RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 MED12LQ86YW9 2145 aa3.83□□□□□ -1.8
PRKD3-210ENST00000494667 A0A1B0GX51 115 aa3.83□□□□□ -1.8
PRKD3-210ENST00000494667 B5MCH6 92 aa3.83□□□□□ -1.8
PRKD3-210ENST00000494667 SNAI2O43623 268 aa3.83□□□□□ -1.8
PRKD3-210ENST00000494667 RNASE2P10153 161 aaKnown RBP3.83□□□□□ -1.8
PRKD3-210ENST00000494667 FAM104BQ5XKR9 115 aa3.83□□□□□ -1.8
PRKD3-210ENST00000494667 YRDCQ86U90 279 aaKnown RBP3.83□□□□□ -1.8
PRKD3-210ENST00000494667 ZNF808Q8N4W9 903 aaPredicted RBP3.83□□□□□ -1.8
PRKD3-210ENST00000494667 TMEM75Q8N9X5 138 aa3.83□□□□□ -1.8
PRKD3-210ENST00000494667 OR4C13Q8NGP0 309 aa3.83□□□□□ -1.8
PRKD3-210ENST00000494667 DNAJC30Q96LL9 226 aa3.83□□□□□ -1.8
PRKD3-210ENST00000494667 SLC25A39Q9BZJ4 359 aaPredicted RBP3.83□□□□□ -1.8
PRKD3-210ENST00000494667 ZNF71Q9NQZ8 489 aaPredicted RBP3.83□□□□□ -1.8
PRKD3-210ENST00000494667 RALYQ9UKM9 306 aaKnown RBP3.83□□□□□ -1.8
PRKD3-210ENST00000494667 KLF13Q9Y2Y9 288 aaPredicted RBP3.83□□□□□ -1.8
PRKD3-210ENST00000494667 IGKV2D-26A0A0A0MRZ7 120 aa3.83□□□□□ -1.8
PRKD3-210ENST00000494667 K7ERJ3 54 aa3.83□□□□□ -1.8
PRKD3-210ENST00000494667 TCRAP04437 139 aa3.83□□□□□ -1.8
PRKD3-210ENST00000494667 RPL13AP40429 203 aaKnown RBP3.83□□□□□ -1.8
PRKD3-210ENST00000494667 RPS16P62249 146 aaKnown RBP3.83□□□□□ -1.8
PRKD3-210ENST00000494667 PATE2Q6UY27 113 aa3.83□□□□□ -1.8
PRKD3-210ENST00000494667 C16orf47Q6ZP98 133 aaPredicted RBP3.83□□□□□ -1.8
PRKD3-210ENST00000494667 PRSS3P2Q8NHM4 247 aa3.83□□□□□ -1.8
PRKD3-210ENST00000494667 CNFNQ9BYD5 112 aa3.83□□□□□ -1.8
PRKD3-210ENST00000494667 OTORQ9NRC9 128 aa3.83□□□□□ -1.8
PRKD3-210ENST00000494667 NHP2Q9NX24 153 aaKnown RBP3.83□□□□□ -1.8
PRKD3-210ENST00000494667 RNF186Q9NXI6 227 aa3.83□□□□□ -1.8
PRKD3-210ENST00000494667 A0A1W2PPI3 338 aa3.82□□□□□ -1.8
PRKD3-210ENST00000494667 PGPA6NDG6 321 aa3.82□□□□□ -1.8
PRKD3-210ENST00000494667 PRSS29PA6NIE9 313 aa3.82□□□□□ -1.8
PRKD3-210ENST00000494667 GP9P14770 177 aa3.82□□□□□ -1.8
PRKD3-210ENST00000494667 ACP1P24666 158 aa3.82□□□□□ -1.8
PRKD3-210ENST00000494667 MRPS21P82921 87 aaKnown RBP3.82□□□□□ -1.8
PRKD3-210ENST00000494667 SPINK9Q5DT21 86 aa3.82□□□□□ -1.8
PRKD3-210ENST00000494667 ZCCHC24Q8N2G6 241 aaKnown RBP3.82□□□□□ -1.8
PRKD3-210ENST00000494667 RASL10AQ92737 203 aa3.82□□□□□ -1.8
PRKD3-210ENST00000494667 AJUBAQ96IF1 538 aa3.82□□□□□ -1.8
PRKD3-210ENST00000494667 LINC00574Q9H8X3 128 aa3.82□□□□□ -1.8
PRKD3-210ENST00000494667 IGKV1D-37A0A075B6S9 117 aa3.82□□□□□ -1.8
PRKD3-210ENST00000494667 TRAV12-1A0A0B4J245 112 aa3.82□□□□□ -1.8
PRKD3-210ENST00000494667 UPK2O00526 184 aa3.82□□□□□ -1.8
PRKD3-210ENST00000494667 IGKCP01834 107 aa3.82□□□□□ -1.8
PRKD3-210ENST00000494667 COL8A2P25067 703 aa3.82□□□□□ -1.8
PRKD3-210ENST00000494667 FCER1GP30273 86 aa3.82□□□□□ -1.8
PRKD3-210ENST00000494667 IFI27P40305 119 aaPredicted RBP3.82□□□□□ -1.8
PRKD3-210ENST00000494667 FOXG1P55316 489 aaPredicted RBP3.82□□□□□ -1.8
PRKD3-210ENST00000494667 MORN5Q5VZ52 161 aa3.82□□□□□ -1.8
PRKD3-210ENST00000494667 ORMDL3Q8N138 153 aa3.82□□□□□ -1.8
PRKD3-210ENST00000494667 MCRIP2Q9BUT9 160 aaKnown RBP3.82□□□□□ -1.8
PRKD3-210ENST00000494667 HCFC1P51610 2035 aa3.82□□□□□ -1.8
PRKD3-210ENST00000494667 IQCF6A8MYZ5 107 aa3.82□□□□□ -1.8
PRKD3-210ENST00000494667 PSPNO60542 156 aa3.82□□□□□ -1.8
PRKD3-210ENST00000494667 DPM2O94777 84 aa3.82□□□□□ -1.8
PRKD3-210ENST00000494667 CGB3P0DN86 165 aa3.82□□□□□ -1.8
PRKD3-210ENST00000494667 CGB7P0DN87 165 aa3.82□□□□□ -1.8
PRKD3-210ENST00000494667 IFITM1P13164 125 aa3.82□□□□□ -1.8
PRKD3-210ENST00000494667 MYOD1P15172 320 aa3.82□□□□□ -1.8
PRKD3-210ENST00000494667 RPS28P62857 69 aaKnown RBP3.82□□□□□ -1.8
PRKD3-210ENST00000494667 C10orf113Q5VZT2 155 aa3.82□□□□□ -1.8
PRKD3-210ENST00000494667 PDPNQ86YL7 162 aa3.82□□□□□ -1.8
PRKD3-210ENST00000494667 C11orf53Q8IXP5 236 aa3.82□□□□□ -1.8
PRKD3-210ENST00000494667 ENY2Q9NPA8 101 aa3.82□□□□□ -1.8
PRKD3-210ENST00000494667 SIGLEC9Q9Y336 463 aa3.82□□□□□ -1.8
PRKD3-210ENST00000494667 GOLGB1Q14789 3259 aaKnown RBP3.82□□□□□ -1.8
PRKD3-210ENST00000494667 TRAV3A0A0B4J244 114 aa3.81□□□□□ -1.8
PRKD3-210ENST00000494667 FAM240AA0A1B0GVK7 77 aa3.81□□□□□ -1.8
PRKD3-210ENST00000494667 C5orf49A4QMS7 147 aa3.81□□□□□ -1.8
PRKD3-210ENST00000494667 ZNF138P52744 262 aa3.81□□□□□ -1.8
PRKD3-210ENST00000494667 PRSS12P56730 875 aa3.81□□□□□ -1.8
PRKD3-210ENST00000494667 LOXL3P58215 753 aa3.81□□□□□ -1.8
PRKD3-210ENST00000494667 LOXL1Q08397 574 aaPredicted RBP3.81□□□□□ -1.8
PRKD3-210ENST00000494667 TWIST1Q15672 202 aa3.81□□□□□ -1.8
PRKD3-210ENST00000494667 PPP1R27Q86WC6 154 aa3.81□□□□□ -1.8
PRKD3-210ENST00000494667 LRRC75A-AS1Q8N1F1 130 aa3.81□□□□□ -1.8
PRKD3-210ENST00000494667 LYPD1Q8N2G4 141 aa3.81□□□□□ -1.8
PRKD3-210ENST00000494667 SMIM20Q8N5G0 67 aa3.81□□□□□ -1.8
PRKD3-210ENST00000494667 OR11H6Q8NGC7 330 aa3.81□□□□□ -1.8
PRKD3-210ENST00000494667 B4GALT7Q9UBV7 327 aa3.81□□□□□ -1.8
PRKD3-210ENST00000494667 TANC2Q9HCD6 1990 aa3.81□□□□□ -1.8
PRKD3-210ENST00000494667 MYMXA0A1B0GTQ4 84 aa3.81□□□□□ -1.8
PRKD3-210ENST00000494667 KLK10O43240 276 aa3.81□□□□□ -1.8
PRKD3-210ENST00000494667 SPINT2O43291 252 aa3.81□□□□□ -1.8
PRKD3-210ENST00000494667 NMUP48645 174 aa3.81□□□□□ -1.8
PRKD3-210ENST00000494667 DEFB121Q5J5C9 76 aa3.81□□□□□ -1.8
PRKD3-210ENST00000494667 OR10J6PQ8NGY7 276 aa3.81□□□□□ -1.8
PRKD3-210ENST00000494667 S1PR3Q99500 378 aa3.81□□□□□ -1.8
PRKD3-210ENST00000494667 IGHV1-45A0A0A0MS14 117 aa3.81□□□□□ -1.8
PRKD3-210ENST00000494667 IGHV3-15A0A0B4J1V0 119 aa3.81□□□□□ -1.8
PRKD3-210ENST00000494667 TRAV5A0A0B4J249 113 aa3.81□□□□□ -1.8
PRKD3-210ENST00000494667 TRBV7-7A0A0K0K1E9 115 aa3.81□□□□□ -1.8
PRKD3-210ENST00000494667 FCGR3BO75015 233 aa3.81□□□□□ -1.8
PRKD3-210ENST00000494667 SRCAPQ6ZRS2 3230 aa3.81□□□□□ -1.8
PRKD3-210ENST00000494667 OR8A1Q8NGG7 326 aa3.81□□□□□ -1.8
PRKD3-210ENST00000494667 DAZAP1Q96EP5 407 aaKnown RBP3.81□□□□□ -1.8
PRKD3-210ENST00000494667 LINC01587Q99440 93 aa3.81□□□□□ -1.8
PRKD3-210ENST00000494667 TRGV9Q99603 122 aa3.81□□□□□ -1.8
PRKD3-210ENST00000494667 PRRG4Q9BZD6 226 aa3.81□□□□□ -1.8
PRKD3-210ENST00000494667 RAB9BQ9NP90 201 aa3.81□□□□□ -1.8
PRKD3-210ENST00000494667 NXT2Q9NPJ8 142 aaKnown RBP3.81□□□□□ -1.8
PRKD3-210ENST00000494667 DKK2Q9UBU2 259 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms