RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 PAQR4Q8N4S7 273 aaPredicted RBP3.93□□□□□ -1.78
NEAT1-202ENST00000501122 Q96M66 194 aa3.93□□□□□ -1.78
NEAT1-202ENST00000501122 IFI27L2Q9H2X8 130 aa3.93□□□□□ -1.78
NEAT1-202ENST00000501122 KNDC1Q76NI1 1749 aa3.93□□□□□ -1.78
NEAT1-202ENST00000501122 GFRA4Q9GZZ7 299 aa3.93□□□□□ -1.78
NEAT1-202ENST00000501122 FUSP35637 526 aaKnown RBP eCLIP3.93□□□□□ -1.782e-22■■■□□ 15.3
NEAT1-202ENST00000501122 NEU4Q8WWR8 484 aaPredicted RBP3.93□□□□□ -1.78
NEAT1-202ENST00000501122 GFERP55789 205 aa3.93□□□□□ -1.78
NEAT1-202ENST00000501122 FKBP1BP68106 108 aa3.93□□□□□ -1.78
NEAT1-202ENST00000501122 FAM90A10PA6NDY2 464 aa3.93□□□□□ -1.78
NEAT1-202ENST00000501122 FAM90A20PA6NIJ5 464 aa3.93□□□□□ -1.78
NEAT1-202ENST00000501122 FAM90A8PA6NJQ4 464 aa3.93□□□□□ -1.78
NEAT1-202ENST00000501122 FAM90A13PP0C7W8 464 aa3.93□□□□□ -1.78
NEAT1-202ENST00000501122 FAM90A24PP0C7X0 464 aa3.93□□□□□ -1.78
NEAT1-202ENST00000501122 SMRP1Q8NCR6 262 aa3.93□□□□□ -1.78
NEAT1-202ENST00000501122 Q9H3A6 140 aa3.93□□□□□ -1.78
NEAT1-202ENST00000501122 TMEM202A6NGA9 273 aa3.93□□□□□ -1.78
NEAT1-202ENST00000501122 FAM201AQ5SY85 155 aa3.93□□□□□ -1.78
NEAT1-202ENST00000501122 IGHV3-64A0A075B6Q5 118 aa3.93□□□□□ -1.78
NEAT1-202ENST00000501122 SS18L1O75177 396 aaPredicted RBP3.93□□□□□ -1.78
NEAT1-202ENST00000501122 C20orf197Q8N268 126 aa3.93□□□□□ -1.78
NEAT1-202ENST00000501122 SUPT4H1P63272 117 aaKnown RBP3.92□□□□□ -1.78
NEAT1-202ENST00000501122 IGHV3-15A0A0B4J1V0 119 aa3.92□□□□□ -1.78
NEAT1-202ENST00000501122 KLF16Q9BXK1 252 aaPredicted RBP3.92□□□□□ -1.78
NEAT1-202ENST00000501122 NAV2Q8IVL1 2488 aa3.92□□□□□ -1.78
NEAT1-202ENST00000501122 LIME1Q9H400 295 aa3.92□□□□□ -1.78
NEAT1-202ENST00000501122 ZNFX1Q9P2E3 1918 aaKnown RBP3.92□□□□□ -1.78
NEAT1-202ENST00000501122 IGHV5-51A0A0C4DH38 117 aa3.92□□□□□ -1.78
NEAT1-202ENST00000501122 NBL1P41271 181 aa3.92□□□□□ -1.78
NEAT1-202ENST00000501122 Q6ZS92 163 aa3.92□□□□□ -1.78
NEAT1-202ENST00000501122 C1orf167Q5SNV9 1468 aa3.92□□□□□ -1.78
NEAT1-202ENST00000501122 M0R381 172 aa3.92□□□□□ -1.78
NEAT1-202ENST00000501122 C8orf46Q8TAG6 207 aa3.92□□□□□ -1.78
NEAT1-202ENST00000501122 IGKV3-7A0A075B6H7 116 aa3.92□□□□□ -1.78
NEAT1-202ENST00000501122 CLPSL1A2RUU4 121 aa3.92□□□□□ -1.78
NEAT1-202ENST00000501122 MEGF6O75095 1541 aa3.92□□□□□ -1.78
NEAT1-202ENST00000501122 TRBV5-4A0A0C4DH59 114 aa3.92□□□□□ -1.78
NEAT1-202ENST00000501122 OOSP1A8MZH6 123 aa3.92□□□□□ -1.78
NEAT1-202ENST00000501122 PATE4P0C8F1 98 aa3.92□□□□□ -1.78
NEAT1-202ENST00000501122 WDR83OSQ9Y284 106 aa3.92□□□□□ -1.78
NEAT1-202ENST00000501122 V9GYV3 84 aa3.92□□□□□ -1.78
NEAT1-202ENST00000501122 CRYGSP22914 178 aa3.92□□□□□ -1.78
NEAT1-202ENST00000501122 PMS2CLQ68D20 193 aa3.92□□□□□ -1.78
NEAT1-202ENST00000501122 NCKAP5O14513 1909 aa3.92□□□□□ -1.78
NEAT1-202ENST00000501122 XGP55808 180 aa3.92□□□□□ -1.78
NEAT1-202ENST00000501122 LINC01620Q4KN68 170 aa3.92□□□□□ -1.78
NEAT1-202ENST00000501122 C8orf44Q96CB5 159 aa3.92□□□□□ -1.78
NEAT1-202ENST00000501122 AGPAT4-IT1Q9H0P7 198 aa3.92□□□□□ -1.78
NEAT1-202ENST00000501122 EML6Q6ZMW3 1958 aa3.92□□□□□ -1.78
NEAT1-202ENST00000501122 IGLV3-10A0A075B6K4 115 aa3.92□□□□□ -1.78
NEAT1-202ENST00000501122 IL15RAQ13261 267 aa3.92□□□□□ -1.78
NEAT1-202ENST00000501122 LINC00526Q96FQ7 95 aa3.92□□□□□ -1.78
NEAT1-202ENST00000501122 C4orf26Q17RF5 130 aa3.92□□□□□ -1.78
NEAT1-202ENST00000501122 SLIT1O75093 1534 aa3.92□□□□□ -1.78
NEAT1-202ENST00000501122 CHKB-CPT1BH3BT56 60 aa3.92□□□□□ -1.78
NEAT1-202ENST00000501122 SLC25A29Q8N8R3 303 aa3.92□□□□□ -1.78
NEAT1-202ENST00000501122 NCOA6Q14686 2063 aaPredicted RBP3.92□□□□□ -1.78
NEAT1-202ENST00000501122 MYO9AB2RTY4 2548 aa3.92□□□□□ -1.78
NEAT1-202ENST00000501122 VEGFBP49765 207 aa3.92□□□□□ -1.78
NEAT1-202ENST00000501122 TRBV12-3P01733 135 aa3.91□□□□□ -1.78
NEAT1-202ENST00000501122 GLI2P10070 1586 aa3.91□□□□□ -1.78
NEAT1-202ENST00000501122 NEXMIFQ5QGS0 1516 aa3.91□□□□□ -1.78
NEAT1-202ENST00000501122 IGHV3-48P01763 117 aa3.91□□□□□ -1.78
NEAT1-202ENST00000501122 MROH1Q8NDA8 1641 aa3.91□□□□□ -1.78
NEAT1-202ENST00000501122 DXOO77932 396 aaKnown RBP3.91□□□□□ -1.78
NEAT1-202ENST00000501122 ZNF32P17041 273 aa3.91□□□□□ -1.78
NEAT1-202ENST00000501122 CACNA1AO00555 2505 aa3.91□□□□□ -1.78
NEAT1-202ENST00000501122 CCL21O00585 134 aa3.91□□□□□ -1.78
NEAT1-202ENST00000501122 ZNF501Q96CX3 271 aaPredicted RBP3.91□□□□□ -1.78
NEAT1-202ENST00000501122 LYZL1Q6UWQ5 148 aa3.91□□□□□ -1.78
NEAT1-202ENST00000501122 TM2D2Q9BX73 214 aa3.91□□□□□ -1.78
NEAT1-202ENST00000501122 C4orf48Q5BLP8 95 aa3.91□□□□□ -1.78
NEAT1-202ENST00000501122 ZPLD1Q8TCW7 415 aa3.91□□□□□ -1.78
NEAT1-202ENST00000501122 KIAA0556O60303 1618 aa3.91□□□□□ -1.78
NEAT1-202ENST00000501122 RHOHQ15669 191 aa3.91□□□□□ -1.78
NEAT1-202ENST00000501122 ERCC6L2Q5T890 1561 aa3.91□□□□□ -1.78
NEAT1-202ENST00000501122 HOXB2P14652 356 aa3.91□□□□□ -1.78
NEAT1-202ENST00000501122 TTC37Q6PGP7 1564 aa3.91□□□□□ -1.78
NEAT1-202ENST00000501122 C3orf36Q3SXR2 165 aa3.91□□□□□ -1.78
NEAT1-202ENST00000501122 ARTNQ5T4W7 220 aa3.91□□□□□ -1.78
NEAT1-202ENST00000501122 CXXC4Q9H2H0 198 aa3.91□□□□□ -1.78
NEAT1-202ENST00000501122 SLIT2O94813 1529 aa3.91□□□□□ -1.78
NEAT1-202ENST00000501122 TEX49A0A1B0GTD5 131 aa3.91□□□□□ -1.78
NEAT1-202ENST00000501122 RPL27AP46776 148 aaKnown RBP3.91□□□□□ -1.78
NEAT1-202ENST00000501122 HS3ST6Q96QI5 342 aa3.91□□□□□ -1.78
NEAT1-202ENST00000501122 CLTCL1P53675 1640 aa3.91□□□□□ -1.78
NEAT1-202ENST00000501122 DNMT1P26358 1616 aaKnown RBP3.91□□□□□ -1.78
NEAT1-202ENST00000501122 GATA3P23771 443 aa3.9□□□□□ -1.78
NEAT1-202ENST00000501122 HCP5Q6MZN7 132 aa3.9□□□□□ -1.78
NEAT1-202ENST00000501122 WIPF2Q8TF74 440 aaPredicted RBP3.9□□□□□ -1.78
NEAT1-202ENST00000501122 TOMM7Q9P0U1 55 aa3.9□□□□□ -1.78
NEAT1-202ENST00000501122 ACANP16112 2415 aa3.9□□□□□ -1.78
NEAT1-202ENST00000501122 THADAQ6YHU6 1953 aa3.9□□□□□ -1.78
NEAT1-202ENST00000501122 RPL34P49207 117 aaKnown RBP3.9□□□□□ -1.78
NEAT1-202ENST00000501122 REPIN1Q9BWE0 567 aaKnown RBP3.9□□□□□ -1.78
NEAT1-202ENST00000501122 HIVEP2P31629 2446 aa3.9□□□□□ -1.78
NEAT1-202ENST00000501122 J3QT63 122 aa3.9□□□□□ -1.78
NEAT1-202ENST00000501122 METTL26Q96S19 204 aa3.9□□□□□ -1.78
NEAT1-202ENST00000501122 PCDH15Q96QU1 1955 aa3.9□□□□□ -1.78
NEAT1-202ENST00000501122 TRAV13-2A0A0B4J235 113 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms