RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 SHANK2-AS3Q9BTD1 123 aa15.99■□□□□ 0.15
HPS3-206ENST00000486530 EPDR1Q9UM22 224 aa15.99■□□□□ 0.15
HPS3-206ENST00000486530 V9GYV3 84 aa15.99■□□□□ 0.15
HPS3-206ENST00000486530 ASH1LQ9NR48 2969 aaKnown RBP15.99■□□□□ 0.15
HPS3-206ENST00000486530 WI2-2373I1.2A0A1W2PRP0 233 aa15.99■□□□□ 0.15
HPS3-206ENST00000486530 PGPA6NDG6 321 aa15.99■□□□□ 0.15
HPS3-206ENST00000486530 ZNF98A6NK75 572 aa15.99■□□□□ 0.15
HPS3-206ENST00000486530 SLC17A3O00476 420 aa15.99■□□□□ 0.15
HPS3-206ENST00000486530 ISLRO14498 428 aa15.99■□□□□ 0.15
HPS3-206ENST00000486530 SCGB2A1O75556 95 aa15.99■□□□□ 0.15
HPS3-206ENST00000486530 COL8A1P27658 744 aa15.99■□□□□ 0.15
HPS3-206ENST00000486530 RPEL1Q2QD12 228 aa15.99■□□□□ 0.15
HPS3-206ENST00000486530 Q56UQ5 140 aa15.99■□□□□ 0.15
HPS3-206ENST00000486530 TMEM68Q96MH6 324 aa15.99■□□□□ 0.15
HPS3-206ENST00000486530 C12orf57Q99622 126 aa15.99■□□□□ 0.15
HPS3-206ENST00000486530 IL4P05112 153 aa15.98■□□□□ 0.15
HPS3-206ENST00000486530 SNRPCP09234 159 aaKnown RBP15.98■□□□□ 0.15
HPS3-206ENST00000486530 HIST1H1EP10412 219 aaKnown RBP15.98■□□□□ 0.15
HPS3-206ENST00000486530 C5orf17Q8NAS9 161 aa15.98■□□□□ 0.15
HPS3-206ENST00000486530 TMEM190Q8WZ59 177 aa15.98■□□□□ 0.15
HPS3-206ENST00000486530 S4R3C0 116 aa15.98■□□□□ 0.15
HPS3-206ENST00000486530 F8W735 103 aaPredicted RBP15.97■□□□□ 0.15
HPS3-206ENST00000486530 OR2J3O76001 311 aa15.97■□□□□ 0.15
HPS3-206ENST00000486530 NDUFB8O95169 186 aa15.97■□□□□ 0.15
HPS3-206ENST00000486530 SMIM6P0DI80 62 aa15.97■□□□□ 0.15
HPS3-206ENST00000486530 MGST1P10620 155 aaKnown RBP15.97■□□□□ 0.15
HPS3-206ENST00000486530 DSCR9P59020 149 aa15.97■□□□□ 0.15
HPS3-206ENST00000486530 TMEM183BQ1AE95 376 aa15.97■□□□□ 0.15
HPS3-206ENST00000486530 LINC00479Q96M42 142 aa15.97■□□□□ 0.15
HPS3-206ENST00000486530 Q9H3A6 140 aa15.97■□□□□ 0.15
HPS3-206ENST00000486530 LRRK2Q5S007 2527 aa15.97■□□□□ 0.15
HPS3-206ENST00000486530 TRAV40A0A0B4J280 105 aa15.97■□□□□ 0.15
HPS3-206ENST00000486530 ATP6V0E1O15342 81 aa15.97■□□□□ 0.15
HPS3-206ENST00000486530 FCGR2BP31994 310 aaPredicted RBP15.97■□□□□ 0.15
HPS3-206ENST00000486530 GNG5P63218 68 aa15.97■□□□□ 0.15
HPS3-206ENST00000486530 KLK9Q2XQG4 91 aa15.97■□□□□ 0.15
HPS3-206ENST00000486530 UNQ5815/PRO19632Q6UWF5 114 aa15.97■□□□□ 0.15
HPS3-206ENST00000486530 BPIFA4PQ86YQ2 179 aa15.97■□□□□ 0.15
HPS3-206ENST00000486530 TXN2Q99757 166 aa15.97■□□□□ 0.15
HPS3-206ENST00000486530 ATG101Q9BSB4 218 aa15.97■□□□□ 0.15
HPS3-206ENST00000486530 KLK9Q9UKQ9 250 aa15.97■□□□□ 0.15
HPS3-206ENST00000486530 RNF24Q9Y225 148 aa15.97■□□□□ 0.15
HPS3-206ENST00000486530 S100A9P06702 114 aaKnown RBP15.96■□□□□ 0.15
HPS3-206ENST00000486530 RPL15P61313 204 aaKnown RBP15.96■□□□□ 0.15
HPS3-206ENST00000486530 UBE2G1P62253 170 aa15.96■□□□□ 0.15
HPS3-206ENST00000486530 IBA57Q5T440 356 aaKnown RBP15.96■□□□□ 0.15
HPS3-206ENST00000486530 BAGE2Q86Y30 109 aa15.96■□□□□ 0.15
HPS3-206ENST00000486530 VN1R17PQ8TDU5 208 aa15.96■□□□□ 0.15
HPS3-206ENST00000486530 SMIM12Q96EX1 92 aa15.96■□□□□ 0.15
HPS3-206ENST00000486530 TMUB1Q9BVT8 246 aa15.96■□□□□ 0.15
HPS3-206ENST00000486530 RNASE7Q9H1E1 156 aaKnown RBP15.96■□□□□ 0.15
HPS3-206ENST00000486530 OTORQ9NRC9 128 aa15.96■□□□□ 0.15
HPS3-206ENST00000486530 FBXL7Q9UJT9 491 aa15.96■□□□□ 0.15
HPS3-206ENST00000486530 PITPNC1Q9UKF7 332 aa15.96■□□□□ 0.15
HPS3-206ENST00000486530 KLF12Q9Y4X4 402 aa15.96■□□□□ 0.15
HPS3-206ENST00000486530 SPG11Q96JI7 2443 aa15.96■□□□□ 0.14
HPS3-206ENST00000486530 ECSCRQ19T08 205 aa15.95■□□□□ 0.14
HPS3-206ENST00000486530 C5orf56Q8N8D9 126 aa15.95■□□□□ 0.14
HPS3-206ENST00000486530 ZNF586Q9NXT0 402 aa15.95■□□□□ 0.14
HPS3-206ENST00000486530 MOB4Q9Y3A3 225 aa15.95■□□□□ 0.14
HPS3-206ENST00000486530 IGHV3OR16-10A0A075B7F0 116 aa15.95■□□□□ 0.14
HPS3-206ENST00000486530 TRAV34A0A0B4J273 112 aa15.95■□□□□ 0.14
HPS3-206ENST00000486530 MSMBP08118 114 aa15.95■□□□□ 0.14
HPS3-206ENST00000486530 OR4F17Q8NGA8 305 aa15.95■□□□□ 0.14
HPS3-206ENST00000486530 CRYBG3Q68DQ2 2970 aa15.94■□□□□ 0.14
HPS3-206ENST00000486530 HIST3H2BBQ8N257 126 aa15.94■□□□□ 0.14
HPS3-206ENST00000486530 FMC1Q96HJ9 113 aa15.94■□□□□ 0.14
HPS3-206ENST00000486530 MEGF9Q9H1U4 602 aa15.94■□□□□ 0.14
HPS3-206ENST00000486530 TRAPPC1Q9Y5R8 145 aa15.94■□□□□ 0.14
HPS3-206ENST00000486530 H3BTX0 84 aa15.93■□□□□ 0.14
HPS3-206ENST00000486530 USF2Q15853 346 aaPredicted RBP15.93■□□□□ 0.14
HPS3-206ENST00000486530 FAM231DQ6ZW35 169 aa15.93■□□□□ 0.14
HPS3-206ENST00000486530 NHLRC2Q8NBF2 726 aa15.93■□□□□ 0.14
HPS3-206ENST00000486530 IFITM10A6NMD0 228 aa15.93■□□□□ 0.14
HPS3-206ENST00000486530 TCRAP04437 139 aa15.93■□□□□ 0.14
HPS3-206ENST00000486530 KRTAP10-9P60411 292 aa15.93■□□□□ 0.14
HPS3-206ENST00000486530 RPL19P84098 196 aaKnown RBP15.93■□□□□ 0.14
HPS3-206ENST00000486530 BRD3OSQ6XYD6 125 aa15.93■□□□□ 0.14
HPS3-206ENST00000486530 GAR1Q9NY12 217 aaKnown RBP15.93■□□□□ 0.14
HPS3-206ENST00000486530 RPH3ALQ9UNE2 315 aa15.93■□□□□ 0.14
HPS3-206ENST00000486530 OR2T8A6NH00 312 aa15.92■□□□□ 0.14
HPS3-206ENST00000486530 IGHV3-23P01764 117 aa15.92■□□□□ 0.14
HPS3-206ENST00000486530 IGLC2P0DOY2 106 aa15.92■□□□□ 0.14
HPS3-206ENST00000486530 S100A2P29034 98 aa15.92■□□□□ 0.14
HPS3-206ENST00000486530 TRBV19A0A075B6N1 114 aa15.91■□□□□ 0.14
HPS3-206ENST00000486530 SLC25A16P16260 332 aa15.91■□□□□ 0.14
HPS3-206ENST00000486530 GFI1BQ5VTD9 330 aa15.91■□□□□ 0.14
HPS3-206ENST00000486530 GPR82Q96P67 336 aa15.91■□□□□ 0.14
HPS3-206ENST00000486530 C7orf69Q9H7B7 122 aa15.91■□□□□ 0.14
HPS3-206ENST00000486530 FBN2P35556 2912 aa15.91■□□□□ 0.14
HPS3-206ENST00000486530 TRBV9A0A0B4J1U6 114 aa15.91■□□□□ 0.14
HPS3-206ENST00000486530 ZNF705GA8MUZ8 300 aaPredicted RBP15.91■□□□□ 0.14
HPS3-206ENST00000486530 B4DSR2 109 aa15.91■□□□□ 0.14
HPS3-206ENST00000486530 CTSGP08311 255 aa15.91■□□□□ 0.14
HPS3-206ENST00000486530 IGHV4-38-2P0DP08 117 aa15.91■□□□□ 0.14
HPS3-206ENST00000486530 C15orf32Q32M92 178 aa15.91■□□□□ 0.14
HPS3-206ENST00000486530 COA6Q5JTJ3 125 aaKnown RBP15.91■□□□□ 0.14
HPS3-206ENST00000486530 TMEM219Q86XT9 240 aa15.91■□□□□ 0.14
HPS3-206ENST00000486530 TMEM183AQ8IXX5 376 aa15.91■□□□□ 0.14
HPS3-206ENST00000486530 OR8I2Q8N0Y5 310 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 167.8 ms