RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 OR5H6Q8NGV6 325 aa2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 SLC25A46Q96AG3 418 aa2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 MOB3AQ96BX8 217 aa2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 SLC25A38Q96DW6 304 aa2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 ZNF2Q9BSG1 426 aaPredicted RBP2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 RNF126Q9BV68 326 aa2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 MS4A6AQ9H2W1 248 aa2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 TMEM14BQ9NUH8 114 aa2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 SSR3Q9UNL2 185 aa2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 NSG2Q9Y328 171 aa2.82□□□□□ -1.96
SNRNP40-205ENST00000486941 DNAH17Q9UFH2 4485 aa2.81□□□□□ -1.96
SNRNP40-205ENST00000486941 INS-IGF2F8WCM5 200 aa2.81□□□□□ -1.96
SNRNP40-205ENST00000486941 K7EQG2 157 aa2.81□□□□□ -1.96
SNRNP40-205ENST00000486941 RTL8CO15255 209 aa2.81□□□□□ -1.96
SNRNP40-205ENST00000486941 TMEM50AO95807 157 aa2.81□□□□□ -1.96
SNRNP40-205ENST00000486941 FCER2P06734 321 aa2.81□□□□□ -1.96
SNRNP40-205ENST00000486941 P0DMU3 169 aa2.81□□□□□ -1.96
SNRNP40-205ENST00000486941 FAM231AP0DMU4 169 aa2.81□□□□□ -1.96
SNRNP40-205ENST00000486941 FAM231CP0DMU5 169 aa2.81□□□□□ -1.96
SNRNP40-205ENST00000486941 NPPCP23582 126 aa2.81□□□□□ -1.96
SNRNP40-205ENST00000486941 PSMB9P28065 219 aa2.81□□□□□ -1.96
SNRNP40-205ENST00000486941 HSPA13P48723 471 aa2.81□□□□□ -1.96
SNRNP40-205ENST00000486941 TAS2R46P59540 309 aa2.81□□□□□ -1.96
SNRNP40-205ENST00000486941 HSPE1P61604 102 aaKnown RBP2.81□□□□□ -1.96
SNRNP40-205ENST00000486941 VAMP2P63027 116 aa2.81□□□□□ -1.96
SNRNP40-205ENST00000486941 ERHP84090 104 aaKnown RBP2.81□□□□□ -1.96
SNRNP40-205ENST00000486941 C12orf74Q32Q52 190 aa2.81□□□□□ -1.96
SNRNP40-205ENST00000486941 LGALS9BQ3B8N2 356 aa2.81□□□□□ -1.96
SNRNP40-205ENST00000486941 IDNKQ5T6J7 187 aa2.81□□□□□ -1.96
SNRNP40-205ENST00000486941 LEMD1Q68G75 181 aa2.81□□□□□ -1.96
SNRNP40-205ENST00000486941 LPCAT3Q6P1A2 487 aa2.81□□□□□ -1.96
SNRNP40-205ENST00000486941 ZNF600Q6ZNG1 722 aa2.81□□□□□ -1.96
SNRNP40-205ENST00000486941 H2BFWTQ7Z2G1 175 aa2.81□□□□□ -1.96
SNRNP40-205ENST00000486941 CSNK1G2-AS1Q8NCQ2 148 aa2.81□□□□□ -1.96
SNRNP40-205ENST00000486941 OR6F1Q8NGZ6 308 aa2.81□□□□□ -1.96
SNRNP40-205ENST00000486941 OR4A16Q8NH70 328 aa2.81□□□□□ -1.96
SNRNP40-205ENST00000486941 FCGR1BQ92637 280 aa2.81□□□□□ -1.96
SNRNP40-205ENST00000486941 S100A16Q96FQ6 103 aaKnown RBP2.81□□□□□ -1.96
SNRNP40-205ENST00000486941 SEC22AQ96IW7 307 aa2.81□□□□□ -1.96
SNRNP40-205ENST00000486941 CNBD2Q96M20 576 aa2.81□□□□□ -1.96
SNRNP40-205ENST00000486941 VCX3BQ9H321 246 aa2.81□□□□□ -1.96
SNRNP40-205ENST00000486941 TMEM231Q9H6L2 316 aa2.81□□□□□ -1.96
SNRNP40-205ENST00000486941 IFT46Q9NQC8 304 aa2.81□□□□□ -1.96
SNRNP40-205ENST00000486941 EHFQ9NZC4 300 aa2.81□□□□□ -1.96
SNRNP40-205ENST00000486941 RABAC1Q9UI14 185 aa2.81□□□□□ -1.96
SNRNP40-205ENST00000486941 TBC1D24Q9ULP9 559 aa2.81□□□□□ -1.96
SNRNP40-205ENST00000486941 RAB26Q9ULW5 256 aa2.81□□□□□ -1.96
SNRNP40-205ENST00000486941 ANAPC10Q9UM13 185 aa2.81□□□□□ -1.96
SNRNP40-205ENST00000486941 PUS1Q9Y606 427 aaKnown RBP eCLIP2.81□□□□□ -1.96
SNRNP40-205ENST00000486941 NACAE9PAV3 2078 aa2.81□□□□□ -1.96
SNRNP40-205ENST00000486941 DEFB131BA0A096LNP1 70 aa2.8□□□□□ -1.96
SNRNP40-205ENST00000486941 MEIS3P1A6NDR6 274 aa2.8□□□□□ -1.96
SNRNP40-205ENST00000486941 CORTO00230 105 aa2.8□□□□□ -1.96
SNRNP40-205ENST00000486941 CLN5O75503 358 aa2.8□□□□□ -1.96
SNRNP40-205ENST00000486941 SCGB2A1O75556 95 aa2.8□□□□□ -1.96
SNRNP40-205ENST00000486941 IGKV1-39P01597 117 aa2.8□□□□□ -1.96
SNRNP40-205ENST00000486941 IGHV3-48P01763 117 aa2.8□□□□□ -1.96
SNRNP40-205ENST00000486941 PMP2P02689 132 aa2.8□□□□□ -1.96
SNRNP40-205ENST00000486941 IGKV1D-39P04432 117 aa2.8□□□□□ -1.96
SNRNP40-205ENST00000486941 NPY1RP25929 384 aa2.8□□□□□ -1.96
SNRNP40-205ENST00000486941 CRYBB3P26998 211 aa2.8□□□□□ -1.96
SNRNP40-205ENST00000486941 S100GP29377 79 aa2.8□□□□□ -1.96
SNRNP40-205ENST00000486941 PRSS3P35030 304 aa2.8□□□□□ -1.96
SNRNP40-205ENST00000486941 SNCAP37840 140 aa2.8□□□□□ -1.96
SNRNP40-205ENST00000486941 RPL5P46777 297 aaKnown RBP2.8□□□□□ -1.96
SNRNP40-205ENST00000486941 P2RY1P47900 373 aa2.8□□□□□ -1.96
SNRNP40-205ENST00000486941 AP2S1P53680 142 aaPredicted RBP2.8□□□□□ -1.96
SNRNP40-205ENST00000486941 SUB1P53999 127 aaKnown RBP eCLIP2.8□□□□□ -1.963e-10■■■□□ 14.8
SNRNP40-205ENST00000486941 TSPAN5P62079 268 aa2.8□□□□□ -1.96
SNRNP40-205ENST00000486941 MXD1Q05195 221 aa2.8□□□□□ -1.96
SNRNP40-205ENST00000486941 KCTD21Q4G0X4 260 aa2.8□□□□□ -1.96
SNRNP40-205ENST00000486941 IZUMO2Q6UXV1 221 aa2.8□□□□□ -1.96
SNRNP40-205ENST00000486941 CROCCP3Q8IVE0 287 aa2.8□□□□□ -1.96
SNRNP40-205ENST00000486941 FAM24BQ8N5W8 94 aa2.8□□□□□ -1.96
SNRNP40-205ENST00000486941 STXBP6Q8NFX7 210 aa2.8□□□□□ -1.96
SNRNP40-205ENST00000486941 OR5H2Q8NGV7 314 aa2.8□□□□□ -1.96
SNRNP40-205ENST00000486941 DCANP1Q8TF63 244 aa2.8□□□□□ -1.96
SNRNP40-205ENST00000486941 PINX1Q96BK5 328 aaKnown RBP2.8□□□□□ -1.96
SNRNP40-205ENST00000486941 NARS2Q96I59 477 aaKnown RBP2.8□□□□□ -1.96
SNRNP40-205ENST00000486941 FAM210BQ96KR6 192 aa2.8□□□□□ -1.96
SNRNP40-205ENST00000486941 METTL26Q96S19 204 aa2.8□□□□□ -1.96
SNRNP40-205ENST00000486941 RAB40CQ96S21 281 aa2.8□□□□□ -1.96
SNRNP40-205ENST00000486941 NDUFAF3Q9BU61 184 aa2.8□□□□□ -1.96
SNRNP40-205ENST00000486941 YTHDF1Q9BYJ9 559 aaKnown RBP2.8□□□□□ -1.96
SNRNP40-205ENST00000486941 FXYD6Q9H0Q3 95 aa2.8□□□□□ -1.96
SNRNP40-205ENST00000486941 PKHD1P08F94 4074 aa2.79□□□□□ -1.96
SNRNP40-205ENST00000486941 FAT2Q9NYQ8 4349 aa2.79□□□□□ -1.96
SNRNP40-205ENST00000486941 TRAV30A0A087WSZ9 112 aa2.79□□□□□ -1.96
SNRNP40-205ENST00000486941 IGHV3-66A0A0C4DH42 116 aa2.79□□□□□ -1.96
SNRNP40-205ENST00000486941 LOC100506127A0A0U1RQW1 187 aa2.79□□□□□ -1.96
SNRNP40-205ENST00000486941 HELTA6NFD8 242 aa2.79□□□□□ -1.96
SNRNP40-205ENST00000486941 SMIM9A6NGZ8 99 aa2.79□□□□□ -1.96
SNRNP40-205ENST00000486941 KNCNA6PVL3 124 aa2.79□□□□□ -1.96
SNRNP40-205ENST00000486941 ANKRD65E5RJM6 399 aa2.79□□□□□ -1.96
SNRNP40-205ENST00000486941 ATG12O94817 140 aa2.79□□□□□ -1.96
SNRNP40-205ENST00000486941 IFNA10P01566 189 aa2.79□□□□□ -1.96
SNRNP40-205ENST00000486941 IFNA21P01568 189 aa2.79□□□□□ -1.96
SNRNP40-205ENST00000486941 IFNA17P01571 189 aa2.79□□□□□ -1.96
SNRNP40-205ENST00000486941 CD74P04233 296 aa2.79□□□□□ -1.96
SNRNP40-205ENST00000486941 ZNF688P0C7X2 276 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms