RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 TVP23CQ96ET8 276 aa12.74□□□□□ -0.37
HLA-A-208ENST00000496081 CCDC140Q96MF4 163 aa12.74□□□□□ -0.37
HLA-A-208ENST00000496081 SMIM7Q9BQ49 75 aa12.74□□□□□ -0.37
HLA-A-208ENST00000496081 FAM223BA6NKX1 122 aa12.74□□□□□ -0.37
HLA-A-208ENST00000496081 SCGB2A1O75556 95 aa12.74□□□□□ -0.37
HLA-A-208ENST00000496081 CLEC3BP05452 202 aa12.74□□□□□ -0.37
HLA-A-208ENST00000496081 GPR183P32249 361 aa12.74□□□□□ -0.37
HLA-A-208ENST00000496081 AKR1C3P42330 323 aa12.74□□□□□ -0.37
HLA-A-208ENST00000496081 FAM223AQ8IWN6 122 aa12.74□□□□□ -0.37
HLA-A-208ENST00000496081 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.74□□□□□ -0.37
HLA-A-208ENST00000496081 STXBP6Q8NFX7 210 aa12.74□□□□□ -0.37
HLA-A-208ENST00000496081 EEF1AKMT3Q96AZ1 226 aa12.74□□□□□ -0.37
HLA-A-208ENST00000496081 RPS10P5Q9NQ39 176 aa12.74□□□□□ -0.37
HLA-A-208ENST00000496081 BRI3O95415 125 aa12.73□□□□□ -0.37
HLA-A-208ENST00000496081 TRGV3P03979 118 aa12.73□□□□□ -0.37
HLA-A-208ENST00000496081 ATP5G2Q06055 141 aa12.73□□□□□ -0.37
HLA-A-208ENST00000496081 USF2Q15853 346 aaPredicted RBP12.73□□□□□ -0.37
HLA-A-208ENST00000496081 CBLN2Q8IUK8 224 aa12.73□□□□□ -0.37
HLA-A-208ENST00000496081 TEX29Q8N6K0 151 aa12.73□□□□□ -0.37
HLA-A-208ENST00000496081 ZNF414Q96IQ9 312 aa12.73□□□□□ -0.37
HLA-A-208ENST00000496081 MYO9AB2RTY4 2548 aa12.73□□□□□ -0.37
HLA-A-208ENST00000496081 TRBV7-1A0A0A6YYK4 115 aa12.72□□□□□ -0.37
HLA-A-208ENST00000496081 A0A1W2PRE2 83 aa12.72□□□□□ -0.37
HLA-A-208ENST00000496081 GGTLC3B5MD39 225 aa12.72□□□□□ -0.37
HLA-A-208ENST00000496081 H3BUA1 57 aa12.72□□□□□ -0.37
HLA-A-208ENST00000496081 NDUFB4O95168 129 aa12.72□□□□□ -0.37
HLA-A-208ENST00000496081 GP9P14770 177 aa12.72□□□□□ -0.37
HLA-A-208ENST00000496081 RHEBQ15382 184 aa12.72□□□□□ -0.37
HLA-A-208ENST00000496081 CLEC19AQ6UXS0 136 aa12.72□□□□□ -0.37
HLA-A-208ENST00000496081 SHANK2-AS3Q9BTD1 123 aa12.72□□□□□ -0.37
HLA-A-208ENST00000496081 SDF2L1Q9HCN8 221 aa12.72□□□□□ -0.37
HLA-A-208ENST00000496081 ZNF580Q9UK33 172 aa12.72□□□□□ -0.37
HLA-A-208ENST00000496081 SCO2A0A1W2PP80 73 aa12.71□□□□□ -0.37
HLA-A-208ENST00000496081 H3BRN7 92 aa12.71□□□□□ -0.37
HLA-A-208ENST00000496081 CD5LO43866 347 aa12.71□□□□□ -0.37
HLA-A-208ENST00000496081 SNRPCP09234 159 aaKnown RBP12.71□□□□□ -0.37
HLA-A-208ENST00000496081 CFHR3Q02985 330 aa12.71□□□□□ -0.37
HLA-A-208ENST00000496081 TMEM95Q3KNT9 176 aa12.71□□□□□ -0.37
HLA-A-208ENST00000496081 ZNF343Q6P1L6 599 aa12.71□□□□□ -0.37
HLA-A-208ENST00000496081 DERL1Q9BUN8 251 aa12.71□□□□□ -0.37
HLA-A-208ENST00000496081 GAR1Q9NY12 217 aaKnown RBP12.71□□□□□ -0.37
HLA-A-208ENST00000496081 IGLV1-40P01703 118 aa12.71□□□□□ -0.38
HLA-A-208ENST00000496081 TPPP2P59282 170 aa12.71□□□□□ -0.38
HLA-A-208ENST00000496081 SUMO1P63165 101 aaKnown RBP12.71□□□□□ -0.38
HLA-A-208ENST00000496081 PNRC1Q12796 327 aaPredicted RBP12.71□□□□□ -0.38
HLA-A-208ENST00000496081 TMEM241Q24JQ0 296 aa12.71□□□□□ -0.38
HLA-A-208ENST00000496081 SIGLECL1Q8N7X8 197 aa12.71□□□□□ -0.38
HLA-A-208ENST00000496081 NAT8Q9UHE5 227 aa12.71□□□□□ -0.38
HLA-A-208ENST00000496081 ACANP16112 2415 aa12.7□□□□□ -0.38
HLA-A-208ENST00000496081 ZNF600Q6ZNG1 722 aa12.7□□□□□ -0.38
HLA-A-208ENST00000496081 C11orf52Q96A22 123 aa12.7□□□□□ -0.38
HLA-A-208ENST00000496081 ATP6V0BQ99437 205 aa12.7□□□□□ -0.38
HLA-A-208ENST00000496081 KLK15Q9H2R5 256 aa12.7□□□□□ -0.38
HLA-A-208ENST00000496081 TMEM14CQ9P0S9 112 aa12.7□□□□□ -0.38
HLA-A-208ENST00000496081 SONP18583 2426 aaKnown RBP12.69□□□□□ -0.38
HLA-A-208ENST00000496081 IGHV3-35A0A0C4DH35 117 aa12.69□□□□□ -0.38
HLA-A-208ENST00000496081 TGOLN2O43493 480 aa12.69□□□□□ -0.38
HLA-A-208ENST00000496081 NBEAP1P0C6P0 100 aa12.69□□□□□ -0.38
HLA-A-208ENST00000496081 PF4V1P10720 104 aa12.69□□□□□ -0.38
HLA-A-208ENST00000496081 CRYBB3P26998 211 aa12.69□□□□□ -0.38
HLA-A-208ENST00000496081 SRP14P37108 136 aaKnown RBP12.69□□□□□ -0.38
HLA-A-208ENST00000496081 BLNKQ8WV28 456 aa12.69□□□□□ -0.38
HLA-A-208ENST00000496081 PRSS22Q9GZN4 317 aa12.69□□□□□ -0.38
HLA-A-208ENST00000496081 YAE1D1Q9NRH1 226 aa12.69□□□□□ -0.38
HLA-A-208ENST00000496081 ZNF98A6NK75 572 aa12.68□□□□□ -0.38
HLA-A-208ENST00000496081 RPL23P62829 140 aaKnown RBP12.68□□□□□ -0.38
HLA-A-208ENST00000496081 TOMM20LQ6UXN7 152 aa12.68□□□□□ -0.38
HLA-A-208ENST00000496081 S100A7AQ86SG5 101 aa12.68□□□□□ -0.38
HLA-A-208ENST00000496081 USMG5Q96IX5 58 aa12.68□□□□□ -0.38
HLA-A-208ENST00000496081 ELOVL1Q9BW60 279 aa12.68□□□□□ -0.38
HLA-A-208ENST00000496081 ZFAND3Q9H8U3 227 aa12.68□□□□□ -0.38
HLA-A-208ENST00000496081 GNB4Q9HAV0 340 aa12.68□□□□□ -0.38
HLA-A-208ENST00000496081 SMCO4Q9NRQ5 59 aa12.68□□□□□ -0.38
HLA-A-208ENST00000496081 B4DEV8 164 aa12.67□□□□□ -0.38
HLA-A-208ENST00000496081 MYCNOSP40205 109 aa12.67□□□□□ -0.38
HLA-A-208ENST00000496081 RANP62826 216 aaKnown RBP12.67□□□□□ -0.38
HLA-A-208ENST00000496081 LCNL1Q6ZST4 164 aa12.67□□□□□ -0.38
HLA-A-208ENST00000496081 ZNF329Q86UD4 541 aa12.67□□□□□ -0.38
HLA-A-208ENST00000496081 DUX5Q96PT3 197 aa12.67□□□□□ -0.38
HLA-A-208ENST00000496081 NPFFR1Q9GZQ6 430 aa12.67□□□□□ -0.38
HLA-A-208ENST00000496081 ZNF702PQ9H963 129 aa12.67□□□□□ -0.38
HLA-A-208ENST00000496081 TRBV20OR9-2A0A075B6H5 130 aa12.66□□□□□ -0.38
HLA-A-208ENST00000496081 PPP5D1E7EU14 171 aa12.66□□□□□ -0.38
HLA-A-208ENST00000496081 H3BTX0 84 aa12.66□□□□□ -0.38
HLA-A-208ENST00000496081 IGHG4P01861 327 aa12.66□□□□□ -0.38
HLA-A-208ENST00000496081 HIST1H1EP10412 219 aaKnown RBP12.66□□□□□ -0.38
HLA-A-208ENST00000496081 RAB9AP51151 201 aa12.66□□□□□ -0.38
HLA-A-208ENST00000496081 ADIRFQ15847 76 aa12.66□□□□□ -0.38
HLA-A-208ENST00000496081 BPIFA4PQ86YQ2 179 aa12.66□□□□□ -0.38
HLA-A-208ENST00000496081 ZNF586Q9NXT0 402 aa12.66□□□□□ -0.38
HLA-A-208ENST00000496081 RABAC1Q9UI14 185 aa12.66□□□□□ -0.38
HLA-A-208ENST00000496081 IGHV3OR16-8A0A075B7F1 116 aa12.66□□□□□ -0.38
HLA-A-208ENST00000496081 A0A087WWC5 75 aa12.66□□□□□ -0.38
HLA-A-208ENST00000496081 BMPR1BO00238 502 aa12.66□□□□□ -0.38
HLA-A-208ENST00000496081 MRPS12O15235 138 aaKnown RBP12.66□□□□□ -0.38
HLA-A-208ENST00000496081 C2CD4CQ8TF44 421 aa12.66□□□□□ -0.38
HLA-A-208ENST00000496081 PSMB8P28062 276 aa12.65□□□□□ -0.38
HLA-A-208ENST00000496081 RPL35P42766 123 aaKnown RBP12.65□□□□□ -0.38
HLA-A-208ENST00000496081 TUBA4BQ9H853 241 aa12.65□□□□□ -0.38
HLA-A-208ENST00000496081 TMA7Q9Y2S6 64 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms