RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 C15orf32Q32M92 178 aa14.45□□□□□ -0.1
NPHP4-209ENST00000489180 A0A087X0K7 114 aa14.45□□□□□ -0.1
NPHP4-209ENST00000489180 GUSBP1Q15486 140 aa14.44□□□□□ -0.1
NPHP4-209ENST00000489180 IGHV1-3A0A0C4DH29 117 aa14.44□□□□□ -0.1
NPHP4-209ENST00000489180 C20orf204Q6ZNR8 217 aa14.44□□□□□ -0.1
NPHP4-209ENST00000489180 VMO1Q7Z5L0 202 aa14.44□□□□□ -0.1
NPHP4-209ENST00000489180 C3orf79P0CE67 100 aa14.44□□□□□ -0.1
NPHP4-209ENST00000489180 NDPQ00604 133 aa14.44□□□□□ -0.1
NPHP4-209ENST00000489180 Q6P435 159 aa14.44□□□□□ -0.1
NPHP4-209ENST00000489180 SLC25A48Q6ZT89 311 aaKnown RBP14.44□□□□□ -0.1
NPHP4-209ENST00000489180 TRAV8-1A0A0A6YYK1 113 aa14.43□□□□□ -0.1
NPHP4-209ENST00000489180 MLANAQ16655 118 aa14.43□□□□□ -0.1
NPHP4-209ENST00000489180 TRAV8-4A0A0B4J246 113 aa14.43□□□□□ -0.1
NPHP4-209ENST00000489180 SIGMAR1Q99720 223 aa14.43□□□□□ -0.1
NPHP4-209ENST00000489180 ZNF672Q499Z4 452 aaPredicted RBP14.43□□□□□ -0.1
NPHP4-209ENST00000489180 SEC11AP67812 179 aa14.43□□□□□ -0.1
NPHP4-209ENST00000489180 C3orf36Q3SXR2 165 aa14.43□□□□□ -0.1
NPHP4-209ENST00000489180 Q6ZRM9 215 aa14.43□□□□□ -0.1
NPHP4-209ENST00000489180 ANAPC13Q9BS18 74 aa14.43□□□□□ -0.1
NPHP4-209ENST00000489180 TRAV41A0A0B4J266 112 aa14.42□□□□□ -0.1
NPHP4-209ENST00000489180 E9PLN8 166 aa14.42□□□□□ -0.1
NPHP4-209ENST00000489180 GAGE13Q4V321 117 aa14.42□□□□□ -0.1
NPHP4-209ENST00000489180 MS4A6AQ9H2W1 248 aa14.42□□□□□ -0.1
NPHP4-209ENST00000489180 SH2D1AO60880 128 aa14.42□□□□□ -0.1
NPHP4-209ENST00000489180 CKS1BP61024 79 aa14.42□□□□□ -0.1
NPHP4-209ENST00000489180 C11orf68Q9H3H3 251 aaKnown RBP14.42□□□□□ -0.1
NPHP4-209ENST00000489180 YAE1D1Q9NRH1 226 aa14.42□□□□□ -0.1
NPHP4-209ENST00000489180 PLSCR4Q9NRQ2 329 aa14.42□□□□□ -0.1
NPHP4-209ENST00000489180 DUSP14O95147 198 aaKnown RBP14.42□□□□□ -0.1
NPHP4-209ENST00000489180 BCL6BQ8N143 479 aaPredicted RBP14.42□□□□□ -0.1
NPHP4-209ENST00000489180 SLC25A15Q9Y619 301 aa14.42□□□□□ -0.1
NPHP4-209ENST00000489180 TMEM8BA6NDV4 472 aa14.42□□□□□ -0.1
NPHP4-209ENST00000489180 H0YJW9 148 aa14.42□□□□□ -0.1
NPHP4-209ENST00000489180 ZNF474Q6S9Z5 364 aaPredicted RBP14.41□□□□□ -0.1
NPHP4-209ENST00000489180 SLC25A2Q9BXI2 301 aa14.41□□□□□ -0.1
NPHP4-209ENST00000489180 PRSS22Q9GZN4 317 aa14.41□□□□□ -0.1
NPHP4-209ENST00000489180 C15orf62A8K5M9 175 aa14.41□□□□□ -0.1
NPHP4-209ENST00000489180 SMKR1H3BMG3 65 aa14.41□□□□□ -0.1
NPHP4-209ENST00000489180 OVOL1O14753 267 aa14.41□□□□□ -0.1
NPHP4-209ENST00000489180 ANK1P16157 1881 aa14.41□□□□□ -0.1
NPHP4-209ENST00000489180 A0A1B0GWJ7 208 aa14.41□□□□□ -0.1
NPHP4-209ENST00000489180 CACNA1DQ01668 2161 aa14.41□□□□□ -0.1
NPHP4-209ENST00000489180 TRGV4A0A0C4DH28 118 aa14.41□□□□□ -0.1
NPHP4-209ENST00000489180 A8MWV9 139 aa14.41□□□□□ -0.1
NPHP4-209ENST00000489180 MPV17L2Q567V2 206 aa14.41□□□□□ -0.1
NPHP4-209ENST00000489180 CD59P13987 128 aa14.4□□□□□ -0.1
NPHP4-209ENST00000489180 PLNP26678 52 aa14.4□□□□□ -0.1
NPHP4-209ENST00000489180 TNFRSF14Q92956 283 aa14.4□□□□□ -0.1
NPHP4-209ENST00000489180 HS3ST6Q96QI5 342 aa14.4□□□□□ -0.1
NPHP4-209ENST00000489180 C9JQL5 133 aa14.4□□□□□ -0.1
NPHP4-209ENST00000489180 TMEM178BH3BS89 294 aa14.4□□□□□ -0.1
NPHP4-209ENST00000489180 WNT2P09544 360 aa14.4□□□□□ -0.1
NPHP4-209ENST00000489180 TRIOBPQ9H2D6 2365 aa14.4□□□□□ -0.1
NPHP4-209ENST00000489180 LY6DQ14210 128 aa14.4□□□□□ -0.1
NPHP4-209ENST00000489180 ZNF664Q8N3J9 261 aa14.4□□□□□ -0.1
NPHP4-209ENST00000489180 GAFA1Q96PS6 74 aa14.4□□□□□ -0.1
NPHP4-209ENST00000489180 DOCK6Q96HP0 2047 aa14.4□□□□□ -0.1
NPHP4-209ENST00000489180 TRGV11A0A075B6L2 103 aa14.4□□□□□ -0.1
NPHP4-209ENST00000489180 DLEU1O43261 78 aa14.4□□□□□ -0.1
NPHP4-209ENST00000489180 SRSF4Q08170 494 aaKnown RBP14.4□□□□□ -0.1
NPHP4-209ENST00000489180 TPTE2P1Q5T6R2 138 aa14.4□□□□□ -0.1
NPHP4-209ENST00000489180 LINC00479Q96M42 142 aa14.4□□□□□ -0.1
NPHP4-209ENST00000489180 TRGV9Q99603 122 aa14.4□□□□□ -0.1
NPHP4-209ENST00000489180 MED12Q93074 2177 aa14.4□□□□□ -0.11
NPHP4-209ENST00000489180 LYL1P12980 280 aa14.39□□□□□ -0.11
NPHP4-209ENST00000489180 FHL1Q13642 323 aa14.39□□□□□ -0.11
NPHP4-209ENST00000489180 FAM90A2PQ658T7 463 aa14.39□□□□□ -0.11
NPHP4-209ENST00000489180 IGKV1D-17A0A075B6S4 117 aa14.39□□□□□ -0.11
NPHP4-209ENST00000489180 ERG28Q9UKR5 140 aa14.38□□□□□ -0.11
NPHP4-209ENST00000489180 SCN5AQ14524 2016 aa14.38□□□□□ -0.11
NPHP4-209ENST00000489180 PRTN3P24158 256 aa14.38□□□□□ -0.11
NPHP4-209ENST00000489180 MST1LQ2TV78 715 aa14.38□□□□□ -0.11
NPHP4-209ENST00000489180 TMEM249Q2WGJ8 235 aa14.38□□□□□ -0.11
NPHP4-209ENST00000489180 OR9G4Q8NGQ1 327 aa14.38□□□□□ -0.11
NPHP4-209ENST00000489180 M0R2P5 195 aa14.38□□□□□ -0.11
NPHP4-209ENST00000489180 XIRP1Q702N8 1843 aaKnown RBP14.38□□□□□ -0.11
NPHP4-209ENST00000489180 A0A1B0GUS0 222 aa14.37□□□□□ -0.11
NPHP4-209ENST00000489180 ADARB2-AS1A8MUL3 147 aa14.37□□□□□ -0.11
NPHP4-209ENST00000489180 PSG3Q16557 428 aa14.37□□□□□ -0.11
NPHP4-209ENST00000489180 ZNF329Q86UD4 541 aa14.37□□□□□ -0.11
NPHP4-209ENST00000489180 CHCHD5Q9BSY4 110 aa14.37□□□□□ -0.11
NPHP4-209ENST00000489180 C17orf82Q86X59 251 aaPredicted RBP14.37□□□□□ -0.11
NPHP4-209ENST00000489180 B3GALT5-AS1P59052 145 aa14.37□□□□□ -0.11
NPHP4-209ENST00000489180 ZNRD1Q9P1U0 126 aa14.37□□□□□ -0.11
NPHP4-209ENST00000489180 SYS1-DBNDD2H3BUS1 97 aa14.37□□□□□ -0.11
NPHP4-209ENST00000489180 LINC00158P58513 81 aa14.37□□□□□ -0.11
NPHP4-209ENST00000489180 SPSB3Q6PJ21 355 aa14.37□□□□□ -0.11
NPHP4-209ENST00000489180 RASL11AQ6T310 242 aa14.37□□□□□ -0.11
NPHP4-209ENST00000489180 SMPXQ9UHP9 88 aa14.37□□□□□ -0.11
NPHP4-209ENST00000489180 ZNF876PQ49A33 203 aa14.37□□□□□ -0.11
NPHP4-209ENST00000489180 TMEM155Q4W5P6 130 aa14.37□□□□□ -0.11
NPHP4-209ENST00000489180 TRBV6-6A0A0A6YYG2 114 aa14.36□□□□□ -0.11
NPHP4-209ENST00000489180 NSUN5P1Q3KNT7 163 aa14.36□□□□□ -0.11
NPHP4-209ENST00000489180 SPACA3Q8IXA5 215 aa14.36□□□□□ -0.11
NPHP4-209ENST00000489180 CACNA1EQ15878 2313 aa14.36□□□□□ -0.11
NPHP4-209ENST00000489180 SRSF6Q13247 344 aaKnown RBP14.36□□□□□ -0.11
NPHP4-209ENST00000489180 BRD3OSQ6XYD6 125 aa14.36□□□□□ -0.11
NPHP4-209ENST00000489180 SRRM4A7MD48 611 aaKnown RBP14.36□□□□□ -0.11
NPHP4-209ENST00000489180 LYPD2Q6UXB3 125 aa14.36□□□□□ -0.11
NPHP4-209ENST00000489180 SPAG8Q99932 426 aaPredicted RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms