RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 IGHV3-21A0A0B4J1V1 117 aa5.26□□□□□ -1.57
MSH5-217ENST00000494458 TRAV5A0A0B4J249 113 aa5.26□□□□□ -1.57
MSH5-217ENST00000494458 KRTAP4-8A0A0G2JLE6 195 aa5.26□□□□□ -1.57
MSH5-217ENST00000494458 CLPSL1A2RUU4 121 aa5.26□□□□□ -1.57
MSH5-217ENST00000494458 SH2D7A6NKC9 451 aaPredicted RBP5.26□□□□□ -1.57
MSH5-217ENST00000494458 B4DEV8 164 aa5.26□□□□□ -1.57
MSH5-217ENST00000494458 C11orf94C9JXX5 98 aa5.26□□□□□ -1.57
MSH5-217ENST00000494458 H3BQ15 152 aa5.26□□□□□ -1.57
MSH5-217ENST00000494458 H3BRN7 92 aa5.26□□□□□ -1.57
MSH5-217ENST00000494458 COX7A2P2O60397 106 aa5.26□□□□□ -1.57
MSH5-217ENST00000494458 OR2J3O76001 311 aa5.26□□□□□ -1.57
MSH5-217ENST00000494458 PSMB8P28062 276 aa5.26□□□□□ -1.57
MSH5-217ENST00000494458 PNRC1Q12796 327 aaPredicted RBP5.26□□□□□ -1.57
MSH5-217ENST00000494458 LY6EQ16553 131 aa5.26□□□□□ -1.57
MSH5-217ENST00000494458 ARL6IP6Q8N6S5 226 aa5.26□□□□□ -1.57
MSH5-217ENST00000494458 Q8WTZ3 238 aa5.26□□□□□ -1.57
MSH5-217ENST00000494458 RNF125Q96EQ8 232 aa5.26□□□□□ -1.57
MSH5-217ENST00000494458 NARS2Q96I59 477 aaKnown RBP5.26□□□□□ -1.57
MSH5-217ENST00000494458 SLC25A39Q9BZJ4 359 aaPredicted RBP5.26□□□□□ -1.57
MSH5-217ENST00000494458 OR51M1Q9H341 326 aa5.26□□□□□ -1.57
MSH5-217ENST00000494458 ZNF702PQ9H963 129 aa5.26□□□□□ -1.57
MSH5-217ENST00000494458 HIGD1AQ9Y241 93 aa5.26□□□□□ -1.57
MSH5-217ENST00000494458 LY96Q9Y6Y9 160 aa5.26□□□□□ -1.57
MSH5-217ENST00000494458 GNG7O60262 68 aa5.25□□□□□ -1.57
MSH5-217ENST00000494458 SCO1O75880 301 aa5.25□□□□□ -1.57
MSH5-217ENST00000494458 CLEC3BP05452 202 aa5.25□□□□□ -1.57
MSH5-217ENST00000494458 IGLC2P0DOY2 106 aa5.25□□□□□ -1.57
MSH5-217ENST00000494458 HIST1H1EP10412 219 aaKnown RBP5.25□□□□□ -1.57
MSH5-217ENST00000494458 ORM2P19652 201 aa5.25□□□□□ -1.57
MSH5-217ENST00000494458 ATP5G3P48201 142 aa5.25□□□□□ -1.57
MSH5-217ENST00000494458 RAB9AP51151 201 aa5.25□□□□□ -1.57
MSH5-217ENST00000494458 RPL15P61313 204 aaKnown RBP5.25□□□□□ -1.57
MSH5-217ENST00000494458 DEFA5Q01523 94 aa5.25□□□□□ -1.57
MSH5-217ENST00000494458 ATP5G2Q06055 141 aa5.25□□□□□ -1.57
MSH5-217ENST00000494458 RHEBQ15382 184 aa5.25□□□□□ -1.57
MSH5-217ENST00000494458 USF2Q15853 346 aaPredicted RBP5.25□□□□□ -1.57
MSH5-217ENST00000494458 ECSCRQ19T08 205 aa5.25□□□□□ -1.57
MSH5-217ENST00000494458 FAM209BQ5JX69 171 aa5.25□□□□□ -1.57
MSH5-217ENST00000494458 ZNF600Q6ZNG1 722 aa5.25□□□□□ -1.57
MSH5-217ENST00000494458 OR5AU1Q8NGC0 362 aa5.25□□□□□ -1.57
MSH5-217ENST00000494458 C2CD4CQ8TF44 421 aa5.25□□□□□ -1.57
MSH5-217ENST00000494458 WIPF2Q8TF74 440 aaPredicted RBP5.25□□□□□ -1.57
MSH5-217ENST00000494458 EEF1AKMT3Q96AZ1 226 aa5.25□□□□□ -1.57
MSH5-217ENST00000494458 TVP23CQ96ET8 276 aa5.25□□□□□ -1.57
MSH5-217ENST00000494458 C17orf77Q96MU5 243 aa5.25□□□□□ -1.57
MSH5-217ENST00000494458 YPEL4Q96NS1 127 aa5.25□□□□□ -1.57
MSH5-217ENST00000494458 UHRF2Q96PU4 802 aa5.25□□□□□ -1.57
MSH5-217ENST00000494458 PAXXQ9BUH6 204 aa5.25□□□□□ -1.57
MSH5-217ENST00000494458 RNF24Q9Y225 148 aa5.25□□□□□ -1.57
MSH5-217ENST00000494458 KLF12Q9Y4X4 402 aa5.25□□□□□ -1.57
MSH5-217ENST00000494458 CCDC168Q8NDH2 2452 aa5.25□□□□□ -1.57
MSH5-217ENST00000494458 C7orf77A4D0Y5 90 aa5.24□□□□□ -1.57
MSH5-217ENST00000494458 ZNF98A6NK75 572 aa5.24□□□□□ -1.57
MSH5-217ENST00000494458 GGTLC3B5MD39 225 aa5.24□□□□□ -1.57
MSH5-217ENST00000494458 C9JCJ5 164 aa5.24□□□□□ -1.57
MSH5-217ENST00000494458 TSPAN4O14817 238 aa5.24□□□□□ -1.57
MSH5-217ENST00000494458 HOXA3O43365 443 aaPredicted RBP5.24□□□□□ -1.57
MSH5-217ENST00000494458 TGOLN2O43493 480 aa5.24□□□□□ -1.57
MSH5-217ENST00000494458 SCGB2A1O75556 95 aa5.24□□□□□ -1.57
MSH5-217ENST00000494458 NDUFB4O95168 129 aa5.24□□□□□ -1.57
MSH5-217ENST00000494458 NBEAP1P0C6P0 100 aa5.24□□□□□ -1.57
MSH5-217ENST00000494458 CRYBB3P26998 211 aa5.24□□□□□ -1.57
MSH5-217ENST00000494458 PDE6HQ13956 83 aa5.24□□□□□ -1.57
MSH5-217ENST00000494458 TMEM241Q24JQ0 296 aa5.24□□□□□ -1.57
MSH5-217ENST00000494458 AWAT1Q58HT5 328 aa5.24□□□□□ -1.57
MSH5-217ENST00000494458 TOMM20LQ6UXN7 152 aa5.24□□□□□ -1.57
MSH5-217ENST00000494458 S100A7AQ86SG5 101 aa5.24□□□□□ -1.57
MSH5-217ENST00000494458 LYPD1Q8N2G4 141 aa5.24□□□□□ -1.57
MSH5-217ENST00000494458 OR1B1Q8NGR6 318 aa5.24□□□□□ -1.57
MSH5-217ENST00000494458 OR4F5Q8NH21 305 aa5.24□□□□□ -1.57
MSH5-217ENST00000494458 RPUSD4Q96CM3 377 aaKnown RBP5.24□□□□□ -1.57
MSH5-217ENST00000494458 NOL4LQ96MY1 436 aaPredicted RBP5.24□□□□□ -1.57
MSH5-217ENST00000494458 OR4F4Q96R69 305 aa5.24□□□□□ -1.57
MSH5-217ENST00000494458 NIPSNAP3BQ9BS92 247 aa5.24□□□□□ -1.57
MSH5-217ENST00000494458 PRSS22Q9GZN4 317 aa5.24□□□□□ -1.57
MSH5-217ENST00000494458 KLK15Q9H2R5 256 aa5.24□□□□□ -1.57
MSH5-217ENST00000494458 PARLQ9H300 379 aa5.24□□□□□ -1.57
MSH5-217ENST00000494458 SERTAD4Q9NUC0 356 aa5.24□□□□□ -1.57
MSH5-217ENST00000494458 NAT8Q9UHE5 227 aa5.24□□□□□ -1.57
MSH5-217ENST00000494458 FLNAP21333 2647 aaKnown RBP5.23□□□□□ -1.57
MSH5-217ENST00000494458 TRBV20OR9-2A0A075B6H5 130 aa5.23□□□□□ -1.57
MSH5-217ENST00000494458 TRBV19A0A075B6N1 114 aa5.23□□□□□ -1.57
MSH5-217ENST00000494458 A0A0G2JLM5 398 aa5.23□□□□□ -1.57
MSH5-217ENST00000494458 TRBV6-1A0A0K0K1D8 114 aa5.23□□□□□ -1.57
MSH5-217ENST00000494458 CXorf65A6NEN9 183 aa5.23□□□□□ -1.57
MSH5-217ENST00000494458 OR2T8A6NH00 312 aa5.23□□□□□ -1.57
MSH5-217ENST00000494458 COLCA2A8K830 154 aa5.23□□□□□ -1.57
MSH5-217ENST00000494458 ZNF727A8MUV8 499 aa5.23□□□□□ -1.57
MSH5-217ENST00000494458 NUPL2O15504 423 aaKnown RBP5.23□□□□□ -1.57
MSH5-217ENST00000494458 BUB3O43684 328 aa5.23□□□□□ -1.57
MSH5-217ENST00000494458 OR7C2O60412 319 aa5.23□□□□□ -1.57
MSH5-217ENST00000494458 ZNF253O75346 499 aa5.23□□□□□ -1.57
MSH5-217ENST00000494458 TRGV3P03979 118 aa5.23□□□□□ -1.57
MSH5-217ENST00000494458 IL4P05112 153 aa5.23□□□□□ -1.57
MSH5-217ENST00000494458 ELANEP08246 267 aa5.23□□□□□ -1.57
MSH5-217ENST00000494458 PYYP10082 97 aa5.23□□□□□ -1.57
MSH5-217ENST00000494458 CD99P14209 185 aa5.23□□□□□ -1.57
MSH5-217ENST00000494458 FOSL1P15407 271 aa5.23□□□□□ -1.57
MSH5-217ENST00000494458 TAS2R60P59551 318 aa5.23□□□□□ -1.57
MSH5-217ENST00000494458 RPL23P62829 140 aaKnown RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms