RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 RNASE1P07998 156 aaKnown RBP6.58□□□□□ -1.36
SF3A1-210ENST00000498259 SRP19P09132 144 aaKnown RBP6.58□□□□□ -1.36
SF3A1-210ENST00000498259 HIST1H1EP10412 219 aaKnown RBP6.58□□□□□ -1.36
SF3A1-210ENST00000498259 PSMB8P28062 276 aa6.58□□□□□ -1.36
SF3A1-210ENST00000498259 CEBPGP53567 150 aa6.58□□□□□ -1.36
SF3A1-210ENST00000498259 CFHR3Q02985 330 aa6.58□□□□□ -1.36
SF3A1-210ENST00000498259 KRTAP1-1Q07627 177 aa6.58□□□□□ -1.36
SF3A1-210ENST00000498259 ZNF343Q6P1L6 599 aa6.58□□□□□ -1.36
SF3A1-210ENST00000498259 SSX7Q7RTT5 188 aa6.58□□□□□ -1.36
SF3A1-210ENST00000498259 LYPD1Q8N2G4 141 aa6.58□□□□□ -1.36
SF3A1-210ENST00000498259 OR4X2Q8NGF9 303 aa6.58□□□□□ -1.36
SF3A1-210ENST00000498259 UBE2E2Q96LR5 201 aa6.58□□□□□ -1.36
SF3A1-210ENST00000498259 NOL4LQ96MY1 436 aaPredicted RBP6.58□□□□□ -1.36
SF3A1-210ENST00000498259 LINC00052Q96N35 136 aa6.58□□□□□ -1.36
SF3A1-210ENST00000498259 SHANK2-AS3Q9BTD1 123 aa6.58□□□□□ -1.36
SF3A1-210ENST00000498259 PEF1Q9UBV8 284 aaKnown RBP6.58□□□□□ -1.36
SF3A1-210ENST00000498259 LINC00527Q9UJ94 153 aa6.58□□□□□ -1.36
SF3A1-210ENST00000498259 PUS1Q9Y606 427 aaKnown RBP eCLIP6.58□□□□□ -1.36
SF3A1-210ENST00000498259 MAP1AP78559 2803 aaPredicted RBP6.58□□□□□ -1.36
SF3A1-210ENST00000498259 ABCA1O95477 2261 aa6.57□□□□□ -1.36
SF3A1-210ENST00000498259 ZNF98A6NK75 572 aa6.57□□□□□ -1.36
SF3A1-210ENST00000498259 ZNF727A8MUV8 499 aa6.57□□□□□ -1.36
SF3A1-210ENST00000498259 K7EQM0 130 aa6.57□□□□□ -1.36
SF3A1-210ENST00000498259 NBEAP1P0C6P0 100 aa6.57□□□□□ -1.36
SF3A1-210ENST00000498259 GALR1P47211 349 aa6.57□□□□□ -1.36
SF3A1-210ENST00000498259 HILS1P60008 231 aa6.57□□□□□ -1.36
SF3A1-210ENST00000498259 UBE2G2P60604 165 aa6.57□□□□□ -1.36
SF3A1-210ENST00000498259 SRSF3P84103 164 aaKnown RBP6.57□□□□□ -1.36
SF3A1-210ENST00000498259 PSG9Q00887 426 aa6.57□□□□□ -1.36
SF3A1-210ENST00000498259 PDE6HQ13956 83 aa6.57□□□□□ -1.36
SF3A1-210ENST00000498259 RHEBQ15382 184 aa6.57□□□□□ -1.36
SF3A1-210ENST00000498259 SAMD13Q5VXD3 122 aa6.57□□□□□ -1.36
SF3A1-210ENST00000498259 PATE2Q6UY27 113 aa6.57□□□□□ -1.36
SF3A1-210ENST00000498259 IL17RELQ6ZVW7 336 aa6.57□□□□□ -1.36
SF3A1-210ENST00000498259 OR8I2Q8N0Y5 310 aa6.57□□□□□ -1.36
SF3A1-210ENST00000498259 CYB561D1Q8N8Q1 229 aa6.57□□□□□ -1.36
SF3A1-210ENST00000498259 CMTM2Q8TAZ6 248 aa6.57□□□□□ -1.36
SF3A1-210ENST00000498259 HIST1H2BAQ96A08 127 aa6.57□□□□□ -1.36
SF3A1-210ENST00000498259 TVP23CQ96ET8 276 aa6.57□□□□□ -1.36
SF3A1-210ENST00000498259 ELOVL1Q9BW60 279 aa6.57□□□□□ -1.36
SF3A1-210ENST00000498259 SCRT1Q9BWW7 348 aa6.57□□□□□ -1.36
SF3A1-210ENST00000498259 SLC25A2Q9BXI2 301 aa6.57□□□□□ -1.36
SF3A1-210ENST00000498259 TMPRSS5Q9H3S3 457 aa6.57□□□□□ -1.36
SF3A1-210ENST00000498259 GSX1Q9H4S2 264 aaPredicted RBP6.57□□□□□ -1.36
SF3A1-210ENST00000498259 AAMDCQ9H7C9 122 aa6.57□□□□□ -1.36
SF3A1-210ENST00000498259 ZNF702PQ9H963 129 aa6.57□□□□□ -1.36
SF3A1-210ENST00000498259 CLEC5AQ9NY25 188 aa6.57□□□□□ -1.36
SF3A1-210ENST00000498259 FAM181BA6NEQ2 426 aa6.56□□□□□ -1.36
SF3A1-210ENST00000498259 FAM74A7A6NL05 159 aa6.56□□□□□ -1.36
SF3A1-210ENST00000498259 F8W735 103 aaPredicted RBP6.56□□□□□ -1.36
SF3A1-210ENST00000498259 H3BRN7 92 aa6.56□□□□□ -1.36
SF3A1-210ENST00000498259 M0R036 132 aa6.56□□□□□ -1.36
SF3A1-210ENST00000498259 LY6G6DO95868 133 aa6.56□□□□□ -1.36
SF3A1-210ENST00000498259 IGHV3-23P01764 117 aa6.56□□□□□ -1.36
SF3A1-210ENST00000498259 OR10J4P0C629 311 aa6.56□□□□□ -1.36
SF3A1-210ENST00000498259 CSN1S1P47710 185 aa6.56□□□□□ -1.36
SF3A1-210ENST00000498259 CD81P60033 236 aa6.56□□□□□ -1.36
SF3A1-210ENST00000498259 TMEM241Q24JQ0 296 aa6.56□□□□□ -1.36
SF3A1-210ENST00000498259 TOMM20LQ6UXN7 152 aa6.56□□□□□ -1.36
SF3A1-210ENST00000498259 ARL6IP6Q8N6S5 226 aa6.56□□□□□ -1.36
SF3A1-210ENST00000498259 RNF152Q8N8N0 203 aa6.56□□□□□ -1.36
SF3A1-210ENST00000498259 FAM167A-AS1Q96KT0 104 aa6.56□□□□□ -1.36
SF3A1-210ENST00000498259 CCDC140Q96MF4 163 aa6.56□□□□□ -1.36
SF3A1-210ENST00000498259 SMIM7Q9BQ49 75 aa6.56□□□□□ -1.36
SF3A1-210ENST00000498259 NAT8Q9UHE5 227 aa6.56□□□□□ -1.36
SF3A1-210ENST00000498259 UFC1Q9Y3C8 167 aa6.56□□□□□ -1.36
SF3A1-210ENST00000498259 S4R3C0 116 aa6.56□□□□□ -1.36
SF3A1-210ENST00000498259 PLXNB1O43157 2135 aa6.56□□□□□ -1.36
SF3A1-210ENST00000498259 PDZD2O15018 2839 aa6.55□□□□□ -1.36
SF3A1-210ENST00000498259 SERTM2A0A1B0GWG4 89 aa6.55□□□□□ -1.36
SF3A1-210ENST00000498259 FBLL1A6NHQ2 334 aaKnown RBP6.55□□□□□ -1.36
SF3A1-210ENST00000498259 K7EMT4 169 aa6.55□□□□□ -1.36
SF3A1-210ENST00000498259 TCF21O43680 179 aa6.55□□□□□ -1.36
SF3A1-210ENST00000498259 ZNF253O75346 499 aa6.55□□□□□ -1.36
SF3A1-210ENST00000498259 ATF4P18848 351 aaPredicted RBP6.55□□□□□ -1.36
SF3A1-210ENST00000498259 ADMP35318 185 aa6.55□□□□□ -1.36
SF3A1-210ENST00000498259 CDX1P47902 265 aaPredicted RBP6.55□□□□□ -1.36
SF3A1-210ENST00000498259 SUMO1P63165 101 aaKnown RBP6.55□□□□□ -1.36
SF3A1-210ENST00000498259 SPATA31B1PQ5VZV4 182 aa6.55□□□□□ -1.36
SF3A1-210ENST00000498259 ZNF329Q86UD4 541 aa6.55□□□□□ -1.36
SF3A1-210ENST00000498259 GPHB5Q86YW7 130 aa6.55□□□□□ -1.36
SF3A1-210ENST00000498259 KLHDC1Q8N7A1 406 aa6.55□□□□□ -1.36
SF3A1-210ENST00000498259 FXYD5Q96DB9 178 aa6.55□□□□□ -1.36
SF3A1-210ENST00000498259 CHRDL1Q9BU40 450 aa6.55□□□□□ -1.36
SF3A1-210ENST00000498259 C20orf24Q9BUV8 137 aa6.55□□□□□ -1.36
SF3A1-210ENST00000498259 C16orf95Q9H693 158 aa6.55□□□□□ -1.36
SF3A1-210ENST00000498259 BIN3Q9NQY0 253 aa6.55□□□□□ -1.36
SF3A1-210ENST00000498259 NAV3Q8IVL0 2385 aa6.55□□□□□ -1.36
SF3A1-210ENST00000498259 TRAV5A0A0B4J249 113 aa6.54□□□□□ -1.36
SF3A1-210ENST00000498259 A0A1B0GUS0 222 aa6.54□□□□□ -1.36
SF3A1-210ENST00000498259 ZNF320A2RRD8 509 aa6.54□□□□□ -1.36
SF3A1-210ENST00000498259 HELTA6NFD8 242 aa6.54□□□□□ -1.36
SF3A1-210ENST00000498259 H3BQ15 152 aa6.54□□□□□ -1.36
SF3A1-210ENST00000498259 M0QZ24 198 aa6.54□□□□□ -1.36
SF3A1-210ENST00000498259 MT-ND4LP03901 98 aa6.54□□□□□ -1.36
SF3A1-210ENST00000498259 LGALS1P09382 135 aaKnown RBP6.54□□□□□ -1.36
SF3A1-210ENST00000498259 GP9P14770 177 aa6.54□□□□□ -1.36
SF3A1-210ENST00000498259 CRYBB3P26998 211 aa6.54□□□□□ -1.36
SF3A1-210ENST00000498259 CNN1P51911 297 aaKnown RBP6.54□□□□□ -1.36
SF3A1-210ENST00000498259 TAS2R60P59551 318 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms