8.28□□□□□ -1.08
LSM6-204ENST00000504181 TRAM1Q15629 374 aa8.28□□□□□ -1.08
LSM6-204ENST00000504181 IGFL4Q6B9Z1 124 aa8.28□□□□□ -1.08
LSM6-204ENST00000504181 OR5AP2Q8NGF4 316 aa8.28□□□□□ -1.08
LSM6-204ENST00000504181 NPIPB3Q92617 1050 aa8.28□□□□□ -1.08
LSM6-204ENST00000504181 ACY3Q96HD9 319 aa8.28□□□□□ -1.08
LSM6-204ENST00000504181 ZNF2Q9BSG1 426 aaPredicted RBP8.28□□□□□ -1.08
LSM6-204ENST00000504181 PDCD10Q9BUL8 212 aa8.28□□□□□ -1.08
LSM6-204ENST00000504181 FXYD6Q9H0Q3 95 aa8.28□□□□□ -1.08
LSM6-204ENST00000504181 Q9HAA7 133 aa8.28□□□□□ -1.08
LSM6-204ENST00000504181 EHFQ9NZC4 300 aa8.28□□□□□ -1.08
LSM6-204ENST00000504181 PFDN2Q9UHV9 154 aa8.28□□□□□ -1.08
LSM6-204ENST00000504181 SMIM30A4D0T7 59 aa8.27□□□□□ -1.09
LSM6-204ENST00000504181 GPR31O00270 319 aa8.27□□□□□ -1.09
LSM6-204ENST00000504181 PAX4O43316 350 aa8.27□□□□□ -1.09
LSM6-204ENST00000504181 CIB2O75838 187 aa8.27□□□□□ -1.09
LSM6-204ENST00000504181 SLC25A4P12235 298 aa8.27□□□□□ -1.09
LSM6-204ENST00000504181 CBX5P45973 191 aa8.27□□□□□ -1.09
LSM6-204ENST00000504181 MEOX2P50222 304 aa8.27□□□□□ -1.09
LSM6-204ENST00000504181 GAMTQ14353 236 aa8.27□□□□□ -1.09
LSM6-204ENST00000504181 BSXQ3C1V8 233 aa8.27□□□□□ -1.09
LSM6-204ENST00000504181 OR8G2PQ6IF36 304 aa8.27□□□□□ -1.09
LSM6-204ENST00000504181 OR8I2Q8N0Y5 310 aa8.27□□□□□ -1.09
LSM6-204ENST00000504181 C10orf126Q8N4M7 172 aa8.27□□□□□ -1.09
LSM6-204ENST00000504181 RNF182Q8N6D2 247 aa8.27□□□□□ -1.09
LSM6-204ENST00000504181 PPP1R14BQ96C90 147 aa8.27□□□□□ -1.09
LSM6-204ENST00000504181 PPP1R14DQ9NXH3 145 aa8.27□□□□□ -1.09
LSM6-204ENST00000504181 RCL1Q9Y2P8 373 aaKnown RBP8.27□□□□□ -1.09
LSM6-204ENST00000504181 LPAP08519 4548 aa8.26□□□□□ -1.09
LSM6-204ENST00000504181 TRGV2A0A075B6R0 118 aa8.26□□□□□ -1.09
LSM6-204ENST00000504181 MEIS3P1A6NDR6 274 aa8.26□□□□□ -1.09
LSM6-204ENST00000504181 RAB3BP20337 219 aa8.26□□□□□ -1.09
LSM6-204ENST00000504181 PSMA1P25786 263 aaKnown RBP8.26□□□□□ -1.09
LSM6-204ENST00000504181 HIST1H1AQ02539 215 aaPredicted RBP8.26□□□□□ -1.09
LSM6-204ENST00000504181 C1orf194Q5T5A4 169 aa8.26□□□□□ -1.09
LSM6-204ENST00000504181 SAMD13Q5VXD3 122 aa8.26□□□□□ -1.09
LSM6-204ENST00000504181 TBC1D26Q86UD7 250 aa8.26□□□□□ -1.09
LSM6-204ENST00000504181 CCDC28AQ8IWP9 274 aa8.26□□□□□ -1.09
LSM6-204ENST00000504181 RBPMSQ93062 196 aaKnown RBP8.26□□□□□ -1.09
LSM6-204ENST00000504181 PLCXD1Q9NUJ7 323 aa8.26□□□□□ -1.09
LSM6-204ENST00000504181 FKBP14Q9NWM8 211 aa8.26□□□□□ -1.09
LSM6-204ENST00000504181 RRP15Q9Y3B9 282 aaKnown RBP8.26□□□□□ -1.09
LSM6-204ENST00000504181 TRAV5A0A0B4J249 113 aa8.25□□□□□ -1.09
LSM6-204ENST00000504181 H7BYZ3 331 aa8.25□□□□□ -1.09
LSM6-204ENST00000504181 ZNF324O75467 553 aaPredicted RBP8.25□□□□□ -1.09
LSM6-204ENST00000504181 SCGNO76038 276 aa8.25□□□□□ -1.09
LSM6-204ENST00000504181 RFX2P48378 723 aa8.25□□□□□ -1.09
LSM6-204ENST00000504181 LYZP61626 148 aa8.25□□□□□ -1.09
LSM6-204ENST00000504181 IDNKQ5T6J7 187 aa8.25□□□□□ -1.09
LSM6-204ENST00000504181 SLC24A4Q8NFF2 622 aa8.25□□□□□ -1.09
LSM6-204ENST00000504181 LECT2O14960 151 aa8.24□□□□□ -1.09
LSM6-204ENST00000504181 IGKV1-5P01602 117 aa8.24□□□□□ -1.09
LSM6-204ENST00000504181 HTR2BP41595 481 aa8.24□□□□□ -1.09
LSM6-204ENST00000504181 TAS2R20P59543 309 aa8.24□□□□□ -1.09
LSM6-204ENST00000504181 ACOT6Q3I5F7 207 aaPredicted RBP8.24□□□□□ -1.09
LSM6-204ENST00000504181 NEGR1Q7Z3B1 354 aa8.24□□□□□ -1.09
LSM6-204ENST00000504181 ZNF738Q8NE65 137 aa8.24□□□□□ -1.09
LSM6-204ENST00000504181 RSG1Q9BU20 258 aa8.24□□□□□ -1.09
LSM6-204ENST00000504181 SLC25A32Q9H2D1 315 aa8.24□□□□□ -1.09
LSM6-204ENST00000504181 TRAV18A0A075B6X5 111 aa8.23□□□□□ -1.09
LSM6-204ENST00000504181 TRAV1-2A0A0B4J238 106 aa8.23□□□□□ -1.09
LSM6-204ENST00000504181 OR5AC1P0C628 307 aa8.23□□□□□ -1.09
LSM6-204ENST00000504181 MYL9P24844 172 aa8.23□□□□□ -1.09
LSM6-204ENST00000504181 CDKN1BP46527 198 aa8.23□□□□□ -1.09
LSM6-204ENST00000504181 GALR1P47211 349 aa8.23□□□□□ -1.09
LSM6-204ENST00000504181 AKR1C2P52895 323 aa8.23□□□□□ -1.09
LSM6-204ENST00000504181 MRPL23Q16540 153 aaKnown RBP8.23□□□□□ -1.09
LSM6-204ENST00000504181 ZFP1Q6P2D0 407 aa8.23□□□□□ -1.09
LSM6-204ENST00000504181 DHRS11Q6UWP2 260 aa8.23□□□□□ -1.09
LSM6-204ENST00000504181 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.23□□□□□ -1.09
LSM6-204ENST00000504181 Q6ZRU5 148 aa8.23□□□□□ -1.09
LSM6-204ENST00000504181 OR52E5Q8NH55 327 aa8.23□□□□□ -1.09
LSM6-204ENST00000504181 RNASEH2CQ8TDP1 164 aaKnown RBP8.23□□□□□ -1.09
LSM6-204ENST00000504181 IL22RA2Q969J5 263 aa8.23□□□□□ -1.09
LSM6-204ENST00000504181 SLC25A22Q9H936 323 aa8.23□□□□□ -1.09
LSM6-204ENST00000504181 MUC2Q02817 5179 aa8.22□□□□□ -1.09
LSM6-204ENST00000504181 TRAV8-2A0A0B4J237 113 aa8.22□□□□□ -1.09
LSM6-204ENST00000504181 PTGES3LE9PB15 166 aa8.22□□□□□ -1.09
LSM6-204ENST00000504181 PRAF2O60831 178 aa8.22□□□□□ -1.09
LSM6-204ENST00000504181 CCNKO75909 580 aa8.22□□□□□ -1.09
LSM6-204ENST00000504181 IGLV2-11P01706 119 aa8.22□□□□□ -1.09
LSM6-204ENST00000504181 IGHV3-53P01767 116 aa8.22□□□□□ -1.09
LSM6-204ENST00000504181 PMP2P02689 132 aa8.22□□□□□ -1.09
LSM6-204ENST00000504181 GNAO1P09471 354 aa8.22□□□□□ -1.09
LSM6-204ENST00000504181 ZNF90Q03938 601 aa8.22□□□□□ -1.09
LSM6-204ENST00000504181 ASAH1Q13510 395 aa8.22□□□□□ -1.09
LSM6-204ENST00000504181 ETFRF1Q6IPR1 90 aa8.22□□□□□ -1.09
LSM6-204ENST00000504181 ARRDC1Q8N5I2 433 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms