RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 LY6DQ14210 128 aa12.48□□□□□ -0.41
RXRA-203ENST00000484822 DUX3Q96PT4 197 aa12.48□□□□□ -0.41
RXRA-203ENST00000484822 TANC1Q9C0D5 1861 aa12.48□□□□□ -0.41
RXRA-203ENST00000484822 CREBBPQ92793 2442 aa12.48□□□□□ -0.41
RXRA-203ENST00000484822 RBMY1BA6NDE4 496 aaKnown RBP12.48□□□□□ -0.41
RXRA-203ENST00000484822 RBMY1EA6NEQ0 496 aaKnown RBP12.48□□□□□ -0.41
RXRA-203ENST00000484822 CD5LO43866 347 aa12.48□□□□□ -0.41
RXRA-203ENST00000484822 RBMY1DP0C7P1 496 aaKnown RBP12.48□□□□□ -0.41
RXRA-203ENST00000484822 RBMY1A1P0DJD3 496 aaKnown RBP12.48□□□□□ -0.41
RXRA-203ENST00000484822 RBMY1CP0DJD4 496 aa12.48□□□□□ -0.41
RXRA-203ENST00000484822 FAM166AQ6J272 317 aa12.48□□□□□ -0.41
RXRA-203ENST00000484822 CST9LQ9H4G1 147 aa12.48□□□□□ -0.41
RXRA-203ENST00000484822 SPINK8P0C7L1 97 aa12.48□□□□□ -0.41
RXRA-203ENST00000484822 FGFBP3Q8TAT2 258 aa12.48□□□□□ -0.41
RXRA-203ENST00000484822 DEFB104AQ8WTQ1 72 aa12.48□□□□□ -0.41
RXRA-203ENST00000484822 COL4A6Q14031 1691 aa12.47□□□□□ -0.41
RXRA-203ENST00000484822 C10orf55Q5SWW7 151 aa12.47□□□□□ -0.41
RXRA-203ENST00000484822 MGST2Q99735 147 aa12.47□□□□□ -0.41
RXRA-203ENST00000484822 IGHV3-11P01762 117 aa12.47□□□□□ -0.41
RXRA-203ENST00000484822 CD24P25063 80 aa12.47□□□□□ -0.41
RXRA-203ENST00000484822 PSG3Q16557 428 aa12.47□□□□□ -0.41
RXRA-203ENST00000484822 TMEM14EPQ6UXP3 125 aa12.47□□□□□ -0.41
RXRA-203ENST00000484822 EXOC3-AS1Q8N2X6 119 aa12.47□□□□□ -0.41
RXRA-203ENST00000484822 C11orf68Q9H3H3 251 aaKnown RBP12.47□□□□□ -0.41
RXRA-203ENST00000484822 IGKV1-27A0A075B6S5 117 aa12.47□□□□□ -0.41
RXRA-203ENST00000484822 TRAV21A0A0B4J279 112 aa12.47□□□□□ -0.41
RXRA-203ENST00000484822 IGHV1-2P23083 117 aa12.47□□□□□ -0.41
RXRA-203ENST00000484822 ADAMTSL5Q6ZMM2 481 aa12.47□□□□□ -0.41
RXRA-203ENST00000484822 SMPXQ9UHP9 88 aa12.47□□□□□ -0.41
RXRA-203ENST00000484822 IL18BPO95998 194 aa12.47□□□□□ -0.41
RXRA-203ENST00000484822 BSPH1Q075Z2 132 aa12.47□□□□□ -0.41
RXRA-203ENST00000484822 ATXN8Q156A1 80 aa12.46□□□□□ -0.41
RXRA-203ENST00000484822 PVRIGQ6DKI7 326 aa12.46□□□□□ -0.41
RXRA-203ENST00000484822 GPR179Q6PRD1 2367 aa12.46□□□□□ -0.41
RXRA-203ENST00000484822 NPC2P61916 151 aa12.46□□□□□ -0.41
RXRA-203ENST00000484822 FOXF2Q12947 444 aa12.46□□□□□ -0.41
RXRA-203ENST00000484822 SPSB3Q6PJ21 355 aa12.46□□□□□ -0.41
RXRA-203ENST00000484822 SCRT1Q9BWW7 348 aa12.46□□□□□ -0.41
RXRA-203ENST00000484822 PRSS22Q9GZN4 317 aa12.46□□□□□ -0.41
RXRA-203ENST00000484822 SRCAPQ6ZRS2 3230 aa12.46□□□□□ -0.41
RXRA-203ENST00000484822 DPH3Q96FX2 82 aa12.46□□□□□ -0.41
RXRA-203ENST00000484822 C20orf144Q9BQM9 153 aa12.46□□□□□ -0.41
RXRA-203ENST00000484822 ACACAQ13085 2346 aa12.46□□□□□ -0.42
RXRA-203ENST00000484822 ZC2HC1BQ5TFG8 222 aa12.45□□□□□ -0.42
RXRA-203ENST00000484822 DLX4Q92988 240 aaPredicted RBP12.45□□□□□ -0.42
RXRA-203ENST00000484822 MRPL27Q9P0M9 148 aaKnown RBP12.45□□□□□ -0.42
RXRA-203ENST00000484822 DOCK9Q9BZ29 2069 aa12.45□□□□□ -0.42
RXRA-203ENST00000484822 PMS2P5A8MQ11 134 aa12.45□□□□□ -0.42
RXRA-203ENST00000484822 M0R2P5 195 aa12.45□□□□□ -0.42
RXRA-203ENST00000484822 KLF17Q5JT82 389 aaPredicted RBP12.45□□□□□ -0.42
RXRA-203ENST00000484822 KIAA2026Q5HYC2 2103 aa12.45□□□□□ -0.42
RXRA-203ENST00000484822 LYZL1Q6UWQ5 148 aa12.45□□□□□ -0.42
RXRA-203ENST00000484822 C9orf106Q8NAJ2 232 aa12.45□□□□□ -0.42
RXRA-203ENST00000484822 MESP1Q9BRJ9 268 aa12.45□□□□□ -0.42
RXRA-203ENST00000484822 LAGE3Q14657 143 aa12.45□□□□□ -0.42
RXRA-203ENST00000484822 RASL11AQ6T310 242 aa12.45□□□□□ -0.42
RXRA-203ENST00000484822 FAM90A1Q86YD7 464 aa12.45□□□□□ -0.42
RXRA-203ENST00000484822 SLX1AQ9BQ83 275 aa12.45□□□□□ -0.42
RXRA-203ENST00000484822 C5orf63A6NC05 138 aa12.45□□□□□ -0.42
RXRA-203ENST00000484822 PAX1P15863 534 aa12.45□□□□□ -0.42
RXRA-203ENST00000484822 ITLN2Q8WWU7 325 aaPredicted RBP12.45□□□□□ -0.42
RXRA-203ENST00000484822 TSC2P49815 1807 aa12.44□□□□□ -0.42
RXRA-203ENST00000484822 TCRAP04437 139 aa12.44□□□□□ -0.42
RXRA-203ENST00000484822 CD28P10747 220 aa12.44□□□□□ -0.42
RXRA-203ENST00000484822 LCNL1Q6ZST4 164 aa12.44□□□□□ -0.42
RXRA-203ENST00000484822 RPRMLQ8N4K4 120 aa12.44□□□□□ -0.42
RXRA-203ENST00000484822 SLC50A1Q9BRV3 221 aa12.44□□□□□ -0.42
RXRA-203ENST00000484822 TCF20Q9UGU0 1960 aaKnown RBP12.44□□□□□ -0.42
RXRA-203ENST00000484822 LRRK1Q38SD2 2015 aa12.44□□□□□ -0.42
RXRA-203ENST00000484822 CRYGSP22914 178 aa12.44□□□□□ -0.42
RXRA-203ENST00000484822 C8orf46Q8TAG6 207 aa12.44□□□□□ -0.42
RXRA-203ENST00000484822 IGKV2-40A0A087WW87 121 aaPredicted RBP12.44□□□□□ -0.42
RXRA-203ENST00000484822 IGKV2D-40P01614 121 aaPredicted RBP12.44□□□□□ -0.42
RXRA-203ENST00000484822 ZNF581Q9P0T4 197 aa12.44□□□□□ -0.42
RXRA-203ENST00000484822 TRAV3A0A0B4J244 114 aa12.44□□□□□ -0.42
RXRA-203ENST00000484822 GGTLC3B5MD39 225 aa12.44□□□□□ -0.42
RXRA-203ENST00000484822 LYL1P12980 280 aa12.44□□□□□ -0.42
RXRA-203ENST00000484822 F2Z2F3 143 aa12.43□□□□□ -0.42
RXRA-203ENST00000484822 NBR2O15453 112 aa12.43□□□□□ -0.42
RXRA-203ENST00000484822 SSBP2P81877 361 aaPredicted RBP12.43□□□□□ -0.42
RXRA-203ENST00000484822 ZCCHC24Q8N2G6 241 aaKnown RBP12.43□□□□□ -0.42
RXRA-203ENST00000484822 STPG4Q8N801 248 aa12.43□□□□□ -0.42
RXRA-203ENST00000484822 FAM231BA6NCW3 169 aa12.43□□□□□ -0.42
RXRA-203ENST00000484822 TDGF1P13385 188 aa12.43□□□□□ -0.42
RXRA-203ENST00000484822 A0A0G2JRQ6 117 aa12.43□□□□□ -0.42
RXRA-203ENST00000484822 VDAC2P45880 294 aaPredicted RBP12.43□□□□□ -0.42
RXRA-203ENST00000484822 LINC01587Q99440 93 aa12.43□□□□□ -0.42
RXRA-203ENST00000484822 KLHDC3Q9BQ90 382 aa12.43□□□□□ -0.42
RXRA-203ENST00000484822 FAM90A9PA6NNJ1 464 aa12.43□□□□□ -0.42
RXRA-203ENST00000484822 NTF4P34130 210 aa12.43□□□□□ -0.42
RXRA-203ENST00000484822 ZIC4Q8N9L1 334 aa12.43□□□□□ -0.42
RXRA-203ENST00000484822 SSC4DQ8WTU2 575 aa12.43□□□□□ -0.42
RXRA-203ENST00000484822 TNFRSF6BO95407 300 aa12.42□□□□□ -0.42
RXRA-203ENST00000484822 THBDP07204 575 aa12.42□□□□□ -0.42
RXRA-203ENST00000484822 PFN1P07737 140 aaKnown RBP12.42□□□□□ -0.42
RXRA-203ENST00000484822 HIST1H4AP62805 103 aaKnown RBP12.42□□□□□ -0.42
RXRA-203ENST00000484822 SPTAN1Q13813 2472 aaKnown RBP12.42□□□□□ -0.42
RXRA-203ENST00000484822 C2orf82Q6UX34 121 aa12.42□□□□□ -0.42
RXRA-203ENST00000484822 DOCK11Q5JSL3 2073 aa12.42□□□□□ -0.42
RXRA-203ENST00000484822 EFNA2O43921 213 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 223.2 ms