RNA–Protein interactions for RNA: ENST00000494618.1

NCL-210, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-210ENST00000494618 ADGRB2O60241 1585 aa1.08□□□□□ -2.24
NCL-210ENST00000494618 FBN2P35556 2912 aa1.08□□□□□ -2.24
NCL-210ENST00000494618 EIF3AQ14152 1382 aaKnown RBP1.08□□□□□ -2.24
NCL-210ENST00000494618 MTUS2Q5JR59 1369 aa1.08□□□□□ -2.24
NCL-210ENST00000494618 KIF24Q5T7B8 1368 aa1.08□□□□□ -2.24
NCL-210ENST00000494618 LRRK2Q5S007 2527 aa1.08□□□□□ -2.24
NCL-210ENST00000494618 ZFYVE26Q68DK2 2539 aa1.08□□□□□ -2.24
NCL-210ENST00000494618 RELNP78509 3460 aa1.08□□□□□ -2.24
NCL-210ENST00000494618 LAMC1P11047 1609 aa1.07□□□□□ -2.24
NCL-210ENST00000494618 PCNX1Q96RV3 2341 aa1.07□□□□□ -2.24
NCL-210ENST00000494618 CLIP1P30622 1438 aa1.07□□□□□ -2.24
NCL-210ENST00000494618 CEP162Q5TB80 1403 aa1.07□□□□□ -2.24
NCL-210ENST00000494618 FGD6Q6ZV73 1430 aa1.07□□□□□ -2.24
NCL-210ENST00000494618 COL6A5A8TX70 2615 aa1.07□□□□□ -2.24
NCL-210ENST00000494618 ZNF142P52746 1687 aaPredicted RBP1.07□□□□□ -2.24
NCL-210ENST00000494618 MYH3P11055 1940 aa1.07□□□□□ -2.24
NCL-210ENST00000494618 MYH1P12882 1939 aa1.07□□□□□ -2.24
NCL-210ENST00000494618 NCOR1O75376 2440 aa1.07□□□□□ -2.24
NCL-210ENST00000494618 GVINP1Q7Z2Y8 2422 aa1.07□□□□□ -2.24
NCL-210ENST00000494618 ZNF518AQ6AHZ1 1483 aa1.07□□□□□ -2.24
NCL-210ENST00000494618 TNS1Q9HBL0 1735 aaKnown RBP1.07□□□□□ -2.24
NCL-210ENST00000494618 MYH9P35579 1960 aaKnown RBP1.07□□□□□ -2.24
NCL-210ENST00000494618 PIEZO2Q9H5I5 2752 aa1.07□□□□□ -2.24
NCL-210ENST00000494618 hADV38S2A0JD32 116 aa1.07□□□□□ -2.24
NCL-210ENST00000494618 TMEM212A6NML5 194 aa1.07□□□□□ -2.24
NCL-210ENST00000494618 PDE6DO43924 150 aa1.07□□□□□ -2.24
NCL-210ENST00000494618 FADS1O60427 444 aa1.07□□□□□ -2.24
NCL-210ENST00000494618 PROSCO94903 275 aa1.07□□□□□ -2.24
NCL-210ENST00000494618 HAND1O96004 215 aa1.07□□□□□ -2.24
NCL-210ENST00000494618 CLPSP04118 112 aa1.07□□□□□ -2.24
NCL-210ENST00000494618 HMGN1P05114 100 aa1.07□□□□□ -2.24
NCL-210ENST00000494618 SERPINE1P05121 402 aa1.07□□□□□ -2.24
NCL-210ENST00000494618 C8GP07360 202 aa1.07□□□□□ -2.24
NCL-210ENST00000494618 PLCXD2Q0VAA5 305 aa1.07□□□□□ -2.24
NCL-210ENST00000494618 KISS1Q15726 138 aa1.07□□□□□ -2.24
NCL-210ENST00000494618 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.07□□□□□ -2.24
NCL-210ENST00000494618 CLVS1Q8IUQ0 354 aaPredicted RBP1.07□□□□□ -2.24
NCL-210ENST00000494618 Q8N2B8 174 aa1.07□□□□□ -2.24
NCL-210ENST00000494618 SIGLECL1Q8N7X8 197 aa1.07□□□□□ -2.24
NCL-210ENST00000494618 C4orf3Q8WVX3 66 aa1.07□□□□□ -2.24
NCL-210ENST00000494618 AQP3Q92482 292 aa1.07□□□□□ -2.24
NCL-210ENST00000494618 C6orf62Q9GZU0 229 aaPredicted RBP1.07□□□□□ -2.24
NCL-210ENST00000494618 TAS2R7Q9NYW3 318 aa1.07□□□□□ -2.24
NCL-210ENST00000494618 EPDR1Q9UM22 224 aa1.07□□□□□ -2.24
NCL-210ENST00000494618 WNK3Q9BYP7 1800 aa1.07□□□□□ -2.24
NCL-210ENST00000494618 SPEF2Q9C093 1822 aa1.07□□□□□ -2.24
NCL-210ENST00000494618 RYR3Q15413 4870 aa1.07□□□□□ -2.24
NCL-210ENST00000494618 RTL1A6NKG5 1358 aa1.07□□□□□ -2.24
NCL-210ENST00000494618 TCHHQ07283 1943 aa1.07□□□□□ -2.24
NCL-210ENST00000494618 AKAP11Q9UKA4 1901 aa1.07□□□□□ -2.24
NCL-210ENST00000494618 C3P01024 1663 aa1.07□□□□□ -2.24
NCL-210ENST00000494618 CUL7Q14999 1698 aa1.07□□□□□ -2.24
NCL-210ENST00000494618 CHD5Q8TDI0 1954 aa1.07□□□□□ -2.24
NCL-210ENST00000494618 ATRQ13535 2644 aa1.06□□□□□ -2.24
NCL-210ENST00000494618 CAMSAP2Q08AD1 1489 aa1.06□□□□□ -2.24
NCL-210ENST00000494618 FANCD2Q9BXW9 1451 aa1.06□□□□□ -2.24
NCL-210ENST00000494618 KIF1BO60333 1816 aa1.06□□□□□ -2.24
NCL-210ENST00000494618 RYR1P21817 5038 aa1.06□□□□□ -2.24
NCL-210ENST00000494618 EFCAB10A6NFE3 127 aa1.06□□□□□ -2.24
NCL-210ENST00000494618 TMEM114B3SHH9 223 aa1.06□□□□□ -2.24
NCL-210ENST00000494618 CNIH1O95406 144 aa1.06□□□□□ -2.24
NCL-210ENST00000494618 TCRBP04435 133 aa1.06□□□□□ -2.24
NCL-210ENST00000494618 CTSDP07339 412 aaPredicted RBP1.06□□□□□ -2.24
NCL-210ENST00000494618 ASAH2BP0C7U1 165 aa1.06□□□□□ -2.24
NCL-210ENST00000494618 MIFP14174 115 aa1.06□□□□□ -2.24
NCL-210ENST00000494618 BRS3P32247 399 aa1.06□□□□□ -2.24
NCL-210ENST00000494618 RPS20P60866 119 aaKnown RBP1.06□□□□□ -2.24
NCL-210ENST00000494618 VBP1P61758 197 aa1.06□□□□□ -2.24
NCL-210ENST00000494618 LSM6P62312 80 aaKnown RBP1.06□□□□□ -2.24
NCL-210ENST00000494618 FADDQ13158 208 aa1.06□□□□□ -2.24
NCL-210ENST00000494618 SURF2Q15527 256 aaPredicted RBP1.06□□□□□ -2.24
NCL-210ENST00000494618 ALX1Q15699 326 aa1.06□□□□□ -2.24
NCL-210ENST00000494618 C3orf62Q6ZUJ4 267 aa1.06□□□□□ -2.24
NCL-210ENST00000494618 STX12Q86Y82 276 aa1.06□□□□□ -2.24
NCL-210ENST00000494618 ZNF565Q8N9K5 539 aa1.06□□□□□ -2.24
NCL-210ENST00000494618 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.06□□□□□ -2.24
NCL-210ENST00000494618 OR4C6Q8NH72 309 aa1.06□□□□□ -2.24
NCL-210ENST00000494618 CHMP6Q96FZ7 201 aa1.06□□□□□ -2.24
NCL-210ENST00000494618 C9orf16Q9BUW7 83 aa1.06□□□□□ -2.24
NCL-210ENST00000494618 KIFC1Q9BW19 673 aa1.06□□□□□ -2.24
NCL-210ENST00000494618 PARD6GQ9BYG4 376 aaPredicted RBP1.06□□□□□ -2.24
NCL-210ENST00000494618 ARMC1Q9NVT9 282 aa1.06□□□□□ -2.24
NCL-210ENST00000494618 SLC35A3Q9Y2D2 325 aa1.06□□□□□ -2.24
NCL-210ENST00000494618 SHROOM2Q13796 1616 aa1.06□□□□□ -2.24
NCL-210ENST00000494618 KIF14Q15058 1648 aa1.06□□□□□ -2.24
NCL-210ENST00000494618 ABCA5Q8WWZ7 1642 aa1.06□□□□□ -2.24
NCL-210ENST00000494618 ITSN2Q9NZM3 1697 aa1.06□□□□□ -2.24
NCL-210ENST00000494618 CDC42BPAQ5VT25 1732 aa1.06□□□□□ -2.24
NCL-210ENST00000494618 TEX15Q9BXT5 2789 aa1.06□□□□□ -2.24
NCL-210ENST00000494618 BIRC6Q9NR09 4857 aa1.06□□□□□ -2.24
NCL-210ENST00000494618 GPR98Q8WXG9 6306 aa1.06□□□□□ -2.24
NCL-210ENST00000494618 CPSF1Q10570 1443 aaKnown RBP1.06□□□□□ -2.24
NCL-210ENST00000494618 WRNQ14191 1432 aaPredicted RBP eCLIP1.06□□□□□ -2.24
NCL-210ENST00000494618 SETD5Q9C0A6 1442 aa1.06□□□□□ -2.24
NCL-210ENST00000494618 TLN1Q9Y490 2541 aaKnown RBP1.06□□□□□ -2.24
NCL-210ENST00000494618 LRRC9Q6ZRR7 1453 aa1.05□□□□□ -2.24
NCL-210ENST00000494618 RTTNQ86VV8 2226 aa1.05□□□□□ -2.24
NCL-210ENST00000494618 PRDM15P57071 1507 aaPredicted RBP1.05□□□□□ -2.24
NCL-210ENST00000494618 ZMYM4Q5VZL5 1548 aa1.05□□□□□ -2.24
NCL-210ENST00000494618 DNMBPQ6XZF7 1577 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms