RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 PRSS3P2Q8NHM4 247 aa8.13□□□□□ -1.11
LINC00488-201ENST00000494582 C12orf49Q9H741 205 aa8.13□□□□□ -1.11
LINC00488-201ENST00000494582 ZFHX4Q86UP3 3567 aa8.13□□□□□ -1.11
LINC00488-201ENST00000494582 IGKV1D-37A0A075B6S9 117 aa8.13□□□□□ -1.11
LINC00488-201ENST00000494582 KBTBD11-OT1A0A1B0GTJ5 212 aa8.13□□□□□ -1.11
LINC00488-201ENST00000494582 TEX50A0A1B0GTY4 177 aa8.13□□□□□ -1.11
LINC00488-201ENST00000494582 TCRBV4S1A1TA0A5B7 111 aa8.13□□□□□ -1.11
LINC00488-201ENST00000494582 SAA2P0DJI9 122 aaPredicted RBP8.13□□□□□ -1.11
LINC00488-201ENST00000494582 CSN1S1P47710 185 aa8.13□□□□□ -1.11
LINC00488-201ENST00000494582 PRCDQ00LT1 54 aa8.13□□□□□ -1.11
LINC00488-201ENST00000494582 CFAP161Q6P656 301 aa8.13□□□□□ -1.11
LINC00488-201ENST00000494582 PRR7Q8TB68 274 aa8.13□□□□□ -1.11
LINC00488-201ENST00000494582 ZNF714Q96N38 554 aa8.13□□□□□ -1.11
LINC00488-201ENST00000494582 ZNF492Q9P255 531 aa8.13□□□□□ -1.11
LINC00488-201ENST00000494582 COLQQ9Y215 455 aaPredicted RBP8.13□□□□□ -1.11
LINC00488-201ENST00000494582 E7EUB6 86 aa8.12□□□□□ -1.11
LINC00488-201ENST00000494582 NPIPB6E9PJ23 425 aa8.12□□□□□ -1.11
LINC00488-201ENST00000494582 IGKV1-16P04430 117 aa8.12□□□□□ -1.11
LINC00488-201ENST00000494582 FHL3Q13643 280 aa8.12□□□□□ -1.11
LINC00488-201ENST00000494582 C2orf83Q53S99 150 aa8.12□□□□□ -1.11
LINC00488-201ENST00000494582 CT45A1Q5HYN5 189 aa8.12□□□□□ -1.11
LINC00488-201ENST00000494582 CT45A3Q8NHU0 189 aa8.12□□□□□ -1.11
LINC00488-201ENST00000494582 GFRA4Q9GZZ7 299 aa8.12□□□□□ -1.11
LINC00488-201ENST00000494582 OBP2BQ9NPH6 170 aa8.12□□□□□ -1.11
LINC00488-201ENST00000494582 NHP2Q9NX24 153 aaKnown RBP8.12□□□□□ -1.11
LINC00488-201ENST00000494582 SIGLEC8Q9NYZ4 499 aa8.12□□□□□ -1.11
LINC00488-201ENST00000494582 PRO0461Q9UI25 63 aa8.12□□□□□ -1.11
LINC00488-201ENST00000494582 PRRC2CQ9Y520 2896 aaKnown RBP8.12□□□□□ -1.11
LINC00488-201ENST00000494582 E9PLD3 99 aa8.12□□□□□ -1.11
LINC00488-201ENST00000494582 PPIFP30405 207 aaKnown RBP8.12□□□□□ -1.11
LINC00488-201ENST00000494582 RPRMLQ8N4K4 120 aa8.12□□□□□ -1.11
LINC00488-201ENST00000494582 ZNRD1Q9P1U0 126 aa8.12□□□□□ -1.11
LINC00488-201ENST00000494582 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.11□□□□□ -1.11
LINC00488-201ENST00000494582 TSPAN13O95857 204 aa8.11□□□□□ -1.11
LINC00488-201ENST00000494582 CYC1P08574 325 aa8.11□□□□□ -1.11
LINC00488-201ENST00000494582 LINC00305Q7Z4B0 112 aa8.11□□□□□ -1.11
LINC00488-201ENST00000494582 PDPNQ86YL7 162 aa8.11□□□□□ -1.11
LINC00488-201ENST00000494582 OR5AN1Q8NGI8 311 aa8.11□□□□□ -1.11
LINC00488-201ENST00000494582 CDIP1Q9H305 208 aa8.11□□□□□ -1.11
LINC00488-201ENST00000494582 JPT1Q9UK76 154 aa8.11□□□□□ -1.11
LINC00488-201ENST00000494582 FZR1Q9UM11 496 aa8.11□□□□□ -1.11
LINC00488-201ENST00000494582 PCSK5Q92824 1860 aa8.11□□□□□ -1.11
LINC00488-201ENST00000494582 LY6G6EA0A0G2JKS1 128 aa8.11□□□□□ -1.11
LINC00488-201ENST00000494582 SERTM2A0A1B0GWG4 89 aa8.11□□□□□ -1.11
LINC00488-201ENST00000494582 IQCF6A8MYZ5 107 aa8.11□□□□□ -1.11
LINC00488-201ENST00000494582 IGLL5B9A064 214 aa8.11□□□□□ -1.11
LINC00488-201ENST00000494582 F8W1H4 67 aa8.11□□□□□ -1.11
LINC00488-201ENST00000494582 PAX8Q06710 450 aa8.11□□□□□ -1.11
LINC00488-201ENST00000494582 NPIPB3Q92617 1050 aa8.11□□□□□ -1.11
LINC00488-201ENST00000494582 COL25A1Q9BXS0 654 aaPredicted RBP8.11□□□□□ -1.11
LINC00488-201ENST00000494582 HES7Q9BYE0 225 aa8.11□□□□□ -1.11
LINC00488-201ENST00000494582 B4GALT7Q9UBV7 327 aa8.11□□□□□ -1.11
LINC00488-201ENST00000494582 PRNDQ9UKY0 176 aa8.11□□□□□ -1.11
LINC00488-201ENST00000494582 U3KQA8 63 aa8.11□□□□□ -1.11
LINC00488-201ENST00000494582 WI2-2373I1.2A0A1W2PRP0 233 aa8.1□□□□□ -1.11
LINC00488-201ENST00000494582 UPK2O00526 184 aa8.1□□□□□ -1.11
LINC00488-201ENST00000494582 PRRG2O14669 202 aa8.1□□□□□ -1.11
LINC00488-201ENST00000494582 COL8A1P27658 744 aa8.1□□□□□ -1.11
LINC00488-201ENST00000494582 C5orf64Q2M2E5 130 aa8.1□□□□□ -1.11
LINC00488-201ENST00000494582 SPINK14Q6IE38 97 aa8.1□□□□□ -1.11
LINC00488-201ENST00000494582 FLYWCH2Q96CP2 140 aaKnown RBP8.1□□□□□ -1.11
LINC00488-201ENST00000494582 RNF183Q96D59 192 aa8.1□□□□□ -1.11
LINC00488-201ENST00000494582 DAZAP1Q96EP5 407 aaKnown RBP8.1□□□□□ -1.11
LINC00488-201ENST00000494582 ZNF414Q96IQ9 312 aa8.1□□□□□ -1.11
LINC00488-201ENST00000494582 CHAC1Q9BUX1 264 aa8.1□□□□□ -1.11
LINC00488-201ENST00000494582 SS18L2Q9UHA2 77 aa8.1□□□□□ -1.11
LINC00488-201ENST00000494582 LINC00312Q9Y6C7 94 aa8.1□□□□□ -1.11
LINC00488-201ENST00000494582 DCHS1Q96JQ0 3298 aa8.1□□□□□ -1.11
LINC00488-201ENST00000494582 IGKV1D-17A0A075B6S4 117 aa8.1□□□□□ -1.11
LINC00488-201ENST00000494582 DLL1O00548 723 aa8.1□□□□□ -1.11
LINC00488-201ENST00000494582 MT-ATP8P03928 68 aa8.1□□□□□ -1.11
LINC00488-201ENST00000494582 TCRAP04437 139 aa8.1□□□□□ -1.11
LINC00488-201ENST00000494582 KIR2DL2P43627 348 aaPredicted RBP8.1□□□□□ -1.11
LINC00488-201ENST00000494582 KIR2DS2P43631 304 aa8.1□□□□□ -1.11
LINC00488-201ENST00000494582 IGHV3OR15-7A0A075B7D8 119 aa8.09□□□□□ -1.11
LINC00488-201ENST00000494582 A0A1B0GUT8 65 aa8.09□□□□□ -1.11
LINC00488-201ENST00000494582 A6NJY4 79 aa8.09□□□□□ -1.11
LINC00488-201ENST00000494582 D6R8Y8 96 aa8.09□□□□□ -1.11
LINC00488-201ENST00000494582 SLC25A17O43808 307 aa8.09□□□□□ -1.11
LINC00488-201ENST00000494582 IGLV2-11P01706 119 aa8.09□□□□□ -1.11
LINC00488-201ENST00000494582 PRDX2P32119 198 aa8.09□□□□□ -1.11
LINC00488-201ENST00000494582 TBC1D28Q2M2D7 210 aa8.09□□□□□ -1.11
LINC00488-201ENST00000494582 INO80CQ6PI98 192 aaPredicted RBP8.09□□□□□ -1.11
LINC00488-201ENST00000494582 Q86TA4 180 aa8.09□□□□□ -1.11
LINC00488-201ENST00000494582 OR1L8Q8NGR8 309 aa8.09□□□□□ -1.11
LINC00488-201ENST00000494582 KLF14Q8TD94 323 aaPredicted RBP8.09□□□□□ -1.11
LINC00488-201ENST00000494582 MRPL16Q9NX20 251 aaKnown RBP8.09□□□□□ -1.11
LINC00488-201ENST00000494582 NDUFS7O75251 213 aa8.09□□□□□ -1.11
LINC00488-201ENST00000494582 ORM2P19652 201 aa8.09□□□□□ -1.11
LINC00488-201ENST00000494582 C8orf86Q6ZUL3 223 aa8.09□□□□□ -1.11
LINC00488-201ENST00000494582 ZNRF1Q8ND25 227 aa8.09□□□□□ -1.11
LINC00488-201ENST00000494582 SRSF12Q8WXF0 261 aaKnown RBP8.09□□□□□ -1.11
LINC00488-201ENST00000494582 FMC1Q96HJ9 113 aa8.09□□□□□ -1.11
LINC00488-201ENST00000494582 AGRNO00468 2067 aa8.09□□□□□ -1.11
LINC00488-201ENST00000494582 SMG1Q96Q15 3661 aaKnown RBP8.09□□□□□ -1.11
LINC00488-201ENST00000494582 URB1O60287 2271 aaKnown RBP8.09□□□□□ -1.12
LINC00488-201ENST00000494582 C19orf67A6NJJ6 358 aa8.08□□□□□ -1.12
LINC00488-201ENST00000494582 J3QR89 54 aa8.08□□□□□ -1.12
LINC00488-201ENST00000494582 CT45A6P0DMU7 189 aa8.08□□□□□ -1.12
LINC00488-201ENST00000494582 CT45A5P0DMU8 189 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 182.6 ms