RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 HOXA3O43365 443 aaPredicted RBP5.5□□□□□ -1.53
SF3A3-206ENST00000487062 SCO1O75880 301 aa5.5□□□□□ -1.53
SF3A3-206ENST00000487062 OR2C1O95371 312 aa5.5□□□□□ -1.53
SF3A3-206ENST00000487062 IL4P05112 153 aa5.5□□□□□ -1.53
SF3A3-206ENST00000487062 BLCAPP62952 87 aa5.5□□□□□ -1.53
SF3A3-206ENST00000487062 UBE2L3P68036 154 aaKnown RBP5.5□□□□□ -1.53
SF3A3-206ENST00000487062 PNRC1Q12796 327 aaPredicted RBP5.5□□□□□ -1.53
SF3A3-206ENST00000487062 FAM209BQ5JX69 171 aa5.5□□□□□ -1.53
SF3A3-206ENST00000487062 FAM90A2PQ658T7 463 aa5.5□□□□□ -1.53
SF3A3-206ENST00000487062 ZNF600Q6ZNG1 722 aa5.5□□□□□ -1.53
SF3A3-206ENST00000487062 TMEM86BQ8N661 226 aa5.5□□□□□ -1.53
SF3A3-206ENST00000487062 RNF125Q96EQ8 232 aa5.5□□□□□ -1.53
SF3A3-206ENST00000487062 FAM167A-AS1Q96KT0 104 aa5.5□□□□□ -1.53
SF3A3-206ENST00000487062 MS4A10Q96PG2 267 aa5.5□□□□□ -1.53
SF3A3-206ENST00000487062 SMIM7Q9BQ49 75 aa5.5□□□□□ -1.53
SF3A3-206ENST00000487062 SLC25A2Q9BXI2 301 aa5.5□□□□□ -1.53
SF3A3-206ENST00000487062 SLC25A39Q9BZJ4 359 aaPredicted RBP5.5□□□□□ -1.53
SF3A3-206ENST00000487062 NPFFR1Q9GZQ6 430 aa5.5□□□□□ -1.53
SF3A3-206ENST00000487062 YAE1D1Q9NRH1 226 aa5.5□□□□□ -1.53
SF3A3-206ENST00000487062 AP5S1Q9NUS5 200 aa5.5□□□□□ -1.53
SF3A3-206ENST00000487062 MRPL27Q9P0M9 148 aaKnown RBP5.5□□□□□ -1.53
SF3A3-206ENST00000487062 LINC00527Q9UJ94 153 aa5.5□□□□□ -1.53
SF3A3-206ENST00000487062 PUS1Q9Y606 427 aaKnown RBP eCLIP5.5□□□□□ -1.53
SF3A3-206ENST00000487062 S4R3C0 116 aa5.5□□□□□ -1.53
SF3A3-206ENST00000487062 POLQO75417 2590 aa5.5□□□□□ -1.53
SF3A3-206ENST00000487062 ABCA12Q86UK0 2595 aa5.5□□□□□ -1.53
SF3A3-206ENST00000487062 TRAV5A0A0B4J249 113 aa5.49□□□□□ -1.53
SF3A3-206ENST00000487062 TMEM89A2RUT3 159 aa5.49□□□□□ -1.53
SF3A3-206ENST00000487062 FAM74A7A6NL05 159 aa5.49□□□□□ -1.53
SF3A3-206ENST00000487062 B4DEV8 164 aa5.49□□□□□ -1.53
SF3A3-206ENST00000487062 H3BRN7 92 aa5.49□□□□□ -1.53
SF3A3-206ENST00000487062 BMPR1BO00238 502 aa5.49□□□□□ -1.53
SF3A3-206ENST00000487062 TGOLN2O43493 480 aa5.49□□□□□ -1.53
SF3A3-206ENST00000487062 IGHV3-23P01764 117 aa5.49□□□□□ -1.53
SF3A3-206ENST00000487062 CTSGP08311 255 aa5.49□□□□□ -1.53
SF3A3-206ENST00000487062 OR10J4P0C629 311 aa5.49□□□□□ -1.53
SF3A3-206ENST00000487062 PPIFP30405 207 aaKnown RBP5.49□□□□□ -1.53
SF3A3-206ENST00000487062 GPR183P32249 361 aa5.49□□□□□ -1.53
SF3A3-206ENST00000487062 ATP5G3P48201 142 aa5.49□□□□□ -1.53
SF3A3-206ENST00000487062 TPPP2P59282 170 aa5.49□□□□□ -1.53
SF3A3-206ENST00000487062 SLC35B1P78383 322 aa5.49□□□□□ -1.53
SF3A3-206ENST00000487062 RELQ04864 619 aaPredicted RBP5.49□□□□□ -1.53
SF3A3-206ENST00000487062 RHEBQ15382 184 aa5.49□□□□□ -1.53
SF3A3-206ENST00000487062 TMEM241Q24JQ0 296 aa5.49□□□□□ -1.53
SF3A3-206ENST00000487062 AWAT1Q58HT5 328 aa5.49□□□□□ -1.53
SF3A3-206ENST00000487062 CT83Q5H943 113 aa5.49□□□□□ -1.53
SF3A3-206ENST00000487062 ATRAIDQ6UW56 229 aa5.49□□□□□ -1.53
SF3A3-206ENST00000487062 BPIFA4PQ86YQ2 179 aa5.49□□□□□ -1.53
SF3A3-206ENST00000487062 SIGLECL1Q8N7X8 197 aa5.49□□□□□ -1.53
SF3A3-206ENST00000487062 ZNF491Q8N8L2 437 aa5.49□□□□□ -1.53
SF3A3-206ENST00000487062 TMEM190Q8WZ59 177 aa5.49□□□□□ -1.53
SF3A3-206ENST00000487062 RPUSD4Q96CM3 377 aaKnown RBP5.49□□□□□ -1.53
SF3A3-206ENST00000487062 ZNF503Q96F45 646 aa5.49□□□□□ -1.53
SF3A3-206ENST00000487062 PARLQ9H300 379 aa5.49□□□□□ -1.53
SF3A3-206ENST00000487062 GNB4Q9HAV0 340 aa5.49□□□□□ -1.53
SF3A3-206ENST00000487062 RPS10P5Q9NQ39 176 aa5.49□□□□□ -1.53
SF3A3-206ENST00000487062 TMEM14CQ9P0S9 112 aa5.49□□□□□ -1.53
SF3A3-206ENST00000487062 NAT8Q9UHE5 227 aa5.49□□□□□ -1.53
SF3A3-206ENST00000487062 RABAC1Q9UI14 185 aa5.49□□□□□ -1.53
SF3A3-206ENST00000487062 X6R8D5 127 aa5.49□□□□□ -1.53
SF3A3-206ENST00000487062 HELZ2Q9BYK8 2649 aaKnown RBP5.49□□□□□ -1.53
SF3A3-206ENST00000487062 ABCA1O95477 2261 aa5.48□□□□□ -1.53
SF3A3-206ENST00000487062 IGLV1-40P01703 118 aa5.48□□□□□ -1.53
SF3A3-206ENST00000487062 CLEC3BP05452 202 aa5.48□□□□□ -1.53
SF3A3-206ENST00000487062 NBEAP1P0C6P0 100 aa5.48□□□□□ -1.53
SF3A3-206ENST00000487062 PYYP10082 97 aa5.48□□□□□ -1.53
SF3A3-206ENST00000487062 RAB9AP51151 201 aa5.48□□□□□ -1.53
SF3A3-206ENST00000487062 BTN1A1Q13410 526 aa5.48□□□□□ -1.53
SF3A3-206ENST00000487062 KIAA0141Q14154 515 aaPredicted RBP5.48□□□□□ -1.53
SF3A3-206ENST00000487062 ZNF674Q2M3X9 581 aa5.48□□□□□ -1.53
SF3A3-206ENST00000487062 MORN5Q5VZ52 161 aa5.48□□□□□ -1.53
SF3A3-206ENST00000487062 CLEC19AQ6UXS0 136 aa5.48□□□□□ -1.53
SF3A3-206ENST00000487062 OR4F17Q8NGA8 305 aa5.48□□□□□ -1.53
SF3A3-206ENST00000487062 FXYD5Q96DB9 178 aa5.48□□□□□ -1.53
SF3A3-206ENST00000487062 NOL4LQ96MY1 436 aaPredicted RBP5.48□□□□□ -1.53
SF3A3-206ENST00000487062 TCEAL7Q9BRU2 100 aa5.48□□□□□ -1.53
SF3A3-206ENST00000487062 SHANK2-AS3Q9BTD1 123 aa5.48□□□□□ -1.53
SF3A3-206ENST00000487062 CHRDL1Q9BU40 450 aa5.48□□□□□ -1.53
SF3A3-206ENST00000487062 SDF2L1Q9HCN8 221 aa5.48□□□□□ -1.53
SF3A3-206ENST00000487062 TMEM160Q9NX00 188 aa5.48□□□□□ -1.53
SF3A3-206ENST00000487062 YTHDF2Q9Y5A9 579 aaKnown RBP5.48□□□□□ -1.53
SF3A3-206ENST00000487062 PDZD2O15018 2839 aa5.48□□□□□ -1.53
SF3A3-206ENST00000487062 GCN1Q92616 2671 aaKnown RBP5.48□□□□□ -1.53
SF3A3-206ENST00000487062 MAP1AP78559 2803 aaPredicted RBP5.47□□□□□ -1.53
SF3A3-206ENST00000487062 C7orf77A4D0Y5 90 aa5.47□□□□□ -1.53
SF3A3-206ENST00000487062 ZNF98A6NK75 572 aa5.47□□□□□ -1.53
SF3A3-206ENST00000487062 TSPAN4O14817 238 aa5.47□□□□□ -1.53
SF3A3-206ENST00000487062 NDUFB4O95168 129 aa5.47□□□□□ -1.53
SF3A3-206ENST00000487062 HIST1H1EP10412 219 aaKnown RBP5.47□□□□□ -1.53
SF3A3-206ENST00000487062 GP9P14770 177 aa5.47□□□□□ -1.53
SF3A3-206ENST00000487062 ADMP35318 185 aa5.47□□□□□ -1.53
SF3A3-206ENST00000487062 ARL3P36405 182 aa5.47□□□□□ -1.53
SF3A3-206ENST00000487062 CFHR3Q02985 330 aa5.47□□□□□ -1.53
SF3A3-206ENST00000487062 KRTAP1-1Q07627 177 aa5.47□□□□□ -1.53
SF3A3-206ENST00000487062 USF2Q15853 346 aaPredicted RBP5.47□□□□□ -1.53
SF3A3-206ENST00000487062 IL17RELQ6ZVW7 336 aa5.47□□□□□ -1.53
SF3A3-206ENST00000487062 BLNKQ8WV28 456 aa5.47□□□□□ -1.53
SF3A3-206ENST00000487062 C11orf52Q96A22 123 aa5.47□□□□□ -1.53
SF3A3-206ENST00000487062 RAX2Q96IS3 184 aa5.47□□□□□ -1.53
SF3A3-206ENST00000487062 C20orf24Q9BUV8 137 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms