RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 XIRP1Q702N8 1843 aaKnown RBP1.86□□□□□ -2.11
CLK1-214ENST00000496205 LCTP09848 1927 aa1.85□□□□□ -2.11
CLK1-214ENST00000496205 PTPRSQ13332 1948 aa1.85□□□□□ -2.11
CLK1-214ENST00000496205 SEC16AO15027 2179 aa1.85□□□□□ -2.11
CLK1-214ENST00000496205 TRPM1Q7Z4N2 1603 aa1.85□□□□□ -2.11
CLK1-214ENST00000496205 HIVEP2P31629 2446 aa1.85□□□□□ -2.11
CLK1-214ENST00000496205 IGHV1-18A0A0C4DH31 117 aa1.85□□□□□ -2.11
CLK1-214ENST00000496205 A0A0J9YX75 114 aa1.85□□□□□ -2.11
CLK1-214ENST00000496205 A0A1W2PNN7 141 aa1.85□□□□□ -2.11
CLK1-214ENST00000496205 A8MWV9 139 aa1.85□□□□□ -2.11
CLK1-214ENST00000496205 C5orf58C9J3I9 102 aa1.85□□□□□ -2.11
CLK1-214ENST00000496205 RHOGP84095 191 aa1.85□□□□□ -2.11
CLK1-214ENST00000496205 FOXF1Q12946 379 aa1.85□□□□□ -2.11
CLK1-214ENST00000496205 LYPD1Q8N2G4 141 aa1.85□□□□□ -2.11
CLK1-214ENST00000496205 OR4S1Q8NGB4 309 aa1.85□□□□□ -2.11
CLK1-214ENST00000496205 OR4E2Q8NGC2 313 aa1.85□□□□□ -2.11
CLK1-214ENST00000496205 PRADC1Q9BSG0 188 aa1.85□□□□□ -2.11
CLK1-214ENST00000496205 MINOS1-NBL1R4GNA1 71 aa1.85□□□□□ -2.11
CLK1-214ENST00000496205 OBSL1O75147 1896 aa1.85□□□□□ -2.11
CLK1-214ENST00000496205 NUP210Q8TEM1 1887 aaPredicted RBP1.85□□□□□ -2.11
CLK1-214ENST00000496205 OVOS2A0A0J9YW53 1432 aa1.84□□□□□ -2.11
CLK1-214ENST00000496205 OVOS2Q6IE36 1432 aa1.84□□□□□ -2.11
CLK1-214ENST00000496205 MYH7BA7E2Y1 1941 aa1.84□□□□□ -2.11
CLK1-214ENST00000496205 OR51F1A6NGY5 319 aa1.84□□□□□ -2.11
CLK1-214ENST00000496205 J3QQQ9 107 aa1.84□□□□□ -2.11
CLK1-214ENST00000496205 C1QCP02747 245 aa1.84□□□□□ -2.11
CLK1-214ENST00000496205 FABP2P12104 132 aa1.84□□□□□ -2.11
CLK1-214ENST00000496205 HRES1P13985 223 aa1.84□□□□□ -2.11
CLK1-214ENST00000496205 TMBIM6P55061 237 aa1.84□□□□□ -2.11
CLK1-214ENST00000496205 SLC38A11Q08AI6 406 aa1.84□□□□□ -2.11
CLK1-214ENST00000496205 DEFB134Q4QY38 66 aa1.84□□□□□ -2.11
CLK1-214ENST00000496205 SPANXN5Q5MJ07 72 aa1.84□□□□□ -2.11
CLK1-214ENST00000496205 FAM27BQ5VT28 67 aa1.84□□□□□ -2.11
CLK1-214ENST00000496205 AAED1Q7RTV5 226 aa1.84□□□□□ -2.11
CLK1-214ENST00000496205 LINC00305Q7Z4B0 112 aa1.84□□□□□ -2.11
CLK1-214ENST00000496205 PDZD9Q8IXQ8 264 aa1.84□□□□□ -2.11
CLK1-214ENST00000496205 SLC30A7Q8NEW0 376 aa1.84□□□□□ -2.11
CLK1-214ENST00000496205 OR51A4Q8NGJ6 313 aa1.84□□□□□ -2.11
CLK1-214ENST00000496205 VPS25Q9BRG1 176 aa1.84□□□□□ -2.11
CLK1-214ENST00000496205 Q9BRP9 147 aa1.84□□□□□ -2.11
CLK1-214ENST00000496205 CACYBPQ9HB71 228 aaKnown RBP1.84□□□□□ -2.11
CLK1-214ENST00000496205 RNF11Q9Y3C5 154 aa1.84□□□□□ -2.11
CLK1-214ENST00000496205 MYH10P35580 1976 aa1.84□□□□□ -2.11
CLK1-214ENST00000496205 SMARCA2P51531 1590 aa1.84□□□□□ -2.12
CLK1-214ENST00000496205 RIMBP3CA6NJZ7 1639 aa1.84□□□□□ -2.12
CLK1-214ENST00000496205 RIMBP3BA6NNM3 1639 aa1.84□□□□□ -2.12
CLK1-214ENST00000496205 CACNA1SQ13698 1873 aa1.84□□□□□ -2.12
CLK1-214ENST00000496205 NUP210LQ5VU65 1888 aa1.84□□□□□ -2.12
CLK1-214ENST00000496205 RTL9Q8NET4 1388 aa1.84□□□□□ -2.12
CLK1-214ENST00000496205 RIMBP3Q9UFD9 1639 aa1.84□□□□□ -2.12
CLK1-214ENST00000496205 ZNF407Q9C0G0 2248 aa1.83□□□□□ -2.12
CLK1-214ENST00000496205 CEP164Q9UPV0 1460 aa1.83□□□□□ -2.12
CLK1-214ENST00000496205 SLX4Q8IY92 1834 aa1.83□□□□□ -2.12
CLK1-214ENST00000496205 TRAV13-1A0A0B4J241 112 aa1.83□□□□□ -2.12
CLK1-214ENST00000496205 LOC107984640A0A0U1RRK4 108 aa1.83□□□□□ -2.12
CLK1-214ENST00000496205 A0A1W2PNM2 257 aa1.83□□□□□ -2.12
CLK1-214ENST00000496205 ODF3BA8MYP8 253 aa1.83□□□□□ -2.12
CLK1-214ENST00000496205 J3QR89 54 aa1.83□□□□□ -2.12
CLK1-214ENST00000496205 M0R2Z0 102 aa1.83□□□□□ -2.12
CLK1-214ENST00000496205 NAPSAO96009 420 aa1.83□□□□□ -2.12
CLK1-214ENST00000496205 S100A1P23297 94 aa1.83□□□□□ -2.12
CLK1-214ENST00000496205 RPL22P35268 128 aaKnown RBP1.83□□□□□ -2.12
CLK1-214ENST00000496205 ARPP19P56211 112 aa1.83□□□□□ -2.12
CLK1-214ENST00000496205 LSM3P62310 102 aaKnown RBP1.83□□□□□ -2.12
CLK1-214ENST00000496205 DYNLT1P63172 113 aa1.83□□□□□ -2.12
CLK1-214ENST00000496205 PYDC2Q56P42 97 aa1.83□□□□□ -2.12
CLK1-214ENST00000496205 LRRC18Q8N456 261 aa1.83□□□□□ -2.12
CLK1-214ENST00000496205 MMGT1Q8N4V1 131 aa1.83□□□□□ -2.12
CLK1-214ENST00000496205 OR5A2Q8NGI9 324 aa1.83□□□□□ -2.12
CLK1-214ENST00000496205 ZNF714Q96N38 554 aa1.83□□□□□ -2.12
CLK1-214ENST00000496205 TAS2R4Q9NYW5 299 aa1.83□□□□□ -2.12
CLK1-214ENST00000496205 CALML5Q9NZT1 146 aa1.83□□□□□ -2.12
CLK1-214ENST00000496205 U3KQ87 197 aa1.83□□□□□ -2.12
CLK1-214ENST00000496205 PRR14LQ5THK1 2151 aa1.83□□□□□ -2.12
CLK1-214ENST00000496205 DOCK4Q8N1I0 1966 aa1.83□□□□□ -2.12
CLK1-214ENST00000496205 ARHGEF28Q8N1W1 1705 aaKnown RBP1.83□□□□□ -2.12
CLK1-214ENST00000496205 SHANK3Q9BYB0 1731 aa1.83□□□□□ -2.12
CLK1-214ENST00000496205 DISP2A7MBM2 1401 aa1.83□□□□□ -2.12
CLK1-214ENST00000496205 SCAF11Q99590 1463 aaKnown RBP1.82□□□□□ -2.12
CLK1-214ENST00000496205 BICRAQ9NZM4 1560 aa1.82□□□□□ -2.12
CLK1-214ENST00000496205 MUC21A0A0G2JKD1 596 aa1.82□□□□□ -2.12
CLK1-214ENST00000496205 TRBV27A0A0K0K1C4 114 aa1.82□□□□□ -2.12
CLK1-214ENST00000496205 MUC21A0A140T8X8 626 aa1.82□□□□□ -2.12
CLK1-214ENST00000496205 H3BMG7 143 aa1.82□□□□□ -2.12
CLK1-214ENST00000496205 NCR2O95944 276 aa1.82□□□□□ -2.12
CLK1-214ENST00000496205 CXCL1P09341 107 aa1.82□□□□□ -2.12
CLK1-214ENST00000496205 PAEPP09466 180 aa1.82□□□□□ -2.12
CLK1-214ENST00000496205 TSPAN19P0C672 248 aa1.82□□□□□ -2.12
CLK1-214ENST00000496205 RAB5CP51148 216 aa1.82□□□□□ -2.12
CLK1-214ENST00000496205 NCS1P62166 190 aa1.82□□□□□ -2.12
CLK1-214ENST00000496205 SELENOWP63302 87 aa1.82□□□□□ -2.12
CLK1-214ENST00000496205 WHAMMP3Q1A5X7 153 aa1.82□□□□□ -2.12
CLK1-214ENST00000496205 TMEM155Q4W5P6 130 aa1.82□□□□□ -2.12
CLK1-214ENST00000496205 LCN15Q6UWW0 184 aa1.82□□□□□ -2.12
CLK1-214ENST00000496205 C4orf22Q6V702 233 aa1.82□□□□□ -2.12
CLK1-214ENST00000496205 C3orf56Q8N813 242 aa1.82□□□□□ -2.12
CLK1-214ENST00000496205 WFDC11Q8NEX6 87 aa1.82□□□□□ -2.12
CLK1-214ENST00000496205 OR4B1Q8NGF8 309 aa1.82□□□□□ -2.12
CLK1-214ENST00000496205 NAT14Q8WUY8 206 aa1.82□□□□□ -2.12
CLK1-214ENST00000496205 AP1S3Q96PC3 154 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms