RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 SPATA31B1PQ5VZV4 182 aa12.12□□□□□ -0.47
PDLIM2-217ENST00000491330 LINC00476Q8WZB0 136 aa12.12□□□□□ -0.47
PDLIM2-217ENST00000491330 TBC1D24Q9ULP9 559 aa12.12□□□□□ -0.47
PDLIM2-217ENST00000491330 TENM2Q9NT68 2774 aa12.12□□□□□ -0.47
PDLIM2-217ENST00000491330 IL5P05113 134 aa12.11□□□□□ -0.47
PDLIM2-217ENST00000491330 EBLN2Q6P2I7 272 aa12.11□□□□□ -0.47
PDLIM2-217ENST00000491330 C2CD4CQ8TF44 421 aa12.11□□□□□ -0.47
PDLIM2-217ENST00000491330 LINC00052Q96N35 136 aa12.11□□□□□ -0.47
PDLIM2-217ENST00000491330 GPR82Q96P67 336 aa12.11□□□□□ -0.47
PDLIM2-217ENST00000491330 MAGT1Q9H0U3 335 aa12.11□□□□□ -0.47
PDLIM2-217ENST00000491330 PSENENQ9NZ42 101 aa12.11□□□□□ -0.47
PDLIM2-217ENST00000491330 PRSS46E5RG02 174 aa12.1□□□□□ -0.47
PDLIM2-217ENST00000491330 PSMB3P49720 205 aa12.1□□□□□ -0.47
PDLIM2-217ENST00000491330 POLR2GP62487 172 aaKnown RBP eCLIP12.1□□□□□ -0.47
PDLIM2-217ENST00000491330 ZNF90Q03938 601 aa12.1□□□□□ -0.47
PDLIM2-217ENST00000491330 OR2F1Q13607 317 aa12.1□□□□□ -0.47
PDLIM2-217ENST00000491330 TMEM144Q7Z5S9 345 aa12.1□□□□□ -0.47
PDLIM2-217ENST00000491330 ZBTB8BQ8NAP8 495 aaPredicted RBP12.1□□□□□ -0.47
PDLIM2-217ENST00000491330 ENKURQ8TC29 256 aa12.1□□□□□ -0.47
PDLIM2-217ENST00000491330 TMEM147Q9BVK8 224 aa12.1□□□□□ -0.47
PDLIM2-217ENST00000491330 GGACTQ9BVM4 153 aa12.1□□□□□ -0.47
PDLIM2-217ENST00000491330 HRH4Q9H3N8 390 aa12.1□□□□□ -0.47
PDLIM2-217ENST00000491330 GPN1Q9HCN4 374 aaPredicted RBP12.1□□□□□ -0.47
PDLIM2-217ENST00000491330 TRAV6A0A075B6T7 132 aa12.09□□□□□ -0.47
PDLIM2-217ENST00000491330 SMCO3A2RU48 225 aa12.09□□□□□ -0.47
PDLIM2-217ENST00000491330 PRAF2O60831 178 aa12.09□□□□□ -0.47
PDLIM2-217ENST00000491330 DEFA1P59665 94 aa12.09□□□□□ -0.47
PDLIM2-217ENST00000491330 DEFA3P59666 94 aa12.09□□□□□ -0.47
PDLIM2-217ENST00000491330 NANOS2P60321 138 aaKnown RBP12.09□□□□□ -0.47
PDLIM2-217ENST00000491330 RAP2BP61225 183 aa12.09□□□□□ -0.47
PDLIM2-217ENST00000491330 SELENOTP62341 195 aa12.09□□□□□ -0.47
PDLIM2-217ENST00000491330 C12orf45Q8N5I9 185 aaPredicted RBP12.09□□□□□ -0.47
PDLIM2-217ENST00000491330 OR10P1Q8NGE3 313 aa12.09□□□□□ -0.47
PDLIM2-217ENST00000491330 IGKV1D-37A0A075B6S9 117 aa12.08□□□□□ -0.48
PDLIM2-217ENST00000491330 ISLRO14498 428 aa12.08□□□□□ -0.48
PDLIM2-217ENST00000491330 SSSCA1O60232 199 aa12.08□□□□□ -0.48
PDLIM2-217ENST00000491330 DLK1P80370 383 aa12.08□□□□□ -0.48
PDLIM2-217ENST00000491330 EWSR1Q01844 656 aaKnown RBP eCLIP12.08□□□□□ -0.48
PDLIM2-217ENST00000491330 TMEM14EPQ6UXP3 125 aa12.08□□□□□ -0.48
PDLIM2-217ENST00000491330 OR1B1Q8NGR6 318 aa12.08□□□□□ -0.48
PDLIM2-217ENST00000491330 RPRMQ9NS64 109 aa12.08□□□□□ -0.48
PDLIM2-217ENST00000491330 H3BMM0 161 aa12.07□□□□□ -0.48
PDLIM2-217ENST00000491330 DEFB4AO15263 64 aa12.07□□□□□ -0.48
PDLIM2-217ENST00000491330 HLA-DRB4P13762 266 aa12.07□□□□□ -0.48
PDLIM2-217ENST00000491330 ORM2P19652 201 aa12.07□□□□□ -0.48
PDLIM2-217ENST00000491330 PVALBP20472 110 aaPredicted RBP12.07□□□□□ -0.48
PDLIM2-217ENST00000491330 FOXI2Q6ZQN5 318 aa12.07□□□□□ -0.48
PDLIM2-217ENST00000491330 C16orf92Q96LL3 132 aa12.07□□□□□ -0.48
PDLIM2-217ENST00000491330 C2orf50Q96LR7 162 aa12.07□□□□□ -0.48
PDLIM2-217ENST00000491330 SLC25A22Q9H936 323 aa12.07□□□□□ -0.48
PDLIM2-217ENST00000491330 NPVFQ9HCQ7 196 aa12.07□□□□□ -0.48
PDLIM2-217ENST00000491330 GSKIPQ9P0R6 139 aa12.07□□□□□ -0.48
PDLIM2-217ENST00000491330 MGAT4CQ9UBM8 478 aa12.07□□□□□ -0.48
PDLIM2-217ENST00000491330 HLA-DRB4X5D2U9 266 aa12.07□□□□□ -0.48
PDLIM2-217ENST00000491330 IGHV4-28A0A0C4DH34 117 aa12.06□□□□□ -0.48
PDLIM2-217ENST00000491330 TMEM189A5PLL7 270 aa12.06□□□□□ -0.48
PDLIM2-217ENST00000491330 SMIM9A6NGZ8 99 aa12.06□□□□□ -0.48
PDLIM2-217ENST00000491330 ZNF705EA8MWA4 302 aaPredicted RBP12.06□□□□□ -0.48
PDLIM2-217ENST00000491330 LGALS9CQ6DKI2 356 aa12.06□□□□□ -0.48
PDLIM2-217ENST00000491330 GSG1LQ6UXU4 331 aa12.06□□□□□ -0.48
PDLIM2-217ENST00000491330 ACOT7LQ6ZUV0 252 aa12.06□□□□□ -0.48
PDLIM2-217ENST00000491330 OR4B1Q8NGF8 309 aa12.06□□□□□ -0.48
PDLIM2-217ENST00000491330 CLEC5AQ9NY25 188 aa12.06□□□□□ -0.48
PDLIM2-217ENST00000491330 XCL2Q9UBD3 114 aa12.06□□□□□ -0.48
PDLIM2-217ENST00000491330 TRAV10A0A0B4J240 114 aa12.05□□□□□ -0.48
PDLIM2-217ENST00000491330 TEX48A0A1B0GUV7 120 aa12.05□□□□□ -0.48
PDLIM2-217ENST00000491330 C5orf51A6NDU8 294 aa12.05□□□□□ -0.48
PDLIM2-217ENST00000491330 PMS2P5A8MQ11 134 aa12.05□□□□□ -0.48
PDLIM2-217ENST00000491330 H3BP45 60 aa12.05□□□□□ -0.48
PDLIM2-217ENST00000491330 K7EPK0 472 aa12.05□□□□□ -0.48
PDLIM2-217ENST00000491330 L7N2F9 121 aa12.05□□□□□ -0.48
PDLIM2-217ENST00000491330 SCGB1D2O95969 90 aa12.05□□□□□ -0.48
PDLIM2-217ENST00000491330 VAMP2P63027 116 aa12.05□□□□□ -0.48
PDLIM2-217ENST00000491330 PXDC1Q5TGL8 231 aa12.05□□□□□ -0.48
PDLIM2-217ENST00000491330 LRRC20Q8TCA0 184 aa12.05□□□□□ -0.48
PDLIM2-217ENST00000491330 RCL1Q9Y2P8 373 aaKnown RBP12.05□□□□□ -0.48
PDLIM2-217ENST00000491330 GOLT1BQ9Y3E0 138 aa12.05□□□□□ -0.48
PDLIM2-217ENST00000491330 IGKV1OR2-108A0A075B7D4 117 aa12.04□□□□□ -0.48
PDLIM2-217ENST00000491330 IGLL5B9A064 214 aa12.04□□□□□ -0.48
PDLIM2-217ENST00000491330 MBPP02686 304 aaPredicted RBP12.04□□□□□ -0.48
PDLIM2-217ENST00000491330 RPL7P18124 248 aaKnown RBP12.04□□□□□ -0.48
PDLIM2-217ENST00000491330 C4BPBP20851 252 aa12.04□□□□□ -0.48
PDLIM2-217ENST00000491330 PAX9P55771 341 aa12.04□□□□□ -0.48
PDLIM2-217ENST00000491330 Q8NAQ8 132 aa12.04□□□□□ -0.48
PDLIM2-217ENST00000491330 CLUHP3Q96NS8 147 aa12.04□□□□□ -0.48
PDLIM2-217ENST00000491330 SEC22CQ9BRL7 303 aa12.04□□□□□ -0.48
PDLIM2-217ENST00000491330 SAV1Q9H4B6 383 aaPredicted RBP12.04□□□□□ -0.48
PDLIM2-217ENST00000491330 C7orf66A4D0T2 115 aa12.03□□□□□ -0.48
PDLIM2-217ENST00000491330 ZNF98A6NK75 572 aa12.03□□□□□ -0.48
PDLIM2-217ENST00000491330 HYPMO75409 117 aa12.03□□□□□ -0.48
PDLIM2-217ENST00000491330 DEDDO75618 318 aa12.03□□□□□ -0.48
PDLIM2-217ENST00000491330 IGKV3-20P01619 116 aa12.03□□□□□ -0.48
PDLIM2-217ENST00000491330 HLA-DMBP28068 263 aa12.03□□□□□ -0.48
PDLIM2-217ENST00000491330 PLP1P60201 277 aa12.03□□□□□ -0.48
PDLIM2-217ENST00000491330 CYCSP99999 105 aaKnown RBP12.03□□□□□ -0.48
PDLIM2-217ENST00000491330 RAB31Q13636 194 aa12.03□□□□□ -0.48
PDLIM2-217ENST00000491330 TEPPQ6URK8 271 aa12.03□□□□□ -0.48
PDLIM2-217ENST00000491330 RSG1Q9BU20 258 aa12.03□□□□□ -0.48
PDLIM2-217ENST00000491330 HIGD1AQ9Y241 93 aa12.03□□□□□ -0.48
PDLIM2-217ENST00000491330 FAM25EA8MYX2 175 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms