RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 LINC00476Q8WZB0 136 aa13.38□□□□□ -0.27
PRPF40A-209ENST00000486100 WDR12Q9GZL7 423 aaKnown RBP13.38□□□□□ -0.27
PRPF40A-209ENST00000486100 SLC45A2Q9UMX9 530 aa13.38□□□□□ -0.27
PRPF40A-209ENST00000486100 ZNF705EA8MWA4 302 aaPredicted RBP13.37□□□□□ -0.27
PRPF40A-209ENST00000486100 LYRM1O43325 122 aa13.37□□□□□ -0.27
PRPF40A-209ENST00000486100 MIFP14174 115 aa13.37□□□□□ -0.27
PRPF40A-209ENST00000486100 AKR1C1Q04828 323 aa13.37□□□□□ -0.27
PRPF40A-209ENST00000486100 IAH1Q2TAA2 248 aaPredicted RBP13.37□□□□□ -0.27
PRPF40A-209ENST00000486100 TMEM182Q6ZP80 229 aaPredicted RBP13.37□□□□□ -0.27
PRPF40A-209ENST00000486100 ACOT7LQ6ZUV0 252 aa13.37□□□□□ -0.27
PRPF40A-209ENST00000486100 CLEC5AQ9NY25 188 aa13.37□□□□□ -0.27
PRPF40A-209ENST00000486100 ALMS1Q8TCU4 4167 aa13.37□□□□□ -0.27
PRPF40A-209ENST00000486100 PMS2P5A8MQ11 134 aa13.36□□□□□ -0.27
PRPF40A-209ENST00000486100 SSSCA1O60232 199 aa13.36□□□□□ -0.27
PRPF40A-209ENST00000486100 HLA-DRB4P13762 266 aa13.36□□□□□ -0.27
PRPF40A-209ENST00000486100 GATA2P23769 480 aaPredicted RBP13.36□□□□□ -0.27
PRPF40A-209ENST00000486100 PSMB3P49720 205 aa13.36□□□□□ -0.27
PRPF40A-209ENST00000486100 PAX9P55771 341 aa13.36□□□□□ -0.27
PRPF40A-209ENST00000486100 LINC00052Q96N35 136 aa13.36□□□□□ -0.27
PRPF40A-209ENST00000486100 C1QTNF4Q9BXJ3 329 aa13.36□□□□□ -0.27
PRPF40A-209ENST00000486100 C20orf85Q9H1P6 137 aa13.36□□□□□ -0.27
PRPF40A-209ENST00000486100 HLA-DRB4X5D2U9 266 aa13.36□□□□□ -0.27
PRPF40A-209ENST00000486100 X6R8D5 127 aa13.36□□□□□ -0.27
PRPF40A-209ENST00000486100 IGHV4-28A0A0C4DH34 117 aa13.35□□□□□ -0.27
PRPF40A-209ENST00000486100 ZNF98A6NK75 572 aa13.35□□□□□ -0.27
PRPF40A-209ENST00000486100 SOCS3O14543 225 aa13.35□□□□□ -0.27
PRPF40A-209ENST00000486100 LY6G6CO95867 125 aa13.35□□□□□ -0.27
PRPF40A-209ENST00000486100 TCRBP04435 133 aa13.35□□□□□ -0.27
PRPF40A-209ENST00000486100 RBMY1A1P0DJD3 496 aaKnown RBP13.35□□□□□ -0.27
PRPF40A-209ENST00000486100 RBMY1CP0DJD4 496 aa13.35□□□□□ -0.27
PRPF40A-209ENST00000486100 ORM2P19652 201 aa13.35□□□□□ -0.27
PRPF40A-209ENST00000486100 S100A7P31151 101 aa13.35□□□□□ -0.27
PRPF40A-209ENST00000486100 RBMY1FQ15415 496 aaKnown RBP13.35□□□□□ -0.27
PRPF40A-209ENST00000486100 TMEM14EPQ6UXP3 125 aa13.35□□□□□ -0.27
PRPF40A-209ENST00000486100 ZBTB8BQ8NAP8 495 aaPredicted RBP13.35□□□□□ -0.27
PRPF40A-209ENST00000486100 GSKIPQ9P0R6 139 aa13.35□□□□□ -0.27
PRPF40A-209ENST00000486100 TBC1D24Q9ULP9 559 aa13.35□□□□□ -0.27
PRPF40A-209ENST00000486100 AGRNO00468 2067 aa13.35□□□□□ -0.27
PRPF40A-209ENST00000486100 SMCO3A2RU48 225 aa13.34□□□□□ -0.27
PRPF40A-209ENST00000486100 ISLRO14498 428 aa13.34□□□□□ -0.27
PRPF40A-209ENST00000486100 SCGB1D2O95969 90 aa13.34□□□□□ -0.27
PRPF40A-209ENST00000486100 GALR1P47211 349 aa13.34□□□□□ -0.27
PRPF40A-209ENST00000486100 TAS2R30P59541 319 aa13.34□□□□□ -0.27
PRPF40A-209ENST00000486100 ZNF846Q147U1 533 aa13.34□□□□□ -0.27
PRPF40A-209ENST00000486100 SAMD13Q5VXD3 122 aa13.34□□□□□ -0.27
PRPF40A-209ENST00000486100 HRH4Q9H3N8 390 aa13.34□□□□□ -0.27
PRPF40A-209ENST00000486100 IL5P05113 134 aa13.33□□□□□ -0.28
PRPF40A-209ENST00000486100 MEOX2P50222 304 aa13.33□□□□□ -0.28
PRPF40A-209ENST00000486100 DLK1P80370 383 aa13.33□□□□□ -0.28
PRPF40A-209ENST00000486100 GDF5OSQ5U4N7 250 aa13.33□□□□□ -0.28
PRPF40A-209ENST00000486100 FOXI2Q6ZQN5 318 aa13.33□□□□□ -0.28
PRPF40A-209ENST00000486100 CYP2G1PQ6ZSU1 146 aa13.33□□□□□ -0.28
PRPF40A-209ENST00000486100 OR10P1Q8NGE3 313 aa13.33□□□□□ -0.28
PRPF40A-209ENST00000486100 OR1B1Q8NGR6 318 aa13.33□□□□□ -0.28
PRPF40A-209ENST00000486100 CCDC32Q9BV29 185 aa13.33□□□□□ -0.28
PRPF40A-209ENST00000486100 TMEM147Q9BVK8 224 aa13.33□□□□□ -0.28
PRPF40A-209ENST00000486100 SLC25A32Q9H2D1 315 aa13.33□□□□□ -0.28
PRPF40A-209ENST00000486100 SAV1Q9H4B6 383 aaPredicted RBP13.33□□□□□ -0.28
PRPF40A-209ENST00000486100 SLC25A22Q9H936 323 aa13.33□□□□□ -0.28
PRPF40A-209ENST00000486100 XCL2Q9UBD3 114 aa13.33□□□□□ -0.28
PRPF40A-209ENST00000486100 EPPK1P58107 5090 aaKnown RBP13.32□□□□□ -0.28
PRPF40A-209ENST00000486100 FNDC10F2Z333 226 aa13.32□□□□□ -0.28
PRPF40A-209ENST00000486100 TSC22D2O75157 780 aa13.32□□□□□ -0.28
PRPF40A-209ENST00000486100 CCNKO75909 580 aa13.32□□□□□ -0.28
PRPF40A-209ENST00000486100 METTL15P1P0C7V9 234 aa13.32□□□□□ -0.28
PRPF40A-209ENST00000486100 DEFB1P60022 68 aa13.32□□□□□ -0.28
PRPF40A-209ENST00000486100 SPATA31B1PQ5VZV4 182 aa13.32□□□□□ -0.28
PRPF40A-209ENST00000486100 GSG1LQ6UXU4 331 aa13.32□□□□□ -0.28
PRPF40A-209ENST00000486100 CLUHP3Q96NS8 147 aa13.32□□□□□ -0.28
PRPF40A-209ENST00000486100 GPR82Q96P67 336 aa13.32□□□□□ -0.28
PRPF40A-209ENST00000486100 RSG1Q9BU20 258 aa13.32□□□□□ -0.28
PRPF40A-209ENST00000486100 NPVFQ9HCQ7 196 aa13.32□□□□□ -0.28
PRPF40A-209ENST00000486100 TRAV6A0A075B6T7 132 aa13.31□□□□□ -0.28
PRPF40A-209ENST00000486100 ELOA3CA0A087WX78 387 aaPredicted RBP13.31□□□□□ -0.28
PRPF40A-209ENST00000486100 MBPP02686 304 aaPredicted RBP13.31□□□□□ -0.28
PRPF40A-209ENST00000486100 RRAS2P62070 204 aaPredicted RBP13.31□□□□□ -0.28
PRPF40A-209ENST00000486100 SELENOTP62341 195 aa13.31□□□□□ -0.28
PRPF40A-209ENST00000486100 C16orf92Q96LL3 132 aa13.31□□□□□ -0.28
PRPF40A-209ENST00000486100 C17orf77Q96MU5 243 aa13.31□□□□□ -0.28
PRPF40A-209ENST00000486100 RCL1Q9Y2P8 373 aaKnown RBP13.31□□□□□ -0.28
PRPF40A-209ENST00000486100 C7orf66A4D0T2 115 aa13.3□□□□□ -0.28
PRPF40A-209ENST00000486100 C11orf94C9JXX5 98 aa13.3□□□□□ -0.28
PRPF40A-209ENST00000486100 IGKV3-20P01619 116 aa13.3□□□□□ -0.28
PRPF40A-209ENST00000486100 PLP1P60201 277 aa13.3□□□□□ -0.28
PRPF40A-209ENST00000486100 EBLN2Q6P2I7 272 aa13.3□□□□□ -0.28
PRPF40A-209ENST00000486100 ZNF431Q8TF32 576 aaPredicted RBP13.3□□□□□ -0.28
PRPF40A-209ENST00000486100 C2CD4CQ8TF44 421 aa13.3□□□□□ -0.28
PRPF40A-209ENST00000486100 SLC25A39Q9BZJ4 359 aaPredicted RBP13.3□□□□□ -0.28
PRPF40A-209ENST00000486100 RPRMQ9NS64 109 aa13.3□□□□□ -0.28
PRPF40A-209ENST00000486100 NUDT15Q9NV35 164 aa13.3□□□□□ -0.28
PRPF40A-209ENST00000486100 H3BRN7 92 aa13.29□□□□□ -0.28
PRPF40A-209ENST00000486100 CCSO14618 274 aa13.29□□□□□ -0.28
PRPF40A-209ENST00000486100 HYPMO75409 117 aa13.29□□□□□ -0.28
PRPF40A-209ENST00000486100 RAP2BP61225 183 aa13.29□□□□□ -0.28
PRPF40A-209ENST00000486100 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.29□□□□□ -0.28
PRPF40A-209ENST00000486100 OR4B1Q8NGF8 309 aa13.29□□□□□ -0.28
PRPF40A-209ENST00000486100 SEC22CQ9BRL7 303 aa13.29□□□□□ -0.28
PRPF40A-209ENST00000486100 SHANK2-AS3Q9BTD1 123 aa13.29□□□□□ -0.28
PRPF40A-209ENST00000486100 DOK5Q9P104 306 aa13.29□□□□□ -0.28
PRPF40A-209ENST00000486100 MGAT4CQ9UBM8 478 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms