RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 INSP01308 110 aa4.4□□□□□ -1.71
SMC4-217ENST00000485867 RLN1P04808 185 aa4.4□□□□□ -1.71
SMC4-217ENST00000485867 MT1HL1P0DM35 61 aa4.4□□□□□ -1.71
SMC4-217ENST00000485867 RFX2P48378 723 aa4.4□□□□□ -1.71
SMC4-217ENST00000485867 ERHP84090 104 aaKnown RBP4.4□□□□□ -1.71
SMC4-217ENST00000485867 ANXA2RQ3ZCQ2 193 aa4.4□□□□□ -1.71
SMC4-217ENST00000485867 SPINK9Q5DT21 86 aa4.4□□□□□ -1.71
SMC4-217ENST00000485867 EBLN2Q6P2I7 272 aa4.4□□□□□ -1.71
SMC4-217ENST00000485867 TMEM17Q86X19 198 aa4.4□□□□□ -1.71
SMC4-217ENST00000485867 ZBTB8BQ8NAP8 495 aaPredicted RBP4.4□□□□□ -1.71
SMC4-217ENST00000485867 OR10J6PQ8NGY7 276 aa4.4□□□□□ -1.71
SMC4-217ENST00000485867 COQ8AQ8NI60 647 aa4.4□□□□□ -1.71
SMC4-217ENST00000485867 TMEM203Q969S6 136 aa4.4□□□□□ -1.71
SMC4-217ENST00000485867 A0A096LPF7 62 aa4.39□□□□□ -1.71
SMC4-217ENST00000485867 LRCOL1A6NCL2 159 aa4.39□□□□□ -1.71
SMC4-217ENST00000485867 M0R2Z0 102 aa4.39□□□□□ -1.71
SMC4-217ENST00000485867 GSTZ1O43708 216 aaPredicted RBP4.39□□□□□ -1.71
SMC4-217ENST00000485867 ARL6IP5O75915 188 aa4.39□□□□□ -1.71
SMC4-217ENST00000485867 IL4P05112 153 aa4.39□□□□□ -1.71
SMC4-217ENST00000485867 IGLC1P0CG04 106 aa4.39□□□□□ -1.71
SMC4-217ENST00000485867 RNASE2P10153 161 aaKnown RBP4.39□□□□□ -1.71
SMC4-217ENST00000485867 PRB4P10163 310 aaPredicted RBP4.39□□□□□ -1.71
SMC4-217ENST00000485867 CALRP27797 417 aaKnown RBP4.39□□□□□ -1.71
SMC4-217ENST00000485867 ID1P41134 155 aa4.39□□□□□ -1.71
SMC4-217ENST00000485867 OPRK1P41145 380 aa4.39□□□□□ -1.71
SMC4-217ENST00000485867 GNG2P59768 71 aa4.39□□□□□ -1.71
SMC4-217ENST00000485867 HSPE1P61604 102 aaKnown RBP4.39□□□□□ -1.71
SMC4-217ENST00000485867 B2MP61769 119 aa4.39□□□□□ -1.71
SMC4-217ENST00000485867 DHODHQ02127 395 aa4.39□□□□□ -1.71
SMC4-217ENST00000485867 SPINK13Q1W4C9 94 aa4.39□□□□□ -1.71
SMC4-217ENST00000485867 AHSA2Q719I0 299 aa4.39□□□□□ -1.71
SMC4-217ENST00000485867 BAP18Q8IXM2 172 aa4.39□□□□□ -1.71
SMC4-217ENST00000485867 LINC00612Q8N6U2 182 aa4.39□□□□□ -1.71
SMC4-217ENST00000485867 ZNF555Q8NEP9 628 aa4.39□□□□□ -1.71
SMC4-217ENST00000485867 BEST4Q8NFU0 473 aa4.39□□□□□ -1.71
SMC4-217ENST00000485867 GPR146Q96CH1 333 aa4.39□□□□□ -1.71
SMC4-217ENST00000485867 C9orf16Q9BUW7 83 aa4.39□□□□□ -1.71
SMC4-217ENST00000485867 ATG5Q9H1Y0 275 aa4.39□□□□□ -1.71
SMC4-217ENST00000485867 NOP10Q9NPE3 64 aaKnown RBP4.39□□□□□ -1.71
SMC4-217ENST00000485867 DOK5Q9P104 306 aa4.39□□□□□ -1.71
SMC4-217ENST00000485867 PSORS1C1Q9UIG5 152 aa4.39□□□□□ -1.71
SMC4-217ENST00000485867 DAPK2Q9UIK4 370 aa4.39□□□□□ -1.71
SMC4-217ENST00000485867 TIMM8BQ9Y5J9 83 aaPredicted RBP4.39□□□□□ -1.71
SMC4-217ENST00000485867 TRAV30A0A087WSZ9 112 aa4.38□□□□□ -1.71
SMC4-217ENST00000485867 INS-IGF2F8WCM5 200 aa4.38□□□□□ -1.71
SMC4-217ENST00000485867 RHODO00212 210 aa4.38□□□□□ -1.71
SMC4-217ENST00000485867 PGLYRP1O75594 196 aaPredicted RBP4.38□□□□□ -1.71
SMC4-217ENST00000485867 ELK1P19419 428 aa4.38□□□□□ -1.71
SMC4-217ENST00000485867 SNCAP37840 140 aa4.38□□□□□ -1.71
SMC4-217ENST00000485867 RPL5P46777 297 aaKnown RBP4.38□□□□□ -1.71
SMC4-217ENST00000485867 OR10A3P58181 314 aa4.38□□□□□ -1.71
SMC4-217ENST00000485867 YPEL3P61236 119 aaPredicted RBP4.38□□□□□ -1.71
SMC4-217ENST00000485867 RPS25P62851 125 aaKnown RBP4.38□□□□□ -1.71
SMC4-217ENST00000485867 LAIR2Q6ISS4 152 aa4.38□□□□□ -1.71
SMC4-217ENST00000485867 TMED4Q7Z7H5 227 aa4.38□□□□□ -1.71
SMC4-217ENST00000485867 CCDC28AQ8IWP9 274 aa4.38□□□□□ -1.71
SMC4-217ENST00000485867 TSPAN14Q8NG11 270 aa4.38□□□□□ -1.71
SMC4-217ENST00000485867 OR11H7Q8NGC8 314 aa4.38□□□□□ -1.71
SMC4-217ENST00000485867 OR1S2Q8NGQ3 325 aa4.38□□□□□ -1.71
SMC4-217ENST00000485867 OR4A16Q8NH70 328 aa4.38□□□□□ -1.71
SMC4-217ENST00000485867 Q8WTZ3 238 aa4.38□□□□□ -1.71
SMC4-217ENST00000485867 C16orf74Q96GX8 76 aa4.38□□□□□ -1.71
SMC4-217ENST00000485867 VSIG2Q96IQ7 327 aa4.38□□□□□ -1.71
SMC4-217ENST00000485867 SEC22AQ96IW7 307 aa4.38□□□□□ -1.71
SMC4-217ENST00000485867 MND1Q9BWT6 205 aa4.38□□□□□ -1.71
SMC4-217ENST00000485867 KLK11Q9UBX7 282 aa4.38□□□□□ -1.71
SMC4-217ENST00000485867 LSM2Q9Y333 95 aaKnown RBP4.38□□□□□ -1.71
SMC4-217ENST00000485867 IFITM5A6NNB3 132 aa4.37□□□□□ -1.71
SMC4-217ENST00000485867 ISLRO14498 428 aa4.37□□□□□ -1.71
SMC4-217ENST00000485867 RS1O15537 224 aa4.37□□□□□ -1.71
SMC4-217ENST00000485867 IGKV1-39P01597 117 aa4.37□□□□□ -1.71
SMC4-217ENST00000485867 IGKV1D-39P04432 117 aa4.37□□□□□ -1.71
SMC4-217ENST00000485867 RND2P52198 227 aa4.37□□□□□ -1.71
SMC4-217ENST00000485867 TAS2R60P59551 318 aa4.37□□□□□ -1.71
SMC4-217ENST00000485867 HERV-K104P61576 105 aa4.37□□□□□ -1.71
SMC4-217ENST00000485867 SPHARQ15513 63 aa4.37□□□□□ -1.71
SMC4-217ENST00000485867 SCXQ7RTU7 201 aa4.37□□□□□ -1.71
SMC4-217ENST00000485867 H2BFWTQ7Z2G1 175 aa4.37□□□□□ -1.71
SMC4-217ENST00000485867 SLC35G3Q8N808 338 aa4.37□□□□□ -1.71
SMC4-217ENST00000485867 Q8N814 137 aa4.37□□□□□ -1.71
SMC4-217ENST00000485867 OR6F1Q8NGZ6 308 aa4.37□□□□□ -1.71
SMC4-217ENST00000485867 RNASE8Q8TDE3 154 aaKnown RBP4.37□□□□□ -1.71
SMC4-217ENST00000485867 UFD1Q92890 307 aa4.37□□□□□ -1.71
SMC4-217ENST00000485867 BORCS5Q969J3 196 aa4.37□□□□□ -1.71
SMC4-217ENST00000485867 LINC00467Q9BRT7 94 aa4.37□□□□□ -1.71
SMC4-217ENST00000485867 RPRMQ9NS64 109 aa4.37□□□□□ -1.71
SMC4-217ENST00000485867 FKBP14Q9NWM8 211 aa4.37□□□□□ -1.71
SMC4-217ENST00000485867 TRAV12-2A0A075B6T6 113 aa4.36□□□□□ -1.71
SMC4-217ENST00000485867 TRAV9-2A0A087WT02 112 aa4.36□□□□□ -1.71
SMC4-217ENST00000485867 CASQ2O14958 399 aaPredicted RBP4.36□□□□□ -1.71
SMC4-217ENST00000485867 ADAP1O75689 374 aa4.36□□□□□ -1.71
SMC4-217ENST00000485867 GAGE7O76087 117 aa4.36□□□□□ -1.71
SMC4-217ENST00000485867 GAS8-AS1O95177 125 aa4.36□□□□□ -1.71
SMC4-217ENST00000485867 GAGE12FP0CL80 117 aa4.36□□□□□ -1.71
SMC4-217ENST00000485867 GAGE12GP0CL81 117 aa4.36□□□□□ -1.71
SMC4-217ENST00000485867 GAGE12IP0CL82 117 aa4.36□□□□□ -1.71
SMC4-217ENST00000485867 OR10J1P30954 320 aa4.36□□□□□ -1.71
SMC4-217ENST00000485867 NUP62P37198 522 aaPredicted RBP4.36□□□□□ -1.71
SMC4-217ENST00000485867 HSPA13P48723 471 aa4.36□□□□□ -1.71
SMC4-217ENST00000485867 CNN1P51911 297 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms