RNA–Protein interactions for RNA: ENST00000487939.1

PTEN-204, Transcript of phosphatase and tensin homolog, humanhuman

TSL 3

Gene PTEN, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTEN-204ENST00000487939 STAG3L4Q8TBR4 150 aa0.34□□□□□ -2.36
PTEN-204ENST00000487939 TVP23BQ9NYZ1 205 aa0.34□□□□□ -2.36
PTEN-204ENST00000487939 GLTPQ9NZD2 209 aa0.34□□□□□ -2.36
PTEN-204ENST00000487939 CHCHD2Q9Y6H1 151 aaPredicted RBP0.34□□□□□ -2.36
PTEN-204ENST00000487939 MYLKQ15746 1914 aa0.34□□□□□ -2.36
PTEN-204ENST00000487939 TCRBV4S1A1TA0A5B7 111 aa0.33□□□□□ -2.36
PTEN-204ENST00000487939 TLCD2A6NGC4 264 aa0.33□□□□□ -2.36
PTEN-204ENST00000487939 PIGPP57054 158 aa0.33□□□□□ -2.36
PTEN-204ENST00000487939 MYL6P60660 151 aa0.33□□□□□ -2.36
PTEN-204ENST00000487939 KRR1Q13601 381 aaKnown RBP0.33□□□□□ -2.36
PTEN-204ENST00000487939 TMEM97Q5BJF2 176 aa0.33□□□□□ -2.36
PTEN-204ENST00000487939 LYRM7Q5U5X0 104 aa0.33□□□□□ -2.36
PTEN-204ENST00000487939 PARVGQ9HBI0 331 aa0.33□□□□□ -2.36
PTEN-204ENST00000487939 NIT2Q9NQR4 276 aa0.33□□□□□ -2.36
PTEN-204ENST00000487939 NUP98P52948 1817 aa0.33□□□□□ -2.36
PTEN-204ENST00000487939 FSIP2Q5CZC0 6907 aa0.33□□□□□ -2.36
PTEN-204ENST00000487939 ZGRF1Q86YA3 2104 aa0.32□□□□□ -2.36
PTEN-204ENST00000487939 TNS3Q68CZ2 1445 aa0.32□□□□□ -2.36
PTEN-204ENST00000487939 NAV3Q8IVL0 2385 aa0.32□□□□□ -2.36
PTEN-204ENST00000487939 ZDBF2Q9HCK1 2354 aa0.32□□□□□ -2.36
PTEN-204ENST00000487939 IGHV1-58A0A0C4DH39 117 aa0.32□□□□□ -2.36
PTEN-204ENST00000487939 TMEM114B3SHH9 223 aa0.32□□□□□ -2.36
PTEN-204ENST00000487939 NDUFB3O43676 98 aa0.32□□□□□ -2.36
PTEN-204ENST00000487939 NUPR1O60356 82 aa0.32□□□□□ -2.36
PTEN-204ENST00000487939 PRH1P02810 166 aa0.32□□□□□ -2.36
PTEN-204ENST00000487939 ERP29P30040 261 aaKnown RBP0.32□□□□□ -2.36
PTEN-204ENST00000487939 HIST1H3AP68431 136 aa0.32□□□□□ -2.36
PTEN-204ENST00000487939 H3F3AP84243 136 aa0.32□□□□□ -2.36
PTEN-204ENST00000487939 PDZD9Q8IXQ8 264 aa0.32□□□□□ -2.36
PTEN-204ENST00000487939 OR5D14Q8NGL3 314 aa0.32□□□□□ -2.36
PTEN-204ENST00000487939 LINC00052Q96N35 136 aa0.32□□□□□ -2.36
PTEN-204ENST00000487939 GPER1Q99527 375 aa0.32□□□□□ -2.36
PTEN-204ENST00000487939 SMR3AQ99954 134 aa0.32□□□□□ -2.36
PTEN-204ENST00000487939 TMEM133Q9H2Q1 129 aa0.32□□□□□ -2.36
PTEN-204ENST00000487939 ORMDL1Q9P0S3 153 aa0.32□□□□□ -2.36
PTEN-204ENST00000487939 PCTPQ9UKL6 214 aa0.32□□□□□ -2.36
PTEN-204ENST00000487939 PLB1Q6P1J6 1458 aa0.32□□□□□ -2.36
PTEN-204ENST00000487939 TET1Q8NFU7 2136 aa0.32□□□□□ -2.36
PTEN-204ENST00000487939 APCP25054 2843 aa0.32□□□□□ -2.36
PTEN-204ENST00000487939 MGAMO43451 1857 aa0.31□□□□□ -2.36
PTEN-204ENST00000487939 TRAV4A0A0B4J268 109 aa0.31□□□□□ -2.36
PTEN-204ENST00000487939 CST8O60676 142 aa0.31□□□□□ -2.36
PTEN-204ENST00000487939 CDKN2CP42773 168 aa0.31□□□□□ -2.36
PTEN-204ENST00000487939 C2orf82Q6UX34 121 aa0.31□□□□□ -2.36
PTEN-204ENST00000487939 LINC00575Q6W349 94 aa0.31□□□□□ -2.36
PTEN-204ENST00000487939 SIGMAR1Q99720 223 aa0.31□□□□□ -2.36
PTEN-204ENST00000487939 PSTPIP2Q9H939 334 aa0.31□□□□□ -2.36
PTEN-204ENST00000487939 RNF122Q9H9V4 155 aa0.31□□□□□ -2.36
PTEN-204ENST00000487939 UBR2Q8IWV8 1755 aa0.31□□□□□ -2.36
PTEN-204ENST00000487939 CECR2Q9BXF3 1484 aa0.3□□□□□ -2.36
PTEN-204ENST00000487939 IGLV3-32A0A0A0MS00 114 aa0.3□□□□□ -2.36
PTEN-204ENST00000487939 TRGV10A0A0A0MS01 117 aa0.3□□□□□ -2.36
PTEN-204ENST00000487939 TRAV10A0A0B4J240 114 aa0.3□□□□□ -2.36
PTEN-204ENST00000487939 B4DSR2 109 aa0.3□□□□□ -2.36
PTEN-204ENST00000487939 HAND1O96004 215 aa0.3□□□□□ -2.36
PTEN-204ENST00000487939 HOXA6P31267 233 aa0.3□□□□□ -2.36
PTEN-204ENST00000487939 ATP5G3P48201 142 aa0.3□□□□□ -2.36
PTEN-204ENST00000487939 C4orf22Q6V702 233 aa0.3□□□□□ -2.36
PTEN-204ENST00000487939 OR11H6Q8NGC7 330 aa0.3□□□□□ -2.36
PTEN-204ENST00000487939 OR10K1Q8NGX5 313 aa0.3□□□□□ -2.36
PTEN-204ENST00000487939 TP53RKQ96S44 253 aa0.3□□□□□ -2.36
PTEN-204ENST00000487939 PRRT1Q99946 306 aa0.3□□□□□ -2.36
PTEN-204ENST00000487939 SLC25A21Q9BQT8 299 aaPredicted RBP0.3□□□□□ -2.36
PTEN-204ENST00000487939 LINC00467Q9BRT7 94 aa0.3□□□□□ -2.36
PTEN-204ENST00000487939 KIFC1Q9BW19 673 aa0.3□□□□□ -2.36
PTEN-204ENST00000487939 TMEM126AQ9H061 195 aa0.3□□□□□ -2.36
PTEN-204ENST00000487939 NAV2Q8IVL1 2488 aa0.3□□□□□ -2.36
PTEN-204ENST00000487939 ASH1LQ9NR48 2969 aaKnown RBP0.3□□□□□ -2.36
PTEN-204ENST00000487939 KDM6AO15550 1401 aaPredicted RBP0.3□□□□□ -2.36
PTEN-204ENST00000487939 FMN1Q68DA7 1419 aa0.3□□□□□ -2.36
PTEN-204ENST00000487939 N4BP2Q86UW6 1770 aaPredicted RBP0.29□□□□□ -2.36
PTEN-204ENST00000487939 PCF11O94913 1555 aaKnown RBP0.29□□□□□ -2.36
PTEN-204ENST00000487939 H3BRM9 83 aa0.29□□□□□ -2.36
PTEN-204ENST00000487939 HMGB3O15347 200 aaKnown RBP0.29□□□□□ -2.36
PTEN-204ENST00000487939 IGLV3-1P01715 115 aa0.29□□□□□ -2.36
PTEN-204ENST00000487939 ROMO1P60602 79 aa0.29□□□□□ -2.36
PTEN-204ENST00000487939 RRN3P1Q2M238 152 aa0.29□□□□□ -2.36
PTEN-204ENST00000487939 LIN52Q52LA3 116 aa0.29□□□□□ -2.36
PTEN-204ENST00000487939 SPINK9Q5DT21 86 aa0.29□□□□□ -2.36
PTEN-204ENST00000487939 BCL2L15Q5TBC7 163 aa0.29□□□□□ -2.36
PTEN-204ENST00000487939 C22orf39Q6P5X5 142 aa0.29□□□□□ -2.36
PTEN-204ENST00000487939 HAGHLQ6PII5 290 aaPredicted RBP0.29□□□□□ -2.36
PTEN-204ENST00000487939 ZNF833PQ6ZTB9 187 aa0.29□□□□□ -2.36
PTEN-204ENST00000487939 Q8TAT8 98 aa0.29□□□□□ -2.36
PTEN-204ENST00000487939 GNPDA2Q8TDQ7 276 aa0.29□□□□□ -2.36
PTEN-204ENST00000487939 GGACTQ9BVM4 153 aa0.29□□□□□ -2.36
PTEN-204ENST00000487939 ENY2Q9NPA8 101 aa0.29□□□□□ -2.36
PTEN-204ENST00000487939 TMEM138Q9NPI0 162 aa0.29□□□□□ -2.36
PTEN-204ENST00000487939 TNFSF18Q9UNG2 199 aa0.29□□□□□ -2.36
PTEN-204ENST00000487939 FAM32AQ9Y421 112 aaKnown RBP0.29□□□□□ -2.36
PTEN-204ENST00000487939 MACF1Q9UPN3 7388 aaKnown RBP0.29□□□□□ -2.36
PTEN-204ENST00000487939 SPTBP11277 2137 aa0.29□□□□□ -2.36
PTEN-204ENST00000487939 F8W1H4 67 aa0.28□□□□□ -2.36
PTEN-204ENST00000487939 TMEM256-PLSCR3K7ERE1 68 aa0.28□□□□□ -2.36
PTEN-204ENST00000487939 TAX1BP3O14907 124 aa0.28□□□□□ -2.36
PTEN-204ENST00000487939 ERC2-IT1O76042 136 aa0.28□□□□□ -2.36
PTEN-204ENST00000487939 OR7C1O76099 320 aaPredicted RBP0.28□□□□□ -2.36
PTEN-204ENST00000487939 UBE2BP63146 152 aa0.28□□□□□ -2.36
PTEN-204ENST00000487939 SPA17Q15506 151 aa0.28□□□□□ -2.36
PTEN-204ENST00000487939 KRTAP26-1Q6PEX3 210 aa0.28□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms