RNA–Protein interactions for RNA: ENST00000487647.5

FGFR1-222, Transcript of fibroblast growth factor receptor 1, human

TSL 1 (best)

Gene FGFR1, Length 1,608 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-222	ENST00000487647	ZAN	Q9Y493	2812 aa		11.44	□□□□□ -0.58
FGFR1-222	ENST00000487647		H3BQ15	152 aa		11.44	□□□□□ -0.58
FGFR1-222	ENST00000487647	TGOLN2	O43493	480 aa		11.44	□□□□□ -0.58
FGFR1-222	ENST00000487647	IGHV3-23	P01764	117 aa		11.44	□□□□□ -0.58
FGFR1-222	ENST00000487647	GPR183	P32249	361 aa		11.44	□□□□□ -0.58
FGFR1-222	ENST00000487647	TPPP2	P59282	170 aa		11.44	□□□□□ -0.58
FGFR1-222	ENST00000487647	ATRAID	Q6UW56	229 aa		11.44	□□□□□ -0.58
FGFR1-222	ENST00000487647	FXYD5	Q96DB9	178 aa		11.44	□□□□□ -0.58
FGFR1-222	ENST00000487647	TVP23C	Q96ET8	276 aa		11.44	□□□□□ -0.58
FGFR1-222	ENST00000487647	CCDC140	Q96MF4	163 aa		11.44	□□□□□ -0.58
FGFR1-222	ENST00000487647	TCEAL7	Q9BRU2	100 aa		11.44	□□□□□ -0.58
FGFR1-222	ENST00000487647	CHRDL1	Q9BU40	450 aa		11.44	□□□□□ -0.58
FGFR1-222	ENST00000487647	YTHDF2	Q9Y5A9	579 aa	Known RBP	11.44	□□□□□ -0.58
FGFR1-222	ENST00000487647	HECTD1	Q9ULT8	2610 aa		11.44	□□□□□ -0.58
FGFR1-222	ENST00000487647	ZNF727	A8MUV8	499 aa		11.43	□□□□□ -0.58
FGFR1-222	ENST00000487647		H3BRN7	92 aa		11.43	□□□□□ -0.58
FGFR1-222	ENST00000487647	BMPR1B	O00238	502 aa		11.43	□□□□□ -0.58
FGFR1-222	ENST00000487647	IGHG4	P01861	327 aa		11.43	□□□□□ -0.58
FGFR1-222	ENST00000487647	OR10J4	P0C629	311 aa		11.43	□□□□□ -0.58
FGFR1-222	ENST00000487647	ATP5G3	P48201	142 aa		11.43	□□□□□ -0.58
FGFR1-222	ENST00000487647	RHEB	Q15382	184 aa		11.43	□□□□□ -0.58
FGFR1-222	ENST00000487647	CLEC19A	Q6UXS0	136 aa		11.43	□□□□□ -0.58
FGFR1-222	ENST00000487647		Q8N2B8	174 aa		11.43	□□□□□ -0.58
FGFR1-222	ENST00000487647	PUS1	Q9Y606	427 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
FGFR1-222	ENST00000487647		M0R036	132 aa		11.42	□□□□□ -0.58
FGFR1-222	ENST00000487647	SCO1	O75880	301 aa		11.42	□□□□□ -0.58
FGFR1-222	ENST00000487647	PF4V1	P10720	104 aa		11.42	□□□□□ -0.58
FGFR1-222	ENST00000487647	RAB9A	P51151	201 aa		11.42	□□□□□ -0.58
FGFR1-222	ENST00000487647	SLC35B1	P78383	322 aa		11.42	□□□□□ -0.58
FGFR1-222	ENST00000487647	ZNF343	Q6P1L6	599 aa		11.42	□□□□□ -0.58
FGFR1-222	ENST00000487647	BPIFA4P	Q86YQ2	179 aa		11.42	□□□□□ -0.58
FGFR1-222	ENST00000487647	C11orf52	Q96A22	123 aa		11.42	□□□□□ -0.58
FGFR1-222	ENST00000487647	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	11.42	□□□□□ -0.58
FGFR1-222	ENST00000487647		B4DEV8	164 aa		11.42	□□□□□ -0.58
FGFR1-222	ENST00000487647	NBEAP1	P0C6P0	100 aa		11.42	□□□□□ -0.58
FGFR1-222	ENST00000487647	HIST1H1E	P10412	219 aa	Known RBP	11.42	□□□□□ -0.58
FGFR1-222	ENST00000487647	GP9	P14770	177 aa		11.42	□□□□□ -0.58
FGFR1-222	ENST00000487647	USF2	Q15853	346 aa	Predicted RBP	11.42	□□□□□ -0.58
FGFR1-222	ENST00000487647	TMEM241	Q24JQ0	296 aa		11.42	□□□□□ -0.58
FGFR1-222	ENST00000487647	RPUSD4	Q96CM3	377 aa	Known RBP	11.42	□□□□□ -0.58
FGFR1-222	ENST00000487647	SMIM7	Q9BQ49	75 aa		11.42	□□□□□ -0.58
FGFR1-222	ENST00000487647	PARL	Q9H300	379 aa		11.42	□□□□□ -0.58
FGFR1-222	ENST00000487647	ZNF702P	Q9H963	129 aa		11.42	□□□□□ -0.58
FGFR1-222	ENST00000487647	NAT8	Q9UHE5	227 aa		11.42	□□□□□ -0.58
FGFR1-222	ENST00000487647	RABAC1	Q9UI14	185 aa		11.42	□□□□□ -0.58
FGFR1-222	ENST00000487647	TEX15	Q9BXT5	2789 aa		11.41	□□□□□ -0.58
FGFR1-222	ENST00000487647	CLDN34	H7C241	214 aa		11.41	□□□□□ -0.58
FGFR1-222	ENST00000487647	PYY	P10082	97 aa		11.41	□□□□□ -0.58
FGFR1-222	ENST00000487647	AWAT1	Q58HT5	328 aa		11.41	□□□□□ -0.58
FGFR1-222	ENST00000487647	IL17REL	Q6ZVW7	336 aa		11.41	□□□□□ -0.58
FGFR1-222	ENST00000487647	SDF2L1	Q9HCN8	221 aa		11.41	□□□□□ -0.58
FGFR1-222	ENST00000487647	FLNA	P21333	2647 aa	Known RBP	11.4	□□□□□ -0.58
FGFR1-222	ENST00000487647	C7orf77	A4D0Y5	90 aa		11.4	□□□□□ -0.58
FGFR1-222	ENST00000487647	ZNF98	A6NK75	572 aa		11.4	□□□□□ -0.58
FGFR1-222	ENST00000487647	ELANE	P08246	267 aa		11.4	□□□□□ -0.58
FGFR1-222	ENST00000487647	PSMB8	P28062	276 aa		11.4	□□□□□ -0.58
FGFR1-222	ENST00000487647	BTN1A1	Q13410	526 aa		11.4	□□□□□ -0.58
FGFR1-222	ENST00000487647	KIAA0141	Q14154	515 aa	Predicted RBP	11.4	□□□□□ -0.58
FGFR1-222	ENST00000487647	TEX38	Q6PEX7	206 aa		11.4	□□□□□ -0.58
FGFR1-222	ENST00000487647	TOMM20L	Q6UXN7	152 aa		11.4	□□□□□ -0.58
FGFR1-222	ENST00000487647	GNB4	Q9HAV0	340 aa		11.4	□□□□□ -0.58
FGFR1-222	ENST00000487647	PRELID1	Q9Y255	219 aa		11.4	□□□□□ -0.58
FGFR1-222	ENST00000487647	CELSR1	Q9NYQ6	3014 aa		11.39	□□□□□ -0.59
FGFR1-222	ENST00000487647	NDUFB4	O95168	129 aa		11.39	□□□□□ -0.59
FGFR1-222	ENST00000487647	RPL7	P18124	248 aa	Known RBP	11.39	□□□□□ -0.59
FGFR1-222	ENST00000487647	NPPC	P23582	126 aa		11.39	□□□□□ -0.59
FGFR1-222	ENST00000487647	ARL3	P36405	182 aa		11.39	□□□□□ -0.59
FGFR1-222	ENST00000487647	RPL15	P61313	204 aa	Known RBP	11.39	□□□□□ -0.59
FGFR1-222	ENST00000487647	SUMO1	P63165	101 aa	Known RBP	11.39	□□□□□ -0.59
FGFR1-222	ENST00000487647	FOXE3	Q13461	319 aa		11.39	□□□□□ -0.59
FGFR1-222	ENST00000487647	ZNF674	Q2M3X9	581 aa		11.39	□□□□□ -0.59
FGFR1-222	ENST00000487647	OR4F17	Q8NGA8	305 aa		11.39	□□□□□ -0.59
FGFR1-222	ENST00000487647	KLK15	Q9H2R5	256 aa		11.39	□□□□□ -0.59
FGFR1-222	ENST00000487647	ZFAND3	Q9H8U3	227 aa		11.39	□□□□□ -0.59
FGFR1-222	ENST00000487647		A0A087WWC5	75 aa		11.38	□□□□□ -0.59
FGFR1-222	ENST00000487647	GGTLC3	B5MD39	225 aa		11.38	□□□□□ -0.59
FGFR1-222	ENST00000487647	MYCNOS	P40205	109 aa		11.38	□□□□□ -0.59
FGFR1-222	ENST00000487647	LEMD1	Q68G75	181 aa		11.38	□□□□□ -0.59
FGFR1-222	ENST00000487647	LYPD1	Q8N2G4	141 aa		11.38	□□□□□ -0.59
FGFR1-222	ENST00000487647	RPS10P5	Q9NQ39	176 aa		11.38	□□□□□ -0.59
FGFR1-222	ENST00000487647	SCO2	A0A1W2PP80	73 aa		11.38	□□□□□ -0.59
FGFR1-222	ENST00000487647	NDUFA4	O00483	81 aa		11.38	□□□□□ -0.59
FGFR1-222	ENST00000487647	TMEM95	Q3KNT9	176 aa		11.38	□□□□□ -0.59
FGFR1-222	ENST00000487647	C1orf194	Q5T5A4	169 aa		11.38	□□□□□ -0.59
FGFR1-222	ENST00000487647	RNF152	Q8N8N0	203 aa		11.38	□□□□□ -0.59
FGFR1-222	ENST00000487647	OR4X2	Q8NGF9	303 aa		11.38	□□□□□ -0.59
FGFR1-222	ENST00000487647	HIST1H2BA	Q96A08	127 aa		11.38	□□□□□ -0.59
FGFR1-222	ENST00000487647	ZNF414	Q96IQ9	312 aa		11.38	□□□□□ -0.59
FGFR1-222	ENST00000487647	GPR82	Q96P67	336 aa		11.38	□□□□□ -0.59
FGFR1-222	ENST00000487647	TUBA4B	Q9H853	241 aa		11.38	□□□□□ -0.59
FGFR1-222	ENST00000487647	SMCO4	Q9NRQ5	59 aa		11.38	□□□□□ -0.59
FGFR1-222	ENST00000487647	DNAJC9-AS1	A6NH13	148 aa		11.37	□□□□□ -0.59
FGFR1-222	ENST00000487647		C9JCJ5	164 aa		11.37	□□□□□ -0.59
FGFR1-222	ENST00000487647	DNASE2	O00115	360 aa	Predicted RBP	11.37	□□□□□ -0.59
FGFR1-222	ENST00000487647	MRPS12	O15235	138 aa	Known RBP	11.37	□□□□□ -0.59
FGFR1-222	ENST00000487647	IGLC2	P0DOY2	106 aa		11.37	□□□□□ -0.59
FGFR1-222	ENST00000487647	FOSL1	P15407	271 aa		11.37	□□□□□ -0.59
FGFR1-222	ENST00000487647	PDE6H	Q13956	83 aa		11.37	□□□□□ -0.59
FGFR1-222	ENST00000487647	ZNF329	Q86UD4	541 aa		11.37	□□□□□ -0.59
FGFR1-222	ENST00000487647	METTL26	Q96S19	204 aa		11.37	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms