RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 TRGC2P03986 189 aa1.12□□□□□ -2.23
RFC4-213ENST00000489028 HLA-EP13747 358 aa1.12□□□□□ -2.23
RFC4-213ENST00000489028 GLRXP35754 106 aa1.12□□□□□ -2.23
RFC4-213ENST00000489028 SSR2P43308 183 aa1.12□□□□□ -2.23
RFC4-213ENST00000489028 DYNLT3P51808 116 aa1.12□□□□□ -2.23
RFC4-213ENST00000489028 TFAMQ00059 246 aaKnown RBP1.12□□□□□ -2.23
RFC4-213ENST00000489028 RNASE10Q5GAN6 216 aaKnown RBP1.12□□□□□ -2.23
RFC4-213ENST00000489028 SOSTDC1Q6X4U4 206 aa1.12□□□□□ -2.23
RFC4-213ENST00000489028 DEFB119Q8N690 84 aa1.12□□□□□ -2.23
RFC4-213ENST00000489028 LINC00301Q8NCQ3 95 aa1.12□□□□□ -2.23
RFC4-213ENST00000489028 PPTC7Q8NI37 304 aa1.12□□□□□ -2.23
RFC4-213ENST00000489028 SFT2D1Q8WV19 159 aa1.12□□□□□ -2.23
RFC4-213ENST00000489028 DYDC1Q8WWB3 177 aa1.12□□□□□ -2.23
RFC4-213ENST00000489028 ANP32BQ92688 251 aaKnown RBP1.12□□□□□ -2.23
RFC4-213ENST00000489028 SLC25A21Q9BQT8 299 aaPredicted RBP1.12□□□□□ -2.23
RFC4-213ENST00000489028 ADAT1Q9BUB4 502 aaKnown RBP1.12□□□□□ -2.23
RFC4-213ENST00000489028 RTL8AQ9BWD3 113 aa1.12□□□□□ -2.23
RFC4-213ENST00000489028 CYSTM1Q9H1C7 97 aa1.12□□□□□ -2.23
RFC4-213ENST00000489028 MED9Q9NWA0 146 aa1.12□□□□□ -2.23
RFC4-213ENST00000489028 SMPXQ9UHP9 88 aa1.12□□□□□ -2.23
RFC4-213ENST00000489028 ECM29Q5VYK3 1845 aa1.12□□□□□ -2.23
RFC4-213ENST00000489028 BRWD1Q9NSI6 2320 aa1.11□□□□□ -2.23
RFC4-213ENST00000489028 PLXND1Q9Y4D7 1925 aa1.11□□□□□ -2.23
RFC4-213ENST00000489028 TRAV3A0A0B4J244 114 aa1.11□□□□□ -2.23
RFC4-213ENST00000489028 C2orf70A6NJV1 201 aa1.11□□□□□ -2.23
RFC4-213ENST00000489028 MRPS14O60783 128 aaKnown RBP1.11□□□□□ -2.23
RFC4-213ENST00000489028 CSN2P05814 226 aa1.11□□□□□ -2.23
RFC4-213ENST00000489028 RAB4BP61018 213 aa1.11□□□□□ -2.23
RFC4-213ENST00000489028 PDE6HQ13956 83 aa1.11□□□□□ -2.23
RFC4-213ENST00000489028 C10orf55Q5SWW7 151 aa1.11□□□□□ -2.23
RFC4-213ENST00000489028 TMEM78Q5T7P6 136 aa1.11□□□□□ -2.23
RFC4-213ENST00000489028 C3orf56Q8N813 242 aa1.11□□□□□ -2.23
RFC4-213ENST00000489028 GPX7Q96SL4 187 aaPredicted RBP1.11□□□□□ -2.23
RFC4-213ENST00000489028 DDA1Q9BW61 102 aa1.11□□□□□ -2.23
RFC4-213ENST00000489028 POPDC3Q9HBV1 291 aa1.11□□□□□ -2.23
RFC4-213ENST00000489028 MED11Q9P086 117 aa1.11□□□□□ -2.23
RFC4-213ENST00000489028 LY96Q9Y6Y9 160 aa1.11□□□□□ -2.23
RFC4-213ENST00000489028 GBF1Q92538 1859 aa1.11□□□□□ -2.23
RFC4-213ENST00000489028 HELZ2Q9BYK8 2649 aaKnown RBP1.11□□□□□ -2.23
RFC4-213ENST00000489028 RIMBP3CA6NJZ7 1639 aa1.11□□□□□ -2.23
RFC4-213ENST00000489028 RIMBP3BA6NNM3 1639 aa1.11□□□□□ -2.23
RFC4-213ENST00000489028 RIMBP3Q9UFD9 1639 aa1.11□□□□□ -2.23
RFC4-213ENST00000489028 FREM1Q5H8C1 2179 aa1.1□□□□□ -2.23
RFC4-213ENST00000489028 CCDC88AQ3V6T2 1871 aa1.1□□□□□ -2.23
RFC4-213ENST00000489028 TRAV12-1A0A0B4J245 112 aa1.1□□□□□ -2.23
RFC4-213ENST00000489028 TRAV5A0A0B4J249 113 aa1.1□□□□□ -2.23
RFC4-213ENST00000489028 E7EQ34 232 aa1.1□□□□□ -2.23
RFC4-213ENST00000489028 H0YJX3 145 aa1.1□□□□□ -2.23
RFC4-213ENST00000489028 LYZL6O75951 148 aa1.1□□□□□ -2.23
RFC4-213ENST00000489028 IFNA4P05014 189 aa1.1□□□□□ -2.23
RFC4-213ENST00000489028 PLCXD2Q0VAA5 305 aa1.1□□□□□ -2.23
RFC4-213ENST00000489028 CDK5R1Q15078 307 aa1.1□□□□□ -2.23
RFC4-213ENST00000489028 LTC4SQ16873 150 aa1.1□□□□□ -2.23
RFC4-213ENST00000489028 C1orf140Q5VVS0 124 aa1.1□□□□□ -2.23
RFC4-213ENST00000489028 OR2T35Q8NGX2 323 aa1.1□□□□□ -2.23
RFC4-213ENST00000489028 OR10K1Q8NGX5 313 aa1.1□□□□□ -2.23
RFC4-213ENST00000489028 OR4C6Q8NH72 309 aa1.1□□□□□ -2.23
RFC4-213ENST00000489028 TMEM254Q8TBM7 123 aa1.1□□□□□ -2.23
RFC4-213ENST00000489028 C4orf3Q8WVX3 66 aa1.1□□□□□ -2.23
RFC4-213ENST00000489028 ISOC1Q96CN7 298 aa1.1□□□□□ -2.23
RFC4-213ENST00000489028 ZNF714Q96N38 554 aa1.1□□□□□ -2.23
RFC4-213ENST00000489028 CCDC32Q9BV29 185 aa1.1□□□□□ -2.23
RFC4-213ENST00000489028 SNURFQ9Y675 71 aa1.1□□□□□ -2.23
RFC4-213ENST00000489028 RP1P56715 2156 aa1.1□□□□□ -2.23
RFC4-213ENST00000489028 IGKV3D-7A0A0C4DH55 119 aa1.09□□□□□ -2.23
RFC4-213ENST00000489028 IGKV3OR2-268A0A0C4DH90 116 aa1.09□□□□□ -2.23
RFC4-213ENST00000489028 IGKV2-29A2NJV5 120 aaPredicted RBP1.09□□□□□ -2.23
RFC4-213ENST00000489028 C17orf112F2Z3M2 114 aa1.09□□□□□ -2.23
RFC4-213ENST00000489028 H3BQV1 296 aa1.09□□□□□ -2.23
RFC4-213ENST00000489028 HYPMO75409 117 aa1.09□□□□□ -2.23
RFC4-213ENST00000489028 CST7O76096 145 aa1.09□□□□□ -2.23
RFC4-213ENST00000489028 DHFRP00374 187 aa1.09□□□□□ -2.23
RFC4-213ENST00000489028 IL9P15248 144 aa1.09□□□□□ -2.23
RFC4-213ENST00000489028 INSL3P51460 131 aa1.09□□□□□ -2.23
RFC4-213ENST00000489028 TMBIM6P55061 237 aa1.09□□□□□ -2.23
RFC4-213ENST00000489028 RTL8BQ17RB0 113 aa1.09□□□□□ -2.23
RFC4-213ENST00000489028 FKBP1CQ5VVH2 108 aa1.09□□□□□ -2.23
RFC4-213ENST00000489028 OR5D16Q8NGK9 328 aa1.09□□□□□ -2.23
RFC4-213ENST00000489028 ZNF418Q8TF45 676 aaPredicted RBP1.09□□□□□ -2.23
RFC4-213ENST00000489028 REG4Q9BYZ8 158 aa1.09□□□□□ -2.23
RFC4-213ENST00000489028 RASL12Q9NYN1 266 aa1.09□□□□□ -2.23
RFC4-213ENST00000489028 OR52A1Q9UKL2 312 aa1.09□□□□□ -2.23
RFC4-213ENST00000489028 LAMTOR2Q9Y2Q5 125 aa1.09□□□□□ -2.23
RFC4-213ENST00000489028 NUBP2Q9Y5Y2 271 aa1.09□□□□□ -2.23
RFC4-213ENST00000489028 SOX21Q9Y651 276 aaPredicted RBP1.09□□□□□ -2.23
RFC4-213ENST00000489028 CAMSAP2Q08AD1 1489 aa1.09□□□□□ -2.24
RFC4-213ENST00000489028 BAZ2BQ9UIF8 2168 aaKnown RBP1.08□□□□□ -2.24
RFC4-213ENST00000489028 SDK1Q7Z5N4 2213 aa1.08□□□□□ -2.24
RFC4-213ENST00000489028 NCAPD3P42695 1498 aa1.08□□□□□ -2.24
RFC4-213ENST00000489028 GNG14A0A1W2PPG7 69 aa1.08□□□□□ -2.24
RFC4-213ENST00000489028 A0A1W2PRE2 83 aa1.08□□□□□ -2.24
RFC4-213ENST00000489028 HIST1H2BKO60814 126 aa1.08□□□□□ -2.24
RFC4-213ENST00000489028 FAM107AO95990 144 aa1.08□□□□□ -2.24
RFC4-213ENST00000489028 HIST1H2BJP06899 126 aa1.08□□□□□ -2.24
RFC4-213ENST00000489028 OR10J4P0C629 311 aa1.08□□□□□ -2.24
RFC4-213ENST00000489028 RNASE3P12724 160 aaKnown RBP1.08□□□□□ -2.24
RFC4-213ENST00000489028 KRTAP21-3Q3LHN1 58 aa1.08□□□□□ -2.24
RFC4-213ENST00000489028 C2orf82Q6UX34 121 aa1.08□□□□□ -2.24
RFC4-213ENST00000489028 UNQ6190/PRO20217Q6UXQ8 127 aa1.08□□□□□ -2.24
RFC4-213ENST00000489028 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms