RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 PPP1R14BQ96C90 147 aa2.69□□□□□ -1.98
CNN3-206ENST00000487539 TLCD1Q96CP7 247 aa2.69□□□□□ -1.98
CNN3-206ENST00000487539 C4orf36Q96KX1 117 aa2.69□□□□□ -1.98
CNN3-206ENST00000487539 NSMCE2Q96MF7 247 aa2.69□□□□□ -1.98
CNN3-206ENST00000487539 LINC00052Q96N35 136 aa2.69□□□□□ -1.98
CNN3-206ENST00000487539 LINC00467Q9BRT7 94 aa2.69□□□□□ -1.98
CNN3-206ENST00000487539 SAV1Q9H4B6 383 aaPredicted RBP2.69□□□□□ -1.98
CNN3-206ENST00000487539 DPH3P1Q9H4G8 78 aa2.69□□□□□ -1.98
CNN3-206ENST00000487539 REEP1Q9H902 201 aa2.69□□□□□ -1.98
CNN3-206ENST00000487539 TMEM138Q9NPI0 162 aa2.69□□□□□ -1.98
CNN3-206ENST00000487539 PAK1IP1Q9NWT1 392 aaPredicted RBP2.69□□□□□ -1.98
CNN3-206ENST00000487539 MRPL36Q9P0J6 103 aaKnown RBP2.69□□□□□ -1.98
CNN3-206ENST00000487539 TRAV12-2A0A075B6T6 113 aa2.68□□□□□ -1.98
CNN3-206ENST00000487539 TRBV6-6A0A0A6YYG2 114 aa2.68□□□□□ -1.98
CNN3-206ENST00000487539 TEX50A0A1B0GTY4 177 aa2.68□□□□□ -1.98
CNN3-206ENST00000487539 FAM168BA1KXE4 195 aa2.68□□□□□ -1.98
CNN3-206ENST00000487539 J3QRE1 110 aa2.68□□□□□ -1.98
CNN3-206ENST00000487539 M0R2Z0 102 aa2.68□□□□□ -1.98
CNN3-206ENST00000487539 UPK2O00526 184 aa2.68□□□□□ -1.98
CNN3-206ENST00000487539 MFNGO00587 321 aa2.68□□□□□ -1.98
CNN3-206ENST00000487539 CREBL2O60519 120 aaPredicted RBP2.68□□□□□ -1.98
CNN3-206ENST00000487539 HTN1P15515 57 aa2.68□□□□□ -1.98
CNN3-206ENST00000487539 NPPCP23582 126 aa2.68□□□□□ -1.98
CNN3-206ENST00000487539 CRYBB3P26998 211 aa2.68□□□□□ -1.98
CNN3-206ENST00000487539 CDKN1BP46527 198 aa2.68□□□□□ -1.98
CNN3-206ENST00000487539 RORCP51449 518 aa2.68□□□□□ -1.98
CNN3-206ENST00000487539 LYZP61626 148 aa2.68□□□□□ -1.98
CNN3-206ENST00000487539 MRPS15P82914 257 aaKnown RBP2.68□□□□□ -1.98
CNN3-206ENST00000487539 EIF4EBP1Q13541 118 aaPredicted RBP2.68□□□□□ -1.98
CNN3-206ENST00000487539 TPBGQ13641 420 aa2.68□□□□□ -1.98
CNN3-206ENST00000487539 RCN1Q15293 331 aa2.68□□□□□ -1.98
CNN3-206ENST00000487539 MAPRE2Q15555 327 aa2.68□□□□□ -1.98
CNN3-206ENST00000487539 ACOT6Q3I5F7 207 aaPredicted RBP2.68□□□□□ -1.98
CNN3-206ENST00000487539 XAF1Q6GPH4 301 aa2.68□□□□□ -1.98
CNN3-206ENST00000487539 LHFPL3Q86UP9 236 aa2.68□□□□□ -1.98
CNN3-206ENST00000487539 BAP18Q8IXM2 172 aa2.68□□□□□ -1.98
CNN3-206ENST00000487539 CMTM1Q8IZ96 169 aa2.68□□□□□ -1.98
CNN3-206ENST00000487539 JAGN1Q8N5M9 183 aa2.68□□□□□ -1.98
CNN3-206ENST00000487539 OR5AK2Q8NH90 309 aa2.68□□□□□ -1.98
CNN3-206ENST00000487539 BAALCQ8WXS3 180 aa2.68□□□□□ -1.98
CNN3-206ENST00000487539 IL22RA2Q969J5 263 aa2.68□□□□□ -1.98
CNN3-206ENST00000487539 IGF2BP2-AS1Q96M15 143 aa2.68□□□□□ -1.98
CNN3-206ENST00000487539 TMEM208Q9BTX3 173 aa2.68□□□□□ -1.98
CNN3-206ENST00000487539 RCL1Q9Y2P8 373 aaKnown RBP2.68□□□□□ -1.98
CNN3-206ENST00000487539 ARL2BPQ9Y2Y0 163 aa2.68□□□□□ -1.98
CNN3-206ENST00000487539 F11RQ9Y624 299 aaKnown RBP2.68□□□□□ -1.98
CNN3-206ENST00000487539 IGKV1D-8A0A087WSZ0 117 aa2.67□□□□□ -1.98
CNN3-206ENST00000487539 TRAV9-2A0A087WT02 112 aa2.67□□□□□ -1.98
CNN3-206ENST00000487539 IGKV1D-13A0A0B4J2D9 117 aa2.67□□□□□ -1.98
CNN3-206ENST00000487539 RBFOX3A6NFN3 312 aa2.67□□□□□ -1.98
CNN3-206ENST00000487539 TRDCB7Z8K6 153 aa2.67□□□□□ -1.98
CNN3-206ENST00000487539 H3BNG1 76 aa2.67□□□□□ -1.98
CNN3-206ENST00000487539 MT-CO2P00403 227 aa2.67□□□□□ -1.98
CNN3-206ENST00000487539 IGKV1-13P0DP09 117 aa2.67□□□□□ -1.98
CNN3-206ENST00000487539 CELP19835 753 aa2.67□□□□□ -1.98
CNN3-206ENST00000487539 POLR2IP36954 125 aaKnown RBP2.67□□□□□ -1.98
CNN3-206ENST00000487539 DAPP51397 102 aa2.67□□□□□ -1.98
CNN3-206ENST00000487539 MNAT1P51948 309 aa2.67□□□□□ -1.98
CNN3-206ENST00000487539 CLDN12P56749 244 aa2.67□□□□□ -1.98
CNN3-206ENST00000487539 UNC119Q13432 240 aa2.67□□□□□ -1.98
CNN3-206ENST00000487539 SPINK13Q1W4C9 94 aa2.67□□□□□ -1.98
CNN3-206ENST00000487539 ACSM3Q53FZ2 586 aa2.67□□□□□ -1.98
CNN3-206ENST00000487539 RBM48Q5RL73 367 aaKnown RBP2.67□□□□□ -1.98
CNN3-206ENST00000487539 C12orf73Q69YU5 71 aa2.67□□□□□ -1.98
CNN3-206ENST00000487539 SIGLEC15Q6ZMC9 328 aa2.67□□□□□ -1.98
CNN3-206ENST00000487539 ZNF600Q6ZNG1 722 aa2.67□□□□□ -1.98
CNN3-206ENST00000487539 RBPMSQ93062 196 aaKnown RBP2.67□□□□□ -1.98
CNN3-206ENST00000487539 CPNE2Q96FN4 548 aaPredicted RBP2.67□□□□□ -1.98
CNN3-206ENST00000487539 ADTRPQ96IZ2 230 aa2.67□□□□□ -1.98
CNN3-206ENST00000487539 ATP6V0BQ99437 205 aa2.67□□□□□ -1.98
CNN3-206ENST00000487539 GINS3Q9BRX5 216 aa2.67□□□□□ -1.98
CNN3-206ENST00000487539 HINT2Q9BX68 163 aa2.67□□□□□ -1.98
CNN3-206ENST00000487539 RIBC2Q9H4K1 309 aa2.67□□□□□ -1.98
CNN3-206ENST00000487539 HRASLSQ9HDD0 168 aa2.67□□□□□ -1.98
CNN3-206ENST00000487539 AMBNQ9NP70 447 aa2.67□□□□□ -1.98
CNN3-206ENST00000487539 ZNF446Q9NWS9 450 aa2.67□□□□□ -1.98
CNN3-206ENST00000487539 DHRS4-AS1Q9P1J3 65 aa2.67□□□□□ -1.98
CNN3-206ENST00000487539 WARS2Q9UGM6 360 aaKnown RBP2.67□□□□□ -1.98
CNN3-206ENST00000487539 MACF1Q9UPN3 7388 aaKnown RBP2.66□□□□□ -1.98
CNN3-206ENST00000487539 A0A087X0K7 114 aa2.66□□□□□ -1.98
CNN3-206ENST00000487539 TRBV6-7A0A0A0MS04 114 aa2.66□□□□□ -1.98
CNN3-206ENST00000487539 A0A0J9YX75 114 aa2.66□□□□□ -1.98
CNN3-206ENST00000487539 DAPL1A0PJW8 107 aa2.66□□□□□ -1.98
CNN3-206ENST00000487539 FABP7O15540 132 aa2.66□□□□□ -1.98
CNN3-206ENST00000487539 GNG7O60262 68 aa2.66□□□□□ -1.98
CNN3-206ENST00000487539 EDF1O60869 148 aaKnown RBP2.66□□□□□ -1.98
CNN3-206ENST00000487539 ZNF253O75346 499 aa2.66□□□□□ -1.98
CNN3-206ENST00000487539 TMEM50AO95807 157 aa2.66□□□□□ -1.98
CNN3-206ENST00000487539 TRAPPC2P0DI81 140 aa2.66□□□□□ -1.98
CNN3-206ENST00000487539 TRAPPC2BP0DI82 140 aa2.66□□□□□ -1.98
CNN3-206ENST00000487539 ANXA8P13928 327 aa2.66□□□□□ -1.98
CNN3-206ENST00000487539 HSD17B1P14061 328 aa2.66□□□□□ -1.98
CNN3-206ENST00000487539 EVI2AP22794 236 aa2.66□□□□□ -1.98
CNN3-206ENST00000487539 UCP1P25874 307 aa2.66□□□□□ -1.98
CNN3-206ENST00000487539 TSPOP30536 169 aa2.66□□□□□ -1.98
CNN3-206ENST00000487539 ATP6V1E1P36543 226 aa2.66□□□□□ -1.98
CNN3-206ENST00000487539 ID1P41134 155 aa2.66□□□□□ -1.98
CNN3-206ENST00000487539 TAS2R43P59537 309 aa2.66□□□□□ -1.98
CNN3-206ENST00000487539 SNRPD3P62318 126 aaKnown RBP2.66□□□□□ -1.98
CNN3-206ENST00000487539 PPP3R1P63098 170 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms