RNA–Protein interactions for RNA: ENST00000486325.1

VTI1BP1-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 1, humanhuman

BASIC

Gene VTI1BP1, Length 700 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP1-201ENST00000486325 ZNF726P1Q15940 193 aa10.21□□□□□ -0.77
VTI1BP1-201ENST00000486325 RPEL1Q2QD12 228 aa10.21□□□□□ -0.77
VTI1BP1-201ENST00000486325 KHDC3LQ587J8 217 aa10.21□□□□□ -0.77
VTI1BP1-201ENST00000486325 KHDC1LQ5JSQ8 128 aa10.21□□□□□ -0.77
VTI1BP1-201ENST00000486325 LCN15Q6UWW0 184 aa10.21□□□□□ -0.77
VTI1BP1-201ENST00000486325 PQLC2Q6ZP29 291 aa10.21□□□□□ -0.77
VTI1BP1-201ENST00000486325 DPF1Q92782 380 aa10.21□□□□□ -0.77
VTI1BP1-201ENST00000486325 METTL26Q96S19 204 aa10.21□□□□□ -0.77
VTI1BP1-201ENST00000486325 MAP1LC3BQ9GZQ8 125 aa10.21□□□□□ -0.77
VTI1BP1-201ENST00000486325 SLC25A22Q9H936 323 aa10.21□□□□□ -0.77
VTI1BP1-201ENST00000486325 LINC00862A6NCI5 91 aa10.2□□□□□ -0.78
VTI1BP1-201ENST00000486325 K7EMT4 169 aa10.2□□□□□ -0.78
VTI1BP1-201ENST00000486325 TRBV12-3P01733 135 aa10.2□□□□□ -0.78
VTI1BP1-201ENST00000486325 CD28P10747 220 aa10.2□□□□□ -0.78
VTI1BP1-201ENST00000486325 NPPCP23582 126 aa10.2□□□□□ -0.78
VTI1BP1-201ENST00000486325 IL34Q6ZMJ4 242 aa10.2□□□□□ -0.78
VTI1BP1-201ENST00000486325 PCNPQ8WW12 178 aaKnown RBP10.2□□□□□ -0.78
VTI1BP1-201ENST00000486325 MARC2Q969Z3 335 aa10.2□□□□□ -0.78
VTI1BP1-201ENST00000486325 NARS2Q96I59 477 aaKnown RBP10.2□□□□□ -0.78
VTI1BP1-201ENST00000486325 SHANK2-AS3Q9BTD1 123 aa10.2□□□□□ -0.78
VTI1BP1-201ENST00000486325 SLC25A39Q9BZJ4 359 aaPredicted RBP10.2□□□□□ -0.78
VTI1BP1-201ENST00000486325 ZFAND3Q9H8U3 227 aa10.2□□□□□ -0.78
VTI1BP1-201ENST00000486325 ZFHX3Q15911 3703 aa10.19□□□□□ -0.78
VTI1BP1-201ENST00000486325 IGHV3-35A0A0C4DH35 117 aa10.19□□□□□ -0.78
VTI1BP1-201ENST00000486325 A0A1W2PS18 150 aa10.19□□□□□ -0.78
VTI1BP1-201ENST00000486325 LINC01619G3V211 115 aa10.19□□□□□ -0.78
VTI1BP1-201ENST00000486325 TAGLN2P37802 199 aaKnown RBP10.19□□□□□ -0.78
VTI1BP1-201ENST00000486325 PSMB3P49720 205 aa10.19□□□□□ -0.78
VTI1BP1-201ENST00000486325 SRSF2Q01130 221 aaKnown RBP10.19□□□□□ -0.78
VTI1BP1-201ENST00000486325 USF2Q15853 346 aaPredicted RBP10.19□□□□□ -0.78
VTI1BP1-201ENST00000486325 MIR17HGQ75NE6 70 aa10.19□□□□□ -0.78
VTI1BP1-201ENST00000486325 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.19□□□□□ -0.78
VTI1BP1-201ENST00000486325 KLHL30-AS1Q8NEE0 82 aa10.19□□□□□ -0.78
VTI1BP1-201ENST00000486325 OR1N2Q8NGR9 330 aa10.19□□□□□ -0.78
VTI1BP1-201ENST00000486325 C20orf24Q9BUV8 137 aa10.19□□□□□ -0.78
VTI1BP1-201ENST00000486325 UFC1Q9Y3C8 167 aa10.19□□□□□ -0.78
VTI1BP1-201ENST00000486325 TEP1Q99973 2627 aaKnown RBP10.19□□□□□ -0.78
VTI1BP1-201ENST00000486325 NIPBLQ6KC79 2804 aaeCLIP10.18□□□□□ -0.78
VTI1BP1-201ENST00000486325 ZNF320A2RRD8 509 aa10.18□□□□□ -0.78
VTI1BP1-201ENST00000486325 RAB19A4D1S5 217 aa10.18□□□□□ -0.78
VTI1BP1-201ENST00000486325 ZNF98A6NK75 572 aa10.18□□□□□ -0.78
VTI1BP1-201ENST00000486325 H3BRN7 92 aa10.18□□□□□ -0.78
VTI1BP1-201ENST00000486325 LGALS9O00182 355 aa10.18□□□□□ -0.78
VTI1BP1-201ENST00000486325 IFNA1P01562 189 aa10.18□□□□□ -0.78
VTI1BP1-201ENST00000486325 CRYBB3P26998 211 aa10.18□□□□□ -0.78
VTI1BP1-201ENST00000486325 BMI1P35226 326 aa10.18□□□□□ -0.78
VTI1BP1-201ENST00000486325 C1orf194Q5T5A4 169 aa10.18□□□□□ -0.78
VTI1BP1-201ENST00000486325 SPATA31B1PQ5VZV4 182 aa10.18□□□□□ -0.78
VTI1BP1-201ENST00000486325 BPIFA4PQ86YQ2 179 aa10.18□□□□□ -0.78
VTI1BP1-201ENST00000486325 OR11H1Q8NG94 326 aa10.18□□□□□ -0.78
VTI1BP1-201ENST00000486325 TMEM190Q8WZ59 177 aa10.18□□□□□ -0.78
VTI1BP1-201ENST00000486325 GPR82Q96P67 336 aa10.18□□□□□ -0.78
VTI1BP1-201ENST00000486325 UHRF2Q96PU4 802 aa10.18□□□□□ -0.78
VTI1BP1-201ENST00000486325 CITED2Q99967 270 aaPredicted RBP10.18□□□□□ -0.78
VTI1BP1-201ENST00000486325 OR51M1Q9H341 326 aa10.18□□□□□ -0.78
VTI1BP1-201ENST00000486325 TMEM167BQ9NRX6 74 aa10.18□□□□□ -0.78
VTI1BP1-201ENST00000486325 SETD2Q9BYW2 2564 aaPredicted RBP10.18□□□□□ -0.78
VTI1BP1-201ENST00000486325 IGHV4OR15-8A0A075B7B6 117 aa10.17□□□□□ -0.78
VTI1BP1-201ENST00000486325 A0A087WW49 117 aa10.17□□□□□ -0.78
VTI1BP1-201ENST00000486325 HMGB3O15347 200 aaKnown RBP10.17□□□□□ -0.78
VTI1BP1-201ENST00000486325 OR7C2O60412 319 aa10.17□□□□□ -0.78
VTI1BP1-201ENST00000486325 FGF8P55075 233 aaPredicted RBP10.17□□□□□ -0.78
VTI1BP1-201ENST00000486325 SSX7Q7RTT5 188 aa10.17□□□□□ -0.78
VTI1BP1-201ENST00000486325 REC114Q7Z4M0 266 aa10.17□□□□□ -0.78
VTI1BP1-201ENST00000486325 NDUFA11Q86Y39 141 aa10.17□□□□□ -0.78
VTI1BP1-201ENST00000486325 C11orf44Q8N8P7 122 aa10.17□□□□□ -0.78
VTI1BP1-201ENST00000486325 GRAMD2BQ96HH9 432 aa10.17□□□□□ -0.78
VTI1BP1-201ENST00000486325 ZNF414Q96IQ9 312 aa10.17□□□□□ -0.78
VTI1BP1-201ENST00000486325 FAM167A-AS1Q96KT0 104 aa10.17□□□□□ -0.78
VTI1BP1-201ENST00000486325 PAXXQ9BUH6 204 aa10.17□□□□□ -0.78
VTI1BP1-201ENST00000486325 TMEM231Q9H6L2 316 aa10.17□□□□□ -0.78
VTI1BP1-201ENST00000486325 TMEM14CQ9P0S9 112 aa10.17□□□□□ -0.78
VTI1BP1-201ENST00000486325 TRAV5A0A0B4J249 113 aa10.16□□□□□ -0.78
VTI1BP1-201ENST00000486325 ARL14EPLP0DKL9 152 aa10.16□□□□□ -0.78
VTI1BP1-201ENST00000486325 RPL7P18124 248 aaKnown RBP10.16□□□□□ -0.78
VTI1BP1-201ENST00000486325 GCHFRP30047 84 aa10.16□□□□□ -0.78
VTI1BP1-201ENST00000486325 HOXD3P31249 432 aaPredicted RBP10.16□□□□□ -0.78
VTI1BP1-201ENST00000486325 CCL20P78556 96 aa10.16□□□□□ -0.78
VTI1BP1-201ENST00000486325 KLF5Q13887 457 aaPredicted RBP10.16□□□□□ -0.78
VTI1BP1-201ENST00000486325 C1QL4Q86Z23 238 aa10.16□□□□□ -0.78
VTI1BP1-201ENST00000486325 IQCF2Q8IXL9 164 aa10.16□□□□□ -0.78
VTI1BP1-201ENST00000486325 OR8I2Q8N0Y5 310 aa10.16□□□□□ -0.78
VTI1BP1-201ENST00000486325 SLC25A2Q9BXI2 301 aa10.16□□□□□ -0.78
VTI1BP1-201ENST00000486325 SMDT1Q9H4I9 107 aa10.16□□□□□ -0.78
VTI1BP1-201ENST00000486325 MANBALQ9NQG1 85 aa10.16□□□□□ -0.78
VTI1BP1-201ENST00000486325 DAZ1Q9NQZ3 744 aaKnown RBP10.16□□□□□ -0.78
VTI1BP1-201ENST00000486325 U3KQE9 123 aa10.16□□□□□ -0.78
VTI1BP1-201ENST00000486325 A0A1B0GV50 99 aa10.15□□□□□ -0.78
VTI1BP1-201ENST00000486325 CCL24O00175 119 aa10.15□□□□□ -0.78
VTI1BP1-201ENST00000486325 BUB3O43684 328 aa10.15□□□□□ -0.78
VTI1BP1-201ENST00000486325 MYCNOSP40205 109 aa10.15□□□□□ -0.78
VTI1BP1-201ENST00000486325 PEA15Q15121 130 aa10.15□□□□□ -0.78
VTI1BP1-201ENST00000486325 AWAT1Q58HT5 328 aa10.15□□□□□ -0.78
VTI1BP1-201ENST00000486325 UNQ9165/PRO28630Q6UXU0 137 aa10.15□□□□□ -0.78
VTI1BP1-201ENST00000486325 C18orf65Q6ZTR6 163 aa10.15□□□□□ -0.78
VTI1BP1-201ENST00000486325 C8orf86Q6ZUL3 223 aa10.15□□□□□ -0.78
VTI1BP1-201ENST00000486325 OR4F17Q8NGA8 305 aa10.15□□□□□ -0.78
VTI1BP1-201ENST00000486325 SUN5Q8TC36 379 aa10.15□□□□□ -0.78
VTI1BP1-201ENST00000486325 FAM210AQ96ND0 272 aa10.15□□□□□ -0.78
VTI1BP1-201ENST00000486325 OR4F4Q96R69 305 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms