RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 PRTN3P24158 256 aa7.21□□□□□ -1.25
COL12A1-208ENST00000486533 BRS3P32247 399 aa7.21□□□□□ -1.25
COL12A1-208ENST00000486533 MC5RP33032 325 aa7.21□□□□□ -1.25
COL12A1-208ENST00000486533 ZNF134P52741 427 aa7.21□□□□□ -1.25
COL12A1-208ENST00000486533 RPL8P62917 257 aaKnown RBP7.21□□□□□ -1.25
COL12A1-208ENST00000486533 PAX2Q02962 417 aa7.21□□□□□ -1.25
COL12A1-208ENST00000486533 VMA21Q3ZAQ7 101 aa7.21□□□□□ -1.25
COL12A1-208ENST00000486533 TMEM177Q53S58 311 aa7.21□□□□□ -1.25
COL12A1-208ENST00000486533 FAM53AQ6NSI3 398 aaPredicted RBP7.21□□□□□ -1.25
COL12A1-208ENST00000486533 ZNF664Q8N3J9 261 aa7.21□□□□□ -1.25
COL12A1-208ENST00000486533 OR5AU1Q8NGC0 362 aa7.21□□□□□ -1.25
COL12A1-208ENST00000486533 DERL1Q9BUN8 251 aa7.21□□□□□ -1.25
COL12A1-208ENST00000486533 ZNF430Q9H8G1 570 aaPredicted RBP7.21□□□□□ -1.25
COL12A1-208ENST00000486533 MGAM2Q2M2H8 2515 aa7.21□□□□□ -1.26
COL12A1-208ENST00000486533 PKD1L1Q8TDX9 2849 aa7.2□□□□□ -1.26
COL12A1-208ENST00000486533 TEX50A0A1B0GTY4 177 aa7.2□□□□□ -1.26
COL12A1-208ENST00000486533 ENSAO43768 121 aaKnown RBP7.2□□□□□ -1.26
COL12A1-208ENST00000486533 COX7A2P2O60397 106 aa7.2□□□□□ -1.26
COL12A1-208ENST00000486533 LINC00869P0C866 280 aa7.2□□□□□ -1.26
COL12A1-208ENST00000486533 PPIAL4GP0DN37 164 aa7.2□□□□□ -1.26
COL12A1-208ENST00000486533 NDUFB7P17568 137 aa7.2□□□□□ -1.26
COL12A1-208ENST00000486533 RAB4AP20338 218 aa7.2□□□□□ -1.26
COL12A1-208ENST00000486533 GNG10P50151 68 aa7.2□□□□□ -1.26
COL12A1-208ENST00000486533 CX3CL1P78423 397 aa7.2□□□□□ -1.26
COL12A1-208ENST00000486533 FAM231DQ6ZW35 169 aa7.2□□□□□ -1.26
COL12A1-208ENST00000486533 LINC00311Q8N616 119 aa7.2□□□□□ -1.26
COL12A1-208ENST00000486533 OR4B1Q8NGF8 309 aa7.2□□□□□ -1.26
COL12A1-208ENST00000486533 OR4C13Q8NGP0 309 aa7.2□□□□□ -1.26
COL12A1-208ENST00000486533 OR10X1Q8NGY0 326 aa7.2□□□□□ -1.26
COL12A1-208ENST00000486533 FLYWCH2Q96CP2 140 aaKnown RBP7.2□□□□□ -1.26
COL12A1-208ENST00000486533 HARBI1Q96MB7 349 aa7.2□□□□□ -1.26
COL12A1-208ENST00000486533 ZNF48Q96MX3 618 aaPredicted RBP7.2□□□□□ -1.26
COL12A1-208ENST00000486533 RBM14Q96PK6 669 aaKnown RBP7.2□□□□□ -1.26
COL12A1-208ENST00000486533 C20orf144Q9BQM9 153 aa7.2□□□□□ -1.26
COL12A1-208ENST00000486533 SEPSECSQ9HD40 501 aaKnown RBP7.2□□□□□ -1.26
COL12A1-208ENST00000486533 ZNF331Q9NQX6 463 aaPredicted RBP7.2□□□□□ -1.26
COL12A1-208ENST00000486533 DSCAML1Q8TD84 2053 aa7.2□□□□□ -1.26
COL12A1-208ENST00000486533 TET2Q6N021 2002 aaPredicted RBP7.2□□□□□ -1.26
COL12A1-208ENST00000486533 TRBV20OR9-2A0A075B6H5 130 aa7.2□□□□□ -1.26
COL12A1-208ENST00000486533 C22orf46C9J442 243 aa7.2□□□□□ -1.26
COL12A1-208ENST00000486533 CORTO00230 105 aa7.2□□□□□ -1.26
COL12A1-208ENST00000486533 MMP23AO75900 390 aa7.2□□□□□ -1.26
COL12A1-208ENST00000486533 REG1AP05451 166 aa7.2□□□□□ -1.26
COL12A1-208ENST00000486533 SAA1P0DJI8 122 aaPredicted RBP7.2□□□□□ -1.26
COL12A1-208ENST00000486533 RNASE2P10153 161 aaKnown RBP7.2□□□□□ -1.26
COL12A1-208ENST00000486533 DEFA4P12838 97 aa7.2□□□□□ -1.26
COL12A1-208ENST00000486533 LINC00205P59089 165 aa7.2□□□□□ -1.26
COL12A1-208ENST00000486533 UBE2L3P68036 154 aaKnown RBP7.2□□□□□ -1.26
COL12A1-208ENST00000486533 LRRC10Q5BKY1 277 aa7.2□□□□□ -1.26
COL12A1-208ENST00000486533 IBA57Q5T440 356 aaKnown RBP7.2□□□□□ -1.26
COL12A1-208ENST00000486533 TOMM20LQ6UXN7 152 aa7.2□□□□□ -1.26
COL12A1-208ENST00000486533 BRD3OSQ6XYD6 125 aa7.2□□□□□ -1.26
COL12A1-208ENST00000486533 ZNF841Q6ZN19 808 aa7.2□□□□□ -1.26
COL12A1-208ENST00000486533 MIR17HGQ75NE6 70 aa7.2□□□□□ -1.26
COL12A1-208ENST00000486533 ZNF114Q8NC26 417 aa7.2□□□□□ -1.26
COL12A1-208ENST00000486533 TMEM167AQ8TBQ9 72 aa7.2□□□□□ -1.26
COL12A1-208ENST00000486533 VAMP8Q9BV40 100 aa7.2□□□□□ -1.26
COL12A1-208ENST00000486533 DNAJC4Q9NNZ3 241 aa7.2□□□□□ -1.26
COL12A1-208ENST00000486533 CTSZQ9UBR2 303 aa7.2□□□□□ -1.26
COL12A1-208ENST00000486533 NAT8BQ9UHF3 227 aa7.2□□□□□ -1.26
COL12A1-208ENST00000486533 WASHC3Q9Y3C0 194 aa7.2□□□□□ -1.26
COL12A1-208ENST00000486533 SOX21Q9Y651 276 aaPredicted RBP7.2□□□□□ -1.26
COL12A1-208ENST00000486533 V9GYV3 84 aa7.2□□□□□ -1.26
COL12A1-208ENST00000486533 IZUMO1RA6ND01 250 aa7.19□□□□□ -1.26
COL12A1-208ENST00000486533 NDUFB3O43676 98 aa7.19□□□□□ -1.26
COL12A1-208ENST00000486533 ACTL6BO94805 426 aa7.19□□□□□ -1.26
COL12A1-208ENST00000486533 CT45A6P0DMU7 189 aa7.19□□□□□ -1.26
COL12A1-208ENST00000486533 CT45A5P0DMU8 189 aa7.19□□□□□ -1.26
COL12A1-208ENST00000486533 CT45A7P0DMV0 189 aa7.19□□□□□ -1.26
COL12A1-208ENST00000486533 CBLN1P23435 193 aa7.19□□□□□ -1.26
COL12A1-208ENST00000486533 IER3P46695 156 aa7.19□□□□□ -1.26
COL12A1-208ENST00000486533 C10orf113Q5VZT2 155 aa7.19□□□□□ -1.26
COL12A1-208ENST00000486533 C19orf35Q6ZS72 473 aa7.19□□□□□ -1.26
COL12A1-208ENST00000486533 C9orf139Q6ZV77 190 aa7.19□□□□□ -1.26
COL12A1-208ENST00000486533 OR8I2Q8N0Y5 310 aa7.19□□□□□ -1.26
COL12A1-208ENST00000486533 OR5AN1Q8NGI8 311 aa7.19□□□□□ -1.26
COL12A1-208ENST00000486533 WIPF2Q8TF74 440 aaPredicted RBP7.19□□□□□ -1.26
COL12A1-208ENST00000486533 TNFRSF14Q92956 283 aa7.19□□□□□ -1.26
COL12A1-208ENST00000486533 KCNS1Q96KK3 526 aa7.19□□□□□ -1.26
COL12A1-208ENST00000486533 TBX15Q96SF7 602 aa7.19□□□□□ -1.26
COL12A1-208ENST00000486533 CCL13Q99616 98 aa7.19□□□□□ -1.26
COL12A1-208ENST00000486533 SLC25A33Q9BSK2 321 aa7.19□□□□□ -1.26
COL12A1-208ENST00000486533 KRTAP4-8Q9BYQ9 185 aa7.19□□□□□ -1.26
COL12A1-208ENST00000486533 NDUFA4L2Q9NRX3 87 aa7.19□□□□□ -1.26
COL12A1-208ENST00000486533 A0A1B0GV90 55 aa7.18□□□□□ -1.26
COL12A1-208ENST00000486533 TCRBV4S1A1TA0A5B7 111 aa7.18□□□□□ -1.26
COL12A1-208ENST00000486533 PGPEP1LA6NFU8 196 aa7.18□□□□□ -1.26
COL12A1-208ENST00000486533 K7EN84 100 aa7.18□□□□□ -1.26
COL12A1-208ENST00000486533 TOX4O94842 621 aa7.18□□□□□ -1.26
COL12A1-208ENST00000486533 LIPFP07098 398 aa7.18□□□□□ -1.26
COL12A1-208ENST00000486533 RNASE1P07998 156 aaKnown RBP7.18□□□□□ -1.26
COL12A1-208ENST00000486533 HIST1H1EP10412 219 aaKnown RBP7.18□□□□□ -1.26
COL12A1-208ENST00000486533 CRYBB3P26998 211 aa7.18□□□□□ -1.26
COL12A1-208ENST00000486533 LGALS7P47929 136 aa7.18□□□□□ -1.26
COL12A1-208ENST00000486533 NUTF2P61970 127 aaKnown RBP7.18□□□□□ -1.26
COL12A1-208ENST00000486533 SPATA31B1PQ5VZV4 182 aa7.18□□□□□ -1.26
COL12A1-208ENST00000486533 SHISA2Q6UWI4 295 aa7.18□□□□□ -1.26
COL12A1-208ENST00000486533 TEX43Q6ZNM6 134 aa7.18□□□□□ -1.26
COL12A1-208ENST00000486533 ATP5L2Q7Z4Y8 100 aa7.18□□□□□ -1.26
COL12A1-208ENST00000486533 S100A7AQ86SG5 101 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms