RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 CTSGP08311 255 aa13.04□□□□□ -0.32
CTSA-207ENST00000484855 SNRPCP09234 159 aaKnown RBP13.04□□□□□ -0.32
CTSA-207ENST00000484855 LINC01551Q86U37 167 aa13.04□□□□□ -0.32
CTSA-207ENST00000484855 BLNKQ8WV28 456 aa13.04□□□□□ -0.32
CTSA-207ENST00000484855 SHANK2-AS3Q9BTD1 123 aa13.04□□□□□ -0.32
CTSA-207ENST00000484855 CTDSP1Q9GZU7 261 aa13.04□□□□□ -0.32
CTSA-207ENST00000484855 TMEM242Q9NWH2 141 aa13.04□□□□□ -0.32
CTSA-207ENST00000484855 TRBV20OR9-2A0A075B6H5 130 aa13.03□□□□□ -0.32
CTSA-207ENST00000484855 GPR183P32249 361 aa13.03□□□□□ -0.32
CTSA-207ENST00000484855 RPL35P42766 123 aaKnown RBP13.03□□□□□ -0.32
CTSA-207ENST00000484855 USF2Q15853 346 aaPredicted RBP13.03□□□□□ -0.32
CTSA-207ENST00000484855 EEF1AKMT3Q96AZ1 226 aa13.03□□□□□ -0.32
CTSA-207ENST00000484855 CHRDL1Q9BU40 450 aa13.03□□□□□ -0.32
CTSA-207ENST00000484855 ELOVL1Q9BW60 279 aa13.03□□□□□ -0.32
CTSA-207ENST00000484855 CREBBPQ92793 2442 aa13.03□□□□□ -0.32
CTSA-207ENST00000484855 CLDN34H7C241 214 aa13.03□□□□□ -0.32
CTSA-207ENST00000484855 NBEAP1P0C6P0 100 aa13.03□□□□□ -0.32
CTSA-207ENST00000484855 BLCAPP62952 87 aa13.03□□□□□ -0.32
CTSA-207ENST00000484855 S100A7AQ86SG5 101 aa13.03□□□□□ -0.32
CTSA-207ENST00000484855 WFDC11Q8NEX6 87 aa13.03□□□□□ -0.32
CTSA-207ENST00000484855 TMEM14CQ9P0S9 112 aa13.03□□□□□ -0.32
CTSA-207ENST00000484855 PGPEP1LA6NFU8 196 aa13.02□□□□□ -0.33
CTSA-207ENST00000484855 ZNF343Q6P1L6 599 aa13.02□□□□□ -0.33
CTSA-207ENST00000484855 ZNF600Q6ZNG1 722 aa13.02□□□□□ -0.33
CTSA-207ENST00000484855 ZNF329Q86UD4 541 aa13.02□□□□□ -0.33
CTSA-207ENST00000484855 YPEL4Q96NS1 127 aa13.02□□□□□ -0.33
CTSA-207ENST00000484855 AURKAIP1Q9NWT8 199 aaPredicted RBP13.02□□□□□ -0.33
CTSA-207ENST00000484855 GAR1Q9NY12 217 aaKnown RBP13.02□□□□□ -0.33
CTSA-207ENST00000484855 URGCP-MRPS24S4R325 110 aa13.02□□□□□ -0.33
CTSA-207ENST00000484855 C9JCJ5 164 aa13.01□□□□□ -0.33
CTSA-207ENST00000484855 ADMP35318 185 aa13.01□□□□□ -0.33
CTSA-207ENST00000484855 IER3P46695 156 aa13.01□□□□□ -0.33
CTSA-207ENST00000484855 RANP62826 216 aaKnown RBP13.01□□□□□ -0.33
CTSA-207ENST00000484855 C9orf139Q6ZV77 190 aa13.01□□□□□ -0.33
CTSA-207ENST00000484855 C2CD4CQ8TF44 421 aa13.01□□□□□ -0.33
CTSA-207ENST00000484855 CCDC140Q96MF4 163 aa13.01□□□□□ -0.33
CTSA-207ENST00000484855 TRBV7-1A0A0A6YYK4 115 aa13.01□□□□□ -0.33
CTSA-207ENST00000484855 HELTA6NFD8 242 aa13.01□□□□□ -0.33
CTSA-207ENST00000484855 OR5R1Q8NH85 324 aa13.01□□□□□ -0.33
CTSA-207ENST00000484855 NOL4LQ96MY1 436 aaPredicted RBP13.01□□□□□ -0.33
CTSA-207ENST00000484855 ZNF469Q96JG9 3925 aaPredicted RBP13□□□□□ -0.33
CTSA-207ENST00000484855 FAM223BA6NKX1 122 aa13□□□□□ -0.33
CTSA-207ENST00000484855 TRGV3P03979 118 aa13□□□□□ -0.33
CTSA-207ENST00000484855 CLEC3BP05452 202 aa13□□□□□ -0.33
CTSA-207ENST00000484855 CRYBA1P05813 215 aa13□□□□□ -0.33
CTSA-207ENST00000484855 ATP5G2Q06055 141 aa13□□□□□ -0.33
CTSA-207ENST00000484855 ELOBQ15370 118 aa13□□□□□ -0.33
CTSA-207ENST00000484855 CLEC19AQ6UXS0 136 aa13□□□□□ -0.33
CTSA-207ENST00000484855 BPIFA4PQ86YQ2 179 aa13□□□□□ -0.33
CTSA-207ENST00000484855 FAM223AQ8IWN6 122 aa13□□□□□ -0.33
CTSA-207ENST00000484855 ANAPC16Q96DE5 110 aa13□□□□□ -0.33
CTSA-207ENST00000484855 H7BYZ3 331 aa13□□□□□ -0.33
CTSA-207ENST00000484855 AP4M1O00189 453 aa13□□□□□ -0.33
CTSA-207ENST00000484855 HNF1AP20823 631 aa13□□□□□ -0.33
CTSA-207ENST00000484855 MYCNOSP40205 109 aa13□□□□□ -0.33
CTSA-207ENST00000484855 Q6ZS46 218 aa13□□□□□ -0.33
CTSA-207ENST00000484855 TCEAL7Q9BRU2 100 aa13□□□□□ -0.33
CTSA-207ENST00000484855 GNB4Q9HAV0 340 aa13□□□□□ -0.33
CTSA-207ENST00000484855 ZNF98A6NK75 572 aa12.99□□□□□ -0.33
CTSA-207ENST00000484855 H3BTX0 84 aa12.99□□□□□ -0.33
CTSA-207ENST00000484855 PEX7O00628 323 aa12.99□□□□□ -0.33
CTSA-207ENST00000484855 HIST1H1EP10412 219 aaKnown RBP12.99□□□□□ -0.33
CTSA-207ENST00000484855 RAB5AP20339 215 aa12.99□□□□□ -0.33
CTSA-207ENST00000484855 GNG4P50150 75 aa12.99□□□□□ -0.33
CTSA-207ENST00000484855 CENPWQ5EE01 88 aa12.99□□□□□ -0.33
CTSA-207ENST00000484855 OCC1Q8TAD7 63 aa12.99□□□□□ -0.33
CTSA-207ENST00000484855 LY96Q9Y6Y9 160 aa12.99□□□□□ -0.33
CTSA-207ENST00000484855 IGHV3-35A0A0C4DH35 117 aa12.98□□□□□ -0.33
CTSA-207ENST00000484855 PGPA6NDG6 321 aa12.98□□□□□ -0.33
CTSA-207ENST00000484855 H3BUA1 57 aa12.98□□□□□ -0.33
CTSA-207ENST00000484855 FOLR2P14207 255 aa12.98□□□□□ -0.33
CTSA-207ENST00000484855 PPIFP30405 207 aaKnown RBP12.98□□□□□ -0.33
CTSA-207ENST00000484855 CIARTQ8N365 385 aaPredicted RBP12.98□□□□□ -0.33
CTSA-207ENST00000484855 OR4F17Q8NGA8 305 aa12.98□□□□□ -0.33
CTSA-207ENST00000484855 ZNF586Q9NXT0 402 aa12.98□□□□□ -0.33
CTSA-207ENST00000484855 RABAC1Q9UI14 185 aa12.98□□□□□ -0.33
CTSA-207ENST00000484855 ITPR3Q14573 2671 aa12.98□□□□□ -0.33
CTSA-207ENST00000484855 TEX15Q9BXT5 2789 aa12.98□□□□□ -0.33
CTSA-207ENST00000484855 BMPR1BO00238 502 aa12.98□□□□□ -0.33
CTSA-207ENST00000484855 SMAD7O15105 426 aaKnown RBP12.98□□□□□ -0.33
CTSA-207ENST00000484855 TGOLN2O43493 480 aa12.98□□□□□ -0.33
CTSA-207ENST00000484855 SLC25A5P05141 298 aaKnown RBP12.98□□□□□ -0.33
CTSA-207ENST00000484855 TPPP2P59282 170 aa12.98□□□□□ -0.33
CTSA-207ENST00000484855 Q6YL49 198 aa12.98□□□□□ -0.33
CTSA-207ENST00000484855 Q9H3A6 140 aa12.98□□□□□ -0.33
CTSA-207ENST00000484855 MLXQ9UH92 298 aa12.98□□□□□ -0.33
CTSA-207ENST00000484855 CD99P14209 185 aa12.97□□□□□ -0.33
CTSA-207ENST00000484855 CNN1P51911 297 aaKnown RBP12.97□□□□□ -0.33
CTSA-207ENST00000484855 GNG5P63218 68 aa12.97□□□□□ -0.33
CTSA-207ENST00000484855 TGIF2-C20orf24A0A0A6YYL0 155 aa12.97□□□□□ -0.33
CTSA-207ENST00000484855 CXCL1P09341 107 aa12.97□□□□□ -0.33
CTSA-207ENST00000484855 SFRP2Q96HF1 295 aa12.97□□□□□ -0.33
CTSA-207ENST00000484855 OR5B12Q96R08 314 aa12.97□□□□□ -0.33
CTSA-207ENST00000484855 VPREB3Q9UKI3 123 aa12.97□□□□□ -0.33
CTSA-207ENST00000484855 RNF24Q9Y225 148 aa12.97□□□□□ -0.33
CTSA-207ENST00000484855 PDZD2O15018 2839 aa12.96□□□□□ -0.33
CTSA-207ENST00000484855 K7EN84 100 aa12.96□□□□□ -0.33
CTSA-207ENST00000484855 BRI3O95415 125 aa12.96□□□□□ -0.33
CTSA-207ENST00000484855 IGLC2P0DOY2 106 aa12.96□□□□□ -0.33
CTSA-207ENST00000484855 TOMM20LQ6UXN7 152 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms