RNA–Protein interactions for RNA: ENST00000496882.5

SRRM1-220, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-220ENST00000496882 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.75□□□□□ -1.49
SRRM1-220ENST00000496882 SACSQ9NZJ4 4579 aa5.74□□□□□ -1.49
SRRM1-220ENST00000496882 TENM2Q9NT68 2774 aa5.74□□□□□ -1.49
SRRM1-220ENST00000496882 NAP1L6A6NFF2 107 aa5.74□□□□□ -1.49
SRRM1-220ENST00000496882 KNCNA6PVL3 124 aa5.74□□□□□ -1.49
SRRM1-220ENST00000496882 CENPXA8MT69 81 aa5.74□□□□□ -1.49
SRRM1-220ENST00000496882 SNRPGP15A8MWD9 76 aa5.74□□□□□ -1.49
SRRM1-220ENST00000496882 WRBO00258 174 aa5.74□□□□□ -1.49
SRRM1-220ENST00000496882 SFT2D2O95562 160 aa5.74□□□□□ -1.49
SRRM1-220ENST00000496882 HOXB5P09067 269 aa5.74□□□□□ -1.49
SRRM1-220ENST00000496882 PSG1P11464 419 aa5.74□□□□□ -1.49
SRRM1-220ENST00000496882 SLC25A6P12236 298 aa5.74□□□□□ -1.49
SRRM1-220ENST00000496882 ID1P41134 155 aa5.74□□□□□ -1.49
SRRM1-220ENST00000496882 UBE2MP61081 183 aaKnown RBP5.74□□□□□ -1.49
SRRM1-220ENST00000496882 LYZP61626 148 aa5.74□□□□□ -1.49
SRRM1-220ENST00000496882 USF2Q15853 346 aaPredicted RBP5.74□□□□□ -1.49
SRRM1-220ENST00000496882 OR8G2PQ6IF36 304 aa5.74□□□□□ -1.49
SRRM1-220ENST00000496882 TRPT1Q86TN4 253 aaKnown RBP5.74□□□□□ -1.49
SRRM1-220ENST00000496882 COQ8AQ8NI60 647 aa5.74□□□□□ -1.49
SRRM1-220ENST00000496882 DCANP1Q8TF63 244 aa5.74□□□□□ -1.49
SRRM1-220ENST00000496882 GLMPQ8WWB7 406 aa5.74□□□□□ -1.49
SRRM1-220ENST00000496882 LINC00476Q8WZB0 136 aa5.74□□□□□ -1.49
SRRM1-220ENST00000496882 LYSTQ99698 3801 aa5.74□□□□□ -1.49
SRRM1-220ENST00000496882 NRN1Q9NPD7 142 aa5.74□□□□□ -1.49
SRRM1-220ENST00000496882 V9GYH0 126 aa5.74□□□□□ -1.49
SRRM1-220ENST00000496882 ZNF701M0R085 212 aaPredicted RBP5.73□□□□□ -1.49
SRRM1-220ENST00000496882 BUB3O43684 328 aa5.73□□□□□ -1.49
SRRM1-220ENST00000496882 SYNGR2O43760 224 aa5.73□□□□□ -1.49
SRRM1-220ENST00000496882 CFDP00746 253 aaPredicted RBP5.73□□□□□ -1.49
SRRM1-220ENST00000496882 IFNA21P01568 189 aa5.73□□□□□ -1.49
SRRM1-220ENST00000496882 MED14OSP0DP75 135 aa5.73□□□□□ -1.49
SRRM1-220ENST00000496882 MIFP14174 115 aa5.73□□□□□ -1.49
SRRM1-220ENST00000496882 EWSR1Q01844 656 aaKnown RBP eCLIP5.73□□□□□ -1.49
SRRM1-220ENST00000496882 PPP1R1AQ13522 171 aa5.73□□□□□ -1.49
SRRM1-220ENST00000496882 GAMTQ14353 236 aa5.73□□□□□ -1.49
SRRM1-220ENST00000496882 ZNF79Q15937 498 aa5.73□□□□□ -1.49
SRRM1-220ENST00000496882 SAMD13Q5VXD3 122 aa5.73□□□□□ -1.49
SRRM1-220ENST00000496882 GGNBP1Q5YKI7 109 aa5.73□□□□□ -1.49
SRRM1-220ENST00000496882 CCDC190Q86UF4 302 aa5.73□□□□□ -1.49
SRRM1-220ENST00000496882 LRTM2Q8N967 370 aa5.73□□□□□ -1.49
SRRM1-220ENST00000496882 TMEM170AQ8WVE7 144 aa5.73□□□□□ -1.49
SRRM1-220ENST00000496882 RAB40CQ96S21 281 aa5.73□□□□□ -1.49
SRRM1-220ENST00000496882 SLC25A32Q9H2D1 315 aa5.73□□□□□ -1.49
SRRM1-220ENST00000496882 RYR2Q92736 4967 aa5.73□□□□□ -1.49
SRRM1-220ENST00000496882 ALMS1Q8TCU4 4167 aa5.72□□□□□ -1.49
SRRM1-220ENST00000496882 SMCO3A2RU48 225 aa5.72□□□□□ -1.49
SRRM1-220ENST00000496882 C11orf94C9JXX5 98 aa5.72□□□□□ -1.49
SRRM1-220ENST00000496882 DEFB4AO15263 64 aa5.72□□□□□ -1.49
SRRM1-220ENST00000496882 PITX3O75364 302 aa5.72□□□□□ -1.49
SRRM1-220ENST00000496882 GCSHP23434 173 aa5.72□□□□□ -1.49
SRRM1-220ENST00000496882 NKX2-1P43699 371 aaPredicted RBP5.72□□□□□ -1.49
SRRM1-220ENST00000496882 NANOS2P60321 138 aaKnown RBP5.72□□□□□ -1.49
SRRM1-220ENST00000496882 ZNF90Q03938 601 aa5.72□□□□□ -1.49
SRRM1-220ENST00000496882 AKR1C1Q04828 323 aa5.72□□□□□ -1.49
SRRM1-220ENST00000496882 OR2F1Q13607 317 aa5.72□□□□□ -1.49
SRRM1-220ENST00000496882 SPANXN5Q5MJ07 72 aa5.72□□□□□ -1.49
SRRM1-220ENST00000496882 C1orf194Q5T5A4 169 aa5.72□□□□□ -1.49
SRRM1-220ENST00000496882 S100A7AQ86SG5 101 aa5.72□□□□□ -1.49
SRRM1-220ENST00000496882 OR8I2Q8N0Y5 310 aa5.72□□□□□ -1.49
SRRM1-220ENST00000496882 BPIFCQ8NFQ6 507 aa5.72□□□□□ -1.49
SRRM1-220ENST00000496882 C2CD4CQ8TF44 421 aa5.72□□□□□ -1.49
SRRM1-220ENST00000496882 LINC00052Q96N35 136 aa5.72□□□□□ -1.49
SRRM1-220ENST00000496882 TRGV9Q99603 122 aa5.72□□□□□ -1.49
SRRM1-220ENST00000496882 MAGT1Q9H0U3 335 aa5.72□□□□□ -1.49
SRRM1-220ENST00000496882 TBC1D24Q9ULP9 559 aa5.72□□□□□ -1.49
SRRM1-220ENST00000496882 STRAPQ9Y3F4 350 aaKnown RBP5.72□□□□□ -1.49
SRRM1-220ENST00000496882 CSMD3Q7Z407 3707 aa5.72□□□□□ -1.49
SRRM1-220ENST00000496882 IGHV4-28A0A0C4DH34 117 aa5.71□□□□□ -1.5
SRRM1-220ENST00000496882 LINC00854A0A1B0GVQ3 168 aa5.71□□□□□ -1.5
SRRM1-220ENST00000496882 GALR1P47211 349 aa5.71□□□□□ -1.5
SRRM1-220ENST00000496882 PSMB3P49720 205 aa5.71□□□□□ -1.5
SRRM1-220ENST00000496882 MEOX2P50222 304 aa5.71□□□□□ -1.5
SRRM1-220ENST00000496882 TCTAP57738 103 aa5.71□□□□□ -1.5
SRRM1-220ENST00000496882 CNPY1Q3B7I2 92 aa5.71□□□□□ -1.5
SRRM1-220ENST00000496882 MZT2BQ6NZ67 158 aa5.71□□□□□ -1.5
SRRM1-220ENST00000496882 C7orf50Q9BRJ6 194 aaKnown RBP5.71□□□□□ -1.5
SRRM1-220ENST00000496882 TMEM147Q9BVK8 224 aa5.71□□□□□ -1.5
SRRM1-220ENST00000496882 SRRQ9GZT4 340 aa5.71□□□□□ -1.5
SRRM1-220ENST00000496882 HRH4Q9H3N8 390 aa5.71□□□□□ -1.5
SRRM1-220ENST00000496882 DNAH1Q9P2D7 4330 aa5.7□□□□□ -1.5
SRRM1-220ENST00000496882 C9orf170A2RU37 121 aa5.7□□□□□ -1.5
SRRM1-220ENST00000496882 ZNF705EA8MWA4 302 aaPredicted RBP5.7□□□□□ -1.5
SRRM1-220ENST00000496882 H3BMM0 161 aa5.7□□□□□ -1.5
SRRM1-220ENST00000496882 H3BP45 60 aa5.7□□□□□ -1.5
SRRM1-220ENST00000496882 NDUFB6O95139 128 aa5.7□□□□□ -1.5
SRRM1-220ENST00000496882 OR4E1P0C645 316 aa5.7□□□□□ -1.5
SRRM1-220ENST00000496882 HLA-DRB4P13762 266 aa5.7□□□□□ -1.5
SRRM1-220ENST00000496882 ORM2P19652 201 aa5.7□□□□□ -1.5
SRRM1-220ENST00000496882 C4BPBP20851 252 aa5.7□□□□□ -1.5
SRRM1-220ENST00000496882 SPATA31B1PQ5VZV4 182 aa5.7□□□□□ -1.5
SRRM1-220ENST00000496882 LGALS9CQ6DKI2 356 aa5.7□□□□□ -1.5
SRRM1-220ENST00000496882 EBLN2Q6P2I7 272 aa5.7□□□□□ -1.5
SRRM1-220ENST00000496882 FOXI2Q6ZQN5 318 aa5.7□□□□□ -1.5
SRRM1-220ENST00000496882 THAP8Q8NA92 274 aa5.7□□□□□ -1.5
SRRM1-220ENST00000496882 Q8NAQ8 132 aa5.7□□□□□ -1.5
SRRM1-220ENST00000496882 GPR82Q96P67 336 aa5.7□□□□□ -1.5
SRRM1-220ENST00000496882 RBM38Q9H0Z9 239 aaKnown RBP5.7□□□□□ -1.5
SRRM1-220ENST00000496882 SLC25A22Q9H936 323 aa5.7□□□□□ -1.5
SRRM1-220ENST00000496882 RPRMQ9NS64 109 aa5.7□□□□□ -1.5
SRRM1-220ENST00000496882 CLEC5AQ9NY25 188 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms