RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 OR10J5Q8NHC4 309 aa4.39□□□□□ -1.71
TMEM39A-212ENST00000497993 C4orf3Q8WVX3 66 aa4.39□□□□□ -1.71
TMEM39A-212ENST00000497993 CHCHD10Q8WYQ3 142 aaPredicted RBP4.39□□□□□ -1.71
TMEM39A-212ENST00000497993 UBE2E2Q96LR5 201 aa4.39□□□□□ -1.71
TMEM39A-212ENST00000497993 NOL4LQ96MY1 436 aaPredicted RBP4.39□□□□□ -1.71
TMEM39A-212ENST00000497993 RASL11BQ9BPW5 248 aa4.39□□□□□ -1.71
TMEM39A-212ENST00000497993 RNF126Q9BV68 326 aa4.39□□□□□ -1.71
TMEM39A-212ENST00000497993 VSIG4Q9Y279 399 aa4.39□□□□□ -1.71
TMEM39A-212ENST00000497993 NUBP2Q9Y5Y2 271 aa4.39□□□□□ -1.71
TMEM39A-212ENST00000497993 IGLV4-3A0A075B6K6 122 aa4.38□□□□□ -1.71
TMEM39A-212ENST00000497993 IGHV3OR16-13A0A075B7E8 117 aa4.38□□□□□ -1.71
TMEM39A-212ENST00000497993 A0A0G2JRQ6 117 aa4.38□□□□□ -1.71
TMEM39A-212ENST00000497993 TCRBV4S1A1TA0A5B7 111 aa4.38□□□□□ -1.71
TMEM39A-212ENST00000497993 TMEM235A6NFC5 223 aa4.38□□□□□ -1.71
TMEM39A-212ENST00000497993 I3L521 148 aa4.38□□□□□ -1.71
TMEM39A-212ENST00000497993 RBFOX2O43251 390 aaKnown RBP eCLIP4.38□□□□□ -1.71
TMEM39A-212ENST00000497993 RAB3DO95716 219 aa4.38□□□□□ -1.71
TMEM39A-212ENST00000497993 PTTG1O95997 202 aa4.38□□□□□ -1.71
TMEM39A-212ENST00000497993 APOA2P02652 100 aa4.38□□□□□ -1.71
TMEM39A-212ENST00000497993 RLN2P04090 185 aa4.38□□□□□ -1.71
TMEM39A-212ENST00000497993 IGKV1-16P04430 117 aa4.38□□□□□ -1.71
TMEM39A-212ENST00000497993 F2RP25116 425 aa4.38□□□□□ -1.71
TMEM39A-212ENST00000497993 PFN2P35080 140 aa4.38□□□□□ -1.71
TMEM39A-212ENST00000497993 TGFBR1P36897 503 aa4.38□□□□□ -1.71
TMEM39A-212ENST00000497993 CEACAM6P40199 344 aa4.38□□□□□ -1.71
TMEM39A-212ENST00000497993 CBX5P45973 191 aa4.38□□□□□ -1.71
TMEM39A-212ENST00000497993 NUTF2P61970 127 aaKnown RBP4.38□□□□□ -1.71
TMEM39A-212ENST00000497993 CDNFQ49AH0 187 aa4.38□□□□□ -1.71
TMEM39A-212ENST00000497993 UBE2NLQ5JXB2 153 aa4.38□□□□□ -1.71
TMEM39A-212ENST00000497993 ZNF695Q8IW36 515 aa4.38□□□□□ -1.71
TMEM39A-212ENST00000497993 ZNF645Q8N7E2 425 aa4.38□□□□□ -1.71
TMEM39A-212ENST00000497993 ZFAND1Q8TCF1 268 aa4.38□□□□□ -1.71
TMEM39A-212ENST00000497993 ABHD14BQ96IU4 210 aa4.38□□□□□ -1.71
TMEM39A-212ENST00000497993 C20orf85Q9H1P6 137 aa4.38□□□□□ -1.71
TMEM39A-212ENST00000497993 OR2D2Q9H210 308 aa4.38□□□□□ -1.71
TMEM39A-212ENST00000497993 ANXA10Q9UJ72 324 aa4.38□□□□□ -1.71
TMEM39A-212ENST00000497993 IGKV1D-13A0A0B4J2D9 117 aa4.37□□□□□ -1.71
TMEM39A-212ENST00000497993 AGPAT2O15120 278 aa4.37□□□□□ -1.71
TMEM39A-212ENST00000497993 TGOLN2O43493 480 aa4.37□□□□□ -1.71
TMEM39A-212ENST00000497993 C8orf88P0DMB2 117 aa4.37□□□□□ -1.71
TMEM39A-212ENST00000497993 IGKV1-13P0DP09 117 aa4.37□□□□□ -1.71
TMEM39A-212ENST00000497993 IGLL1P15814 213 aa4.37□□□□□ -1.71
TMEM39A-212ENST00000497993 CNTFRP26992 372 aa4.37□□□□□ -1.71
TMEM39A-212ENST00000497993 ARPC4P59998 168 aa4.37□□□□□ -1.71
TMEM39A-212ENST00000497993 NCS1P62166 190 aa4.37□□□□□ -1.71
TMEM39A-212ENST00000497993 DEFA6Q01524 100 aa4.37□□□□□ -1.71
TMEM39A-212ENST00000497993 MXD1Q05195 221 aa4.37□□□□□ -1.71
TMEM39A-212ENST00000497993 ARFRP1Q13795 201 aa4.37□□□□□ -1.71
TMEM39A-212ENST00000497993 IZUMO4Q1ZYL8 232 aa4.37□□□□□ -1.71
TMEM39A-212ENST00000497993 TMUB2Q71RG4 321 aa4.37□□□□□ -1.71
TMEM39A-212ENST00000497993 ARRDC1Q8N5I2 433 aa4.37□□□□□ -1.71
TMEM39A-212ENST00000497993 OR51G1Q8NGK1 321 aa4.37□□□□□ -1.71
TMEM39A-212ENST00000497993 ACOT12Q8WYK0 555 aa4.37□□□□□ -1.71
TMEM39A-212ENST00000497993 HSD17B10Q99714 261 aaKnown RBP4.37□□□□□ -1.71
TMEM39A-212ENST00000497993 ARL6Q9H0F7 186 aa4.37□□□□□ -1.71
TMEM39A-212ENST00000497993 ATG5Q9H1Y0 275 aa4.37□□□□□ -1.71
TMEM39A-212ENST00000497993 ZNF230Q9UIE0 474 aaPredicted RBP4.37□□□□□ -1.71
TMEM39A-212ENST00000497993 TRAV9-2A0A087WT02 112 aa4.36□□□□□ -1.71
TMEM39A-212ENST00000497993 TRAV41A0A0B4J266 112 aa4.36□□□□□ -1.71
TMEM39A-212ENST00000497993 FAM240AA0A1B0GVK7 77 aa4.36□□□□□ -1.71
TMEM39A-212ENST00000497993 M0R1X1 148 aa4.36□□□□□ -1.71
TMEM39A-212ENST00000497993 BET1O15155 118 aa4.36□□□□□ -1.71
TMEM39A-212ENST00000497993 CREBL2O60519 120 aaPredicted RBP4.36□□□□□ -1.71
TMEM39A-212ENST00000497993 TALDO1P37837 337 aa4.36□□□□□ -1.71
TMEM39A-212ENST00000497993 INSL3P51460 131 aa4.36□□□□□ -1.71
TMEM39A-212ENST00000497993 GNG2P59768 71 aa4.36□□□□□ -1.71
TMEM39A-212ENST00000497993 TMEM267Q0VDI3 215 aaPredicted RBP4.36□□□□□ -1.71
TMEM39A-212ENST00000497993 RTL8BQ17RB0 113 aa4.36□□□□□ -1.71
TMEM39A-212ENST00000497993 SPSB3Q6PJ21 355 aa4.36□□□□□ -1.71
TMEM39A-212ENST00000497993 ZNF329Q86UD4 541 aa4.36□□□□□ -1.71
TMEM39A-212ENST00000497993 OR51S1Q8NGJ8 323 aa4.36□□□□□ -1.71
TMEM39A-212ENST00000497993 VN1R17PQ8TDU5 208 aa4.36□□□□□ -1.71
TMEM39A-212ENST00000497993 BORCS5Q969J3 196 aa4.36□□□□□ -1.71
TMEM39A-212ENST00000497993 SOSTQ9BQB4 213 aa4.36□□□□□ -1.71
TMEM39A-212ENST00000497993 GINS4Q9BRT9 223 aa4.36□□□□□ -1.71
TMEM39A-212ENST00000497993 FBXL15Q9H469 300 aa4.36□□□□□ -1.71
TMEM39A-212ENST00000497993 DIABLOQ9NR28 239 aa4.36□□□□□ -1.71
TMEM39A-212ENST00000497993 SLC2A9Q9NRM0 540 aa4.36□□□□□ -1.71
TMEM39A-212ENST00000497993 IGHV1OR15-1A0A075B7D0 117 aa4.35□□□□□ -1.71
TMEM39A-212ENST00000497993 PMS2P5A8MQ11 134 aa4.35□□□□□ -1.71
TMEM39A-212ENST00000497993 F5H768 121 aa4.35□□□□□ -1.71
TMEM39A-212ENST00000497993 G3V318 75 aa4.35□□□□□ -1.71
TMEM39A-212ENST00000497993 UPK1BO75841 260 aa4.35□□□□□ -1.71
TMEM39A-212ENST00000497993 CA2P00918 260 aa4.35□□□□□ -1.71
TMEM39A-212ENST00000497993 PPYP01298 95 aa4.35□□□□□ -1.71
TMEM39A-212ENST00000497993 EIF4EP06730 217 aaKnown RBP4.35□□□□□ -1.71
TMEM39A-212ENST00000497993 LGALS1P09382 135 aaKnown RBP4.35□□□□□ -1.71
TMEM39A-212ENST00000497993 OR8U8P0C7N1 319 aa4.35□□□□□ -1.71
TMEM39A-212ENST00000497993 GALR1P47211 349 aa4.35□□□□□ -1.71
TMEM39A-212ENST00000497993 APOC4P55056 127 aa4.35□□□□□ -1.71
TMEM39A-212ENST00000497993 TMBIM6P55061 237 aa4.35□□□□□ -1.71
TMEM39A-212ENST00000497993 LINC00205P59089 165 aa4.35□□□□□ -1.71
TMEM39A-212ENST00000497993 TAS2R46P59540 309 aa4.35□□□□□ -1.71
TMEM39A-212ENST00000497993 TAS2R20P59543 309 aa4.35□□□□□ -1.71
TMEM39A-212ENST00000497993 RPL30P62888 115 aaKnown RBP4.35□□□□□ -1.71
TMEM39A-212ENST00000497993 SSBP1Q04837 148 aaKnown RBP4.35□□□□□ -1.71
TMEM39A-212ENST00000497993 CDK10Q15131 360 aa4.35□□□□□ -1.71
TMEM39A-212ENST00000497993 ZNF506Q5JVG8 444 aa4.35□□□□□ -1.71
TMEM39A-212ENST00000497993 ADAMTSL4-AS1Q5T5F5 129 aa4.35□□□□□ -1.71
TMEM39A-212ENST00000497993 C18orf65Q6ZTR6 163 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms