RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 OR4F4Q96R69 305 aa4.8□□□□□ -1.64
VAMP3-203ENST00000487194 PAXXQ9BUH6 204 aa4.8□□□□□ -1.64
VAMP3-203ENST00000487194 SLC25A2Q9BXI2 301 aa4.8□□□□□ -1.64
VAMP3-203ENST00000487194 OR51M1Q9H341 326 aa4.8□□□□□ -1.64
VAMP3-203ENST00000487194 GSX1Q9H4S2 264 aaPredicted RBP4.8□□□□□ -1.64
VAMP3-203ENST00000487194 LINC00527Q9UJ94 153 aa4.8□□□□□ -1.64
VAMP3-203ENST00000487194 ZNF469Q96JG9 3925 aaPredicted RBP4.79□□□□□ -1.64
VAMP3-203ENST00000487194 TRAV5A0A0B4J249 113 aa4.79□□□□□ -1.64
VAMP3-203ENST00000487194 FAM74A7A6NL05 159 aa4.79□□□□□ -1.64
VAMP3-203ENST00000487194 CLDN34H7C241 214 aa4.79□□□□□ -1.64
VAMP3-203ENST00000487194 BMPR1BO00238 502 aa4.79□□□□□ -1.64
VAMP3-203ENST00000487194 TGOLN2O43493 480 aa4.79□□□□□ -1.64
VAMP3-203ENST00000487194 IGHV3-23P01764 117 aa4.79□□□□□ -1.64
VAMP3-203ENST00000487194 IGHG4P01861 327 aa4.79□□□□□ -1.64
VAMP3-203ENST00000487194 ELANEP08246 267 aa4.79□□□□□ -1.64
VAMP3-203ENST00000487194 PF4V1P10720 104 aa4.79□□□□□ -1.64
VAMP3-203ENST00000487194 GPR183P32249 361 aa4.79□□□□□ -1.64
VAMP3-203ENST00000487194 RAB9AP51151 201 aa4.79□□□□□ -1.64
VAMP3-203ENST00000487194 CEBPGP53567 150 aa4.79□□□□□ -1.64
VAMP3-203ENST00000487194 CD81P60033 236 aa4.79□□□□□ -1.64
VAMP3-203ENST00000487194 UBE2G2P60604 165 aa4.79□□□□□ -1.64
VAMP3-203ENST00000487194 RPL15P61313 204 aaKnown RBP4.79□□□□□ -1.64
VAMP3-203ENST00000487194 CLEC19AQ6UXS0 136 aa4.79□□□□□ -1.64
VAMP3-203ENST00000487194 IL17RELQ6ZVW7 336 aa4.79□□□□□ -1.64
VAMP3-203ENST00000487194 Q8N2B8 174 aa4.79□□□□□ -1.64
VAMP3-203ENST00000487194 CYB561D1Q8N8Q1 229 aa4.79□□□□□ -1.64
VAMP3-203ENST00000487194 ZNF503Q96F45 646 aa4.79□□□□□ -1.64
VAMP3-203ENST00000487194 NOL4LQ96MY1 436 aaPredicted RBP4.79□□□□□ -1.64
VAMP3-203ENST00000487194 TCEAL7Q9BRU2 100 aa4.79□□□□□ -1.64
VAMP3-203ENST00000487194 NIPSNAP3BQ9BS92 247 aa4.79□□□□□ -1.64
VAMP3-203ENST00000487194 SHANK2-AS3Q9BTD1 123 aa4.79□□□□□ -1.64
VAMP3-203ENST00000487194 CHRDL1Q9BU40 450 aa4.79□□□□□ -1.64
VAMP3-203ENST00000487194 SLC25A39Q9BZJ4 359 aaPredicted RBP4.79□□□□□ -1.64
VAMP3-203ENST00000487194 ZNF702PQ9H963 129 aa4.79□□□□□ -1.64
VAMP3-203ENST00000487194 TMEM14CQ9P0S9 112 aa4.79□□□□□ -1.64
VAMP3-203ENST00000487194 RABAC1Q9UI14 185 aa4.79□□□□□ -1.64
VAMP3-203ENST00000487194 CDC42EP3Q9UKI2 254 aa4.79□□□□□ -1.64
VAMP3-203ENST00000487194 PUS1Q9Y606 427 aaKnown RBP eCLIP4.79□□□□□ -1.64
VAMP3-203ENST00000487194 S4R3C0 116 aa4.79□□□□□ -1.64
VAMP3-203ENST00000487194 ACANP16112 2415 aa4.78□□□□□ -1.64
VAMP3-203ENST00000487194 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.78□□□□□ -1.64
VAMP3-203ENST00000487194 ZNF727A8MUV8 499 aa4.78□□□□□ -1.64
VAMP3-203ENST00000487194 H3BRN7 92 aa4.78□□□□□ -1.64
VAMP3-203ENST00000487194 HIST1H1EP10412 219 aaKnown RBP4.78□□□□□ -1.64
VAMP3-203ENST00000487194 FOSL1P15407 271 aa4.78□□□□□ -1.64
VAMP3-203ENST00000487194 SRD5A1P18405 259 aa4.78□□□□□ -1.64
VAMP3-203ENST00000487194 PSMB8P28062 276 aa4.78□□□□□ -1.64
VAMP3-203ENST00000487194 ADMP35318 185 aa4.78□□□□□ -1.64
VAMP3-203ENST00000487194 ATP5G3P48201 142 aa4.78□□□□□ -1.64
VAMP3-203ENST00000487194 PNRC1Q12796 327 aaPredicted RBP4.78□□□□□ -1.64
VAMP3-203ENST00000487194 FOXE3Q13461 319 aa4.78□□□□□ -1.64
VAMP3-203ENST00000487194 GUCA2BQ16661 112 aa4.78□□□□□ -1.64
VAMP3-203ENST00000487194 MORN5Q5VZ52 161 aa4.78□□□□□ -1.64
VAMP3-203ENST00000487194 FAM90A2PQ658T7 463 aa4.78□□□□□ -1.64
VAMP3-203ENST00000487194 TEX38Q6PEX7 206 aa4.78□□□□□ -1.64
VAMP3-203ENST00000487194 Q6ZS46 218 aa4.78□□□□□ -1.64
VAMP3-203ENST00000487194 BPIFA4PQ86YQ2 179 aa4.78□□□□□ -1.64
VAMP3-203ENST00000487194 CLRN3Q8NCR9 226 aa4.78□□□□□ -1.64
VAMP3-203ENST00000487194 ZNF418Q8TF45 676 aaPredicted RBP4.78□□□□□ -1.64
VAMP3-203ENST00000487194 RPUSD4Q96CM3 377 aaKnown RBP4.78□□□□□ -1.64
VAMP3-203ENST00000487194 FXYD5Q96DB9 178 aa4.78□□□□□ -1.64
VAMP3-203ENST00000487194 TVP23CQ96ET8 276 aa4.78□□□□□ -1.64
VAMP3-203ENST00000487194 CCDC140Q96MF4 163 aa4.78□□□□□ -1.64
VAMP3-203ENST00000487194 JMJD8Q96S16 334 aa4.78□□□□□ -1.64
VAMP3-203ENST00000487194 GNB4Q9HAV0 340 aa4.78□□□□□ -1.64
VAMP3-203ENST00000487194 SONP18583 2426 aaKnown RBP4.78□□□□□ -1.64
VAMP3-203ENST00000487194 MTORP42345 2549 aa4.78□□□□□ -1.64
VAMP3-203ENST00000487194 CELSR1Q9NYQ6 3014 aa4.77□□□□□ -1.65
VAMP3-203ENST00000487194 DNAJC9-AS1A6NH13 148 aa4.77□□□□□ -1.65
VAMP3-203ENST00000487194 ZNF98A6NK75 572 aa4.77□□□□□ -1.65
VAMP3-203ENST00000487194 B4DEV8 164 aa4.77□□□□□ -1.65
VAMP3-203ENST00000487194 H3BQ15 152 aa4.77□□□□□ -1.65
VAMP3-203ENST00000487194 M0R036 132 aa4.77□□□□□ -1.65
VAMP3-203ENST00000487194 NDUFA4O00483 81 aa4.77□□□□□ -1.65
VAMP3-203ENST00000487194 GGCTO75223 188 aaKnown RBP4.77□□□□□ -1.65
VAMP3-203ENST00000487194 CRYBA1P05813 215 aa4.77□□□□□ -1.65
VAMP3-203ENST00000487194 OR10J4P0C629 311 aa4.77□□□□□ -1.65
VAMP3-203ENST00000487194 NBEAP1P0C6P0 100 aa4.77□□□□□ -1.65
VAMP3-203ENST00000487194 PYYP10082 97 aa4.77□□□□□ -1.65
VAMP3-203ENST00000487194 GP9P14770 177 aa4.77□□□□□ -1.65
VAMP3-203ENST00000487194 RPL7P18124 248 aaKnown RBP4.77□□□□□ -1.65
VAMP3-203ENST00000487194 ARL3P36405 182 aa4.77□□□□□ -1.65
VAMP3-203ENST00000487194 RHEBQ15382 184 aa4.77□□□□□ -1.65
VAMP3-203ENST00000487194 USF2Q15853 346 aaPredicted RBP4.77□□□□□ -1.65
VAMP3-203ENST00000487194 TMEM241Q24JQ0 296 aa4.77□□□□□ -1.65
VAMP3-203ENST00000487194 ZNF343Q6P1L6 599 aa4.77□□□□□ -1.65
VAMP3-203ENST00000487194 TOMM20LQ6UXN7 152 aa4.77□□□□□ -1.65
VAMP3-203ENST00000487194 OR4F17Q8NGA8 305 aa4.77□□□□□ -1.65
VAMP3-203ENST00000487194 OR4X2Q8NGF9 303 aa4.77□□□□□ -1.65
VAMP3-203ENST00000487194 HIST1H2BAQ96A08 127 aa4.77□□□□□ -1.65
VAMP3-203ENST00000487194 C11orf52Q96A22 123 aa4.77□□□□□ -1.65
VAMP3-203ENST00000487194 GPR82Q96P67 336 aa4.77□□□□□ -1.65
VAMP3-203ENST00000487194 METTL26Q96S19 204 aa4.77□□□□□ -1.65
VAMP3-203ENST00000487194 SMIM7Q9BQ49 75 aa4.77□□□□□ -1.65
VAMP3-203ENST00000487194 KLK15Q9H2R5 256 aa4.77□□□□□ -1.65
VAMP3-203ENST00000487194 NAT8Q9UHE5 227 aa4.77□□□□□ -1.65
VAMP3-203ENST00000487194 PRELID1Q9Y255 219 aa4.77□□□□□ -1.65
VAMP3-203ENST00000487194 YTHDF2Q9Y5A9 579 aaKnown RBP4.77□□□□□ -1.65
VAMP3-203ENST00000487194 HIVEP2P31629 2446 aa4.77□□□□□ -1.65
VAMP3-203ENST00000487194 NBEAL1Q6ZS30 2694 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms