RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 LRTM2Q8N967 370 aa12.35□□□□□ -0.43
SMC4-216ENST00000485645 LINC00052Q96N35 136 aa12.35□□□□□ -0.43
SMC4-216ENST00000485645 RNF126Q9BV68 326 aa12.35□□□□□ -0.43
SMC4-216ENST00000485645 SNRPGP15A8MWD9 76 aa12.34□□□□□ -0.43
SMC4-216ENST00000485645 PITX3O75364 302 aa12.34□□□□□ -0.43
SMC4-216ENST00000485645 SFT2D2O95562 160 aa12.34□□□□□ -0.43
SMC4-216ENST00000485645 IAPPP10997 89 aa12.34□□□□□ -0.43
SMC4-216ENST00000485645 BTCP35070 178 aa12.34□□□□□ -0.43
SMC4-216ENST00000485645 C1orf194Q5T5A4 169 aa12.34□□□□□ -0.43
SMC4-216ENST00000485645 PPP1R14BQ96C90 147 aa12.34□□□□□ -0.43
SMC4-216ENST00000485645 PAIP2BQ9ULR5 123 aaKnown RBP12.34□□□□□ -0.43
SMC4-216ENST00000485645 HECTD4Q9Y4D8 3996 aa12.34□□□□□ -0.43
SMC4-216ENST00000485645 DEFB131BA0A096LNP1 70 aa12.33□□□□□ -0.44
SMC4-216ENST00000485645 IGKV3-20P01619 116 aa12.33□□□□□ -0.44
SMC4-216ENST00000485645 PSMB3P49720 205 aa12.33□□□□□ -0.44
SMC4-216ENST00000485645 GDF5OSQ5U4N7 250 aa12.33□□□□□ -0.44
SMC4-216ENST00000485645 ZNF767PQ75MW2 155 aa12.33□□□□□ -0.44
SMC4-216ENST00000485645 COQ8AQ8NI60 647 aa12.33□□□□□ -0.44
SMC4-216ENST00000485645 NEU1Q99519 415 aa12.33□□□□□ -0.44
SMC4-216ENST00000485645 TRGV9Q99603 122 aa12.33□□□□□ -0.44
SMC4-216ENST00000485645 CCDC32Q9BV29 185 aa12.33□□□□□ -0.44
SMC4-216ENST00000485645 WDR12Q9GZL7 423 aaKnown RBP12.33□□□□□ -0.44
SMC4-216ENST00000485645 SAV1Q9H4B6 383 aaPredicted RBP12.33□□□□□ -0.44
SMC4-216ENST00000485645 PLA2G10O15496 165 aa12.32□□□□□ -0.44
SMC4-216ENST00000485645 MED6O75586 246 aa12.32□□□□□ -0.44
SMC4-216ENST00000485645 SLC25A6P12236 298 aa12.32□□□□□ -0.44
SMC4-216ENST00000485645 DEFB1P60022 68 aa12.32□□□□□ -0.44
SMC4-216ENST00000485645 OR2F1Q13607 317 aa12.32□□□□□ -0.44
SMC4-216ENST00000485645 ZNF705AQ6ZN79 300 aaPredicted RBP12.32□□□□□ -0.44
SMC4-216ENST00000485645 FOXI2Q6ZQN5 318 aa12.32□□□□□ -0.44
SMC4-216ENST00000485645 OR8I2Q8N0Y5 310 aa12.32□□□□□ -0.44
SMC4-216ENST00000485645 FLVCR2Q9UPI3 526 aa12.32□□□□□ -0.44
SMC4-216ENST00000485645 TMED3Q9Y3Q3 217 aa12.32□□□□□ -0.44
SMC4-216ENST00000485645 C9orf170A2RU37 121 aa12.31□□□□□ -0.44
SMC4-216ENST00000485645 TMEM189A5PLL7 270 aa12.31□□□□□ -0.44
SMC4-216ENST00000485645 ZNF705FA8MVS1 300 aaPredicted RBP12.31□□□□□ -0.44
SMC4-216ENST00000485645 SOCS3O14543 225 aa12.31□□□□□ -0.44
SMC4-216ENST00000485645 AMBPP02760 352 aa12.31□□□□□ -0.44
SMC4-216ENST00000485645 ZNF705DP0CH99 300 aaPredicted RBP12.31□□□□□ -0.44
SMC4-216ENST00000485645 ZNF705BP0CI00 300 aaPredicted RBP12.31□□□□□ -0.44
SMC4-216ENST00000485645 FXYD7P58549 80 aa12.31□□□□□ -0.44
SMC4-216ENST00000485645 RPP30P78346 268 aaKnown RBP12.31□□□□□ -0.44
SMC4-216ENST00000485645 OR4B1Q8NGF8 309 aa12.31□□□□□ -0.44
SMC4-216ENST00000485645 S100ZQ8WXG8 99 aa12.31□□□□□ -0.44
SMC4-216ENST00000485645 CIB3Q96Q77 187 aaPredicted RBP12.31□□□□□ -0.44
SMC4-216ENST00000485645 IGHV3OR16-12A0A075B7B8 117 aa12.3□□□□□ -0.44
SMC4-216ENST00000485645 SMIM9A6NGZ8 99 aa12.3□□□□□ -0.44
SMC4-216ENST00000485645 LYRM1O43325 122 aa12.3□□□□□ -0.44
SMC4-216ENST00000485645 CFDP00746 253 aaPredicted RBP12.3□□□□□ -0.44
SMC4-216ENST00000485645 SPART-AS1P0CW21 52 aa12.3□□□□□ -0.44
SMC4-216ENST00000485645 SAMD13Q5VXD3 122 aa12.3□□□□□ -0.44
SMC4-216ENST00000485645 SPATA31B1PQ5VZV4 182 aa12.3□□□□□ -0.44
SMC4-216ENST00000485645 GGNBP1Q5YKI7 109 aa12.3□□□□□ -0.44
SMC4-216ENST00000485645 THAP8Q8NA92 274 aa12.3□□□□□ -0.44
SMC4-216ENST00000485645 CLUHP3Q96NS8 147 aa12.3□□□□□ -0.44
SMC4-216ENST00000485645 NDUFAF3Q9BU61 184 aa12.3□□□□□ -0.44
SMC4-216ENST00000485645 PTTG2Q9NZH5 202 aa12.3□□□□□ -0.44
SMC4-216ENST00000485645 IGKV1OR2-108A0A075B7D4 117 aa12.29□□□□□ -0.44
SMC4-216ENST00000485645 ISLRO14498 428 aa12.29□□□□□ -0.44
SMC4-216ENST00000485645 OR4E1P0C645 316 aa12.29□□□□□ -0.44
SMC4-216ENST00000485645 EMP1P54849 157 aa12.29□□□□□ -0.44
SMC4-216ENST00000485645 EBLN2Q6P2I7 272 aa12.29□□□□□ -0.44
SMC4-216ENST00000485645 ZNF709Q8N972 641 aa12.29□□□□□ -0.44
SMC4-216ENST00000485645 BATF3Q9NR55 127 aa12.29□□□□□ -0.44
SMC4-216ENST00000485645 RFNGQ9Y644 331 aa12.29□□□□□ -0.44
SMC4-216ENST00000485645 WRBO00258 174 aa12.28□□□□□ -0.44
SMC4-216ENST00000485645 SYNGR2O43760 224 aa12.28□□□□□ -0.44
SMC4-216ENST00000485645 HOXB5P09067 269 aa12.28□□□□□ -0.44
SMC4-216ENST00000485645 P0DMU3 169 aa12.28□□□□□ -0.44
SMC4-216ENST00000485645 FAM231AP0DMU4 169 aa12.28□□□□□ -0.44
SMC4-216ENST00000485645 FAM231CP0DMU5 169 aa12.28□□□□□ -0.44
SMC4-216ENST00000485645 ANXA7P20073 488 aaKnown RBP12.28□□□□□ -0.44
SMC4-216ENST00000485645 MEOX2P50222 304 aa12.28□□□□□ -0.44
SMC4-216ENST00000485645 PSG9Q00887 426 aa12.28□□□□□ -0.44
SMC4-216ENST00000485645 GSG1LQ6UXU4 331 aa12.28□□□□□ -0.44
SMC4-216ENST00000485645 C16orf92Q96LL3 132 aa12.28□□□□□ -0.44
SMC4-216ENST00000485645 MAGT1Q9H0U3 335 aa12.28□□□□□ -0.44
SMC4-216ENST00000485645 GALR1P47211 349 aa12.27□□□□□ -0.45
SMC4-216ENST00000485645 PAX9P55771 341 aa12.27□□□□□ -0.45
SMC4-216ENST00000485645 C4orf46Q504U0 113 aa12.27□□□□□ -0.45
SMC4-216ENST00000485645 FAM78BQ5VT40 261 aa12.27□□□□□ -0.45
SMC4-216ENST00000485645 POM121L12Q8N7R1 296 aa12.27□□□□□ -0.45
SMC4-216ENST00000485645 SCRT1Q9BWW7 348 aa12.27□□□□□ -0.45
SMC4-216ENST00000485645 SLC35B3Q9H1N7 401 aa12.27□□□□□ -0.45
SMC4-216ENST00000485645 SLC25A22Q9H936 323 aa12.27□□□□□ -0.45
SMC4-216ENST00000485645 RPRMQ9NS64 109 aa12.27□□□□□ -0.45
SMC4-216ENST00000485645 SLC45A2Q9UMX9 530 aa12.27□□□□□ -0.45
SMC4-216ENST00000485645 GOLT1BQ9Y3E0 138 aa12.27□□□□□ -0.45
SMC4-216ENST00000485645 HERC2O95714 4834 aa12.27□□□□□ -0.45
SMC4-216ENST00000485645 A0A0J9YX75 114 aa12.26□□□□□ -0.45
SMC4-216ENST00000485645 TEX48A0A1B0GUV7 120 aa12.26□□□□□ -0.45
SMC4-216ENST00000485645 PRSS46E5RG02 174 aa12.26□□□□□ -0.45
SMC4-216ENST00000485645 F6UB75 175 aa12.26□□□□□ -0.45
SMC4-216ENST00000485645 TCRBP04435 133 aa12.26□□□□□ -0.45
SMC4-216ENST00000485645 SPANXN5Q5MJ07 72 aa12.26□□□□□ -0.45
SMC4-216ENST00000485645 BPIFCQ8NFQ6 507 aa12.26□□□□□ -0.45
SMC4-216ENST00000485645 C20orf85Q9H1P6 137 aa12.26□□□□□ -0.45
SMC4-216ENST00000485645 SLC25A32Q9H2D1 315 aa12.26□□□□□ -0.45
SMC4-216ENST00000485645 DNAH2Q9P225 4427 aa12.25□□□□□ -0.45
SMC4-216ENST00000485645 ZNF98A6NK75 572 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms