RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 C11orf94C9JXX5 98 aa3.69□□□□□ -1.82
PTCD3-219ENST00000494323 RTL8CO15255 209 aa3.69□□□□□ -1.82
PTCD3-219ENST00000494323 RBFOX2O43251 390 aaKnown RBP eCLIP3.69□□□□□ -1.82
PTCD3-219ENST00000494323 PGLYRP1O75594 196 aaPredicted RBP3.69□□□□□ -1.82
PTCD3-219ENST00000494323 GIG44P09565 113 aaPredicted RBP3.69□□□□□ -1.82
PTCD3-219ENST00000494323 GNRHRP30968 328 aa3.69□□□□□ -1.82
PTCD3-219ENST00000494323 G6PCP35575 357 aa3.69□□□□□ -1.82
PTCD3-219ENST00000494323 AQP4P55087 323 aa3.69□□□□□ -1.82
PTCD3-219ENST00000494323 PAFAH1B2P68402 229 aa3.69□□□□□ -1.82
PTCD3-219ENST00000494323 CATR1Q13166 79 aa3.69□□□□□ -1.82
PTCD3-219ENST00000494323 POU2AF1Q16633 256 aa3.69□□□□□ -1.82
PTCD3-219ENST00000494323 ZFP69Q49AA0 526 aa3.69□□□□□ -1.82
PTCD3-219ENST00000494323 TOMM20LQ6UXN7 152 aa3.69□□□□□ -1.82
PTCD3-219ENST00000494323 LINC00336Q6ZUF6 198 aa3.69□□□□□ -1.82
PTCD3-219ENST00000494323 Q8NAQ8 132 aa3.69□□□□□ -1.82
PTCD3-219ENST00000494323 OR5H6Q8NGV6 325 aa3.69□□□□□ -1.82
PTCD3-219ENST00000494323 OR10C1Q96KK4 312 aa3.69□□□□□ -1.82
PTCD3-219ENST00000494323 MDFICQ9P1T7 246 aa3.69□□□□□ -1.82
PTCD3-219ENST00000494323 RABAC1Q9UI14 185 aa3.69□□□□□ -1.82
PTCD3-219ENST00000494323 TRAV10A0A0B4J240 114 aa3.68□□□□□ -1.82
PTCD3-219ENST00000494323 KNCNA6PVL3 124 aa3.68□□□□□ -1.82
PTCD3-219ENST00000494323 I3L2K1 104 aa3.68□□□□□ -1.82
PTCD3-219ENST00000494323 K7EQD1 137 aa3.68□□□□□ -1.82
PTCD3-219ENST00000494323 GNG7O60262 68 aa3.68□□□□□ -1.82
PTCD3-219ENST00000494323 SNAPC5O75971 98 aa3.68□□□□□ -1.82
PTCD3-219ENST00000494323 NXPH4O95158 308 aa3.68□□□□□ -1.82
PTCD3-219ENST00000494323 MT-CO2P00403 227 aa3.68□□□□□ -1.82
PTCD3-219ENST00000494323 PMP2P02689 132 aa3.68□□□□□ -1.82
PTCD3-219ENST00000494323 F2RP25116 425 aa3.68□□□□□ -1.82
PTCD3-219ENST00000494323 ERVK-16P61578 105 aa3.68□□□□□ -1.82
PTCD3-219ENST00000494323 MXD1Q05195 221 aa3.68□□□□□ -1.82
PTCD3-219ENST00000494323 C12orf74Q32Q52 190 aa3.68□□□□□ -1.82
PTCD3-219ENST00000494323 Q6ZRG5 221 aa3.68□□□□□ -1.82
PTCD3-219ENST00000494323 HSD17B13Q7Z5P4 300 aaPredicted RBP3.68□□□□□ -1.82
PTCD3-219ENST00000494323 CENPSQ8N2Z9 138 aa3.68□□□□□ -1.82
PTCD3-219ENST00000494323 POM121L12Q8N7R1 296 aa3.68□□□□□ -1.82
PTCD3-219ENST00000494323 DUSP18Q8NEJ0 188 aa3.68□□□□□ -1.82
PTCD3-219ENST00000494323 OR1P1Q8NH06 330 aa3.68□□□□□ -1.82
PTCD3-219ENST00000494323 LGALS14Q8TCE9 139 aa3.68□□□□□ -1.82
PTCD3-219ENST00000494323 LSM10Q969L4 123 aaKnown RBP3.68□□□□□ -1.82
PTCD3-219ENST00000494323 C11orf52Q96A22 123 aa3.68□□□□□ -1.82
PTCD3-219ENST00000494323 PINX1Q96BK5 328 aaKnown RBP3.68□□□□□ -1.82
PTCD3-219ENST00000494323 DGCR14Q96DF8 476 aaKnown RBP3.68□□□□□ -1.82
PTCD3-219ENST00000494323 TMEM56Q96MV1 263 aa3.68□□□□□ -1.82
PTCD3-219ENST00000494323 NXF2Q9GZY0 626 aaKnown RBP3.68□□□□□ -1.82
PTCD3-219ENST00000494323 TMEM231Q9H6L2 316 aa3.68□□□□□ -1.82
PTCD3-219ENST00000494323 RNF167Q9H6Y7 350 aa3.68□□□□□ -1.82
PTCD3-219ENST00000494323 TXNL4BQ9NX01 149 aaKnown RBP3.68□□□□□ -1.82
PTCD3-219ENST00000494323 NDUFB11Q9NX14 153 aa3.68□□□□□ -1.82
PTCD3-219ENST00000494323 RHBDL2Q9NX52 303 aa3.68□□□□□ -1.82
PTCD3-219ENST00000494323 IGLV2-18A0A075B6J9 118 aa3.67□□□□□ -1.82
PTCD3-219ENST00000494323 DEFB131BA0A096LNP1 70 aa3.67□□□□□ -1.82
PTCD3-219ENST00000494323 A0A1B0GU03 582 aa3.67□□□□□ -1.82
PTCD3-219ENST00000494323 TMEM50AO95807 157 aa3.67□□□□□ -1.82
PTCD3-219ENST00000494323 EIF4EP06730 217 aaKnown RBP3.67□□□□□ -1.82
PTCD3-219ENST00000494323 MIFP14174 115 aa3.67□□□□□ -1.82
PTCD3-219ENST00000494323 NPPCP23582 126 aa3.67□□□□□ -1.82
PTCD3-219ENST00000494323 SDC2P34741 201 aa3.67□□□□□ -1.82
PTCD3-219ENST00000494323 MSMO1Q15800 293 aa3.67□□□□□ -1.82
PTCD3-219ENST00000494323 SPINK9Q5DT21 86 aa3.67□□□□□ -1.82
PTCD3-219ENST00000494323 ACTL10Q5JWF8 245 aa3.67□□□□□ -1.82
PTCD3-219ENST00000494323 IDNKQ5T6J7 187 aa3.67□□□□□ -1.82
PTCD3-219ENST00000494323 UBE2UQ5VVX9 321 aa3.67□□□□□ -1.82
PTCD3-219ENST00000494323 PVRIGQ6DKI7 326 aa3.67□□□□□ -1.82
PTCD3-219ENST00000494323 THOC7Q6I9Y2 204 aaKnown RBP3.67□□□□□ -1.82
PTCD3-219ENST00000494323 SFXN4Q6P4A7 337 aa3.67□□□□□ -1.82
PTCD3-219ENST00000494323 TPRA1Q86W33 373 aa3.67□□□□□ -1.82
PTCD3-219ENST00000494323 STXBP6Q8NFX7 210 aa3.67□□□□□ -1.82
PTCD3-219ENST00000494323 CNBD2Q96M20 576 aa3.67□□□□□ -1.82
PTCD3-219ENST00000494323 TXN2Q99757 166 aa3.67□□□□□ -1.82
PTCD3-219ENST00000494323 ZNF2Q9BSG1 426 aaPredicted RBP3.67□□□□□ -1.82
PTCD3-219ENST00000494323 RNF126Q9BV68 326 aa3.67□□□□□ -1.82
PTCD3-219ENST00000494323 VSIRQ9H7M9 311 aa3.67□□□□□ -1.82
PTCD3-219ENST00000494323 AUNIPQ9H7T9 357 aa3.67□□□□□ -1.82
PTCD3-219ENST00000494323 TMEM14BQ9NUH8 114 aa3.67□□□□□ -1.82
PTCD3-219ENST00000494323 FKBP11Q9NYL4 201 aa3.67□□□□□ -1.82
PTCD3-219ENST00000494323 EHFQ9NZC4 300 aa3.67□□□□□ -1.82
PTCD3-219ENST00000494323 COMMD9Q9P000 198 aa3.67□□□□□ -1.82
PTCD3-219ENST00000494323 KLK11Q9UBX7 282 aa3.67□□□□□ -1.82
PTCD3-219ENST00000494323 CACNG5Q9UF02 275 aa3.67□□□□□ -1.82
PTCD3-219ENST00000494323 PRNDQ9UKY0 176 aa3.67□□□□□ -1.82
PTCD3-219ENST00000494323 TBC1D24Q9ULP9 559 aa3.67□□□□□ -1.82
PTCD3-219ENST00000494323 RAB26Q9ULW5 256 aa3.67□□□□□ -1.82
PTCD3-219ENST00000494323 CELA1Q9UNI1 258 aa3.67□□□□□ -1.82
PTCD3-219ENST00000494323 PUS1Q9Y606 427 aaKnown RBP eCLIP3.67□□□□□ -1.82
PTCD3-219ENST00000494323 K7EQG2 157 aa3.66□□□□□ -1.82
PTCD3-219ENST00000494323 SCGNO76038 276 aa3.66□□□□□ -1.82
PTCD3-219ENST00000494323 IFNA21P01568 189 aa3.66□□□□□ -1.82
PTCD3-219ENST00000494323 IFNA17P01571 189 aa3.66□□□□□ -1.82
PTCD3-219ENST00000494323 CD5P06127 495 aa3.66□□□□□ -1.82
PTCD3-219ENST00000494323 ZNF688P0C7X2 276 aa3.66□□□□□ -1.82
PTCD3-219ENST00000494323 P0DMU3 169 aa3.66□□□□□ -1.82
PTCD3-219ENST00000494323 FAM231AP0DMU4 169 aa3.66□□□□□ -1.82
PTCD3-219ENST00000494323 FAM231CP0DMU5 169 aa3.66□□□□□ -1.82
PTCD3-219ENST00000494323 PSMB9P28065 219 aa3.66□□□□□ -1.82
PTCD3-219ENST00000494323 FGF9P31371 208 aaPredicted RBP3.66□□□□□ -1.82
PTCD3-219ENST00000494323 EMP1P54849 157 aa3.66□□□□□ -1.82
PTCD3-219ENST00000494323 CYCSP99999 105 aaKnown RBP3.66□□□□□ -1.82
PTCD3-219ENST00000494323 IZUMO2Q6UXV1 221 aa3.66□□□□□ -1.82
PTCD3-219ENST00000494323 CSNK1G2-AS1Q8NCQ2 148 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms