RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 C6orf62Q9GZU0 229 aaPredicted RBP0.34□□□□□ -2.36
SCAF11-207ENST00000484275 NMNAT1Q9HAN9 279 aaPredicted RBP0.34□□□□□ -2.36
SCAF11-207ENST00000484275 ACER3Q9NUN7 267 aa0.34□□□□□ -2.36
SCAF11-207ENST00000484275 UBAP1Q9NZ09 502 aa0.34□□□□□ -2.36
SCAF11-207ENST00000484275 ZFP30Q9Y2G7 519 aa0.34□□□□□ -2.36
SCAF11-207ENST00000484275 COL1A1P02452 1464 aaPredicted RBP0.34□□□□□ -2.36
SCAF11-207ENST00000484275 KIAA1549LQ6ZVL6 1849 aa0.34□□□□□ -2.36
SCAF11-207ENST00000484275 NISCHQ9Y2I1 1504 aa0.33□□□□□ -2.36
SCAF11-207ENST00000484275 MIA2Q96PC5 1412 aa0.33□□□□□ -2.36
SCAF11-207ENST00000484275 CCDC160A6NGH7 325 aa0.33□□□□□ -2.36
SCAF11-207ENST00000484275 FAM159BA6NKW6 160 aa0.33□□□□□ -2.36
SCAF11-207ENST00000484275 TIMM17BO60830 172 aa0.33□□□□□ -2.36
SCAF11-207ENST00000484275 GADD45GO95257 159 aa0.33□□□□□ -2.36
SCAF11-207ENST00000484275 DHFRP00374 187 aa0.33□□□□□ -2.36
SCAF11-207ENST00000484275 IFNA7P01567 189 aa0.33□□□□□ -2.36
SCAF11-207ENST00000484275 CST2P09228 141 aa0.33□□□□□ -2.36
SCAF11-207ENST00000484275 CTXN2P0C2S0 81 aa0.33□□□□□ -2.36
SCAF11-207ENST00000484275 PIGPP57054 158 aa0.33□□□□□ -2.36
SCAF11-207ENST00000484275 DYNLT1P63172 113 aa0.33□□□□□ -2.36
SCAF11-207ENST00000484275 EIF5AP63241 154 aaKnown RBP0.33□□□□□ -2.36
SCAF11-207ENST00000484275 MYL5Q02045 173 aa0.33□□□□□ -2.36
SCAF11-207ENST00000484275 KRR1Q13601 381 aaKnown RBP0.33□□□□□ -2.36
SCAF11-207ENST00000484275 RRN3P1Q2M238 152 aa0.33□□□□□ -2.36
SCAF11-207ENST00000484275 FAM74A1Q5RGS3 127 aa0.33□□□□□ -2.36
SCAF11-207ENST00000484275 BCL2L15Q5TBC7 163 aa0.33□□□□□ -2.36
SCAF11-207ENST00000484275 C22orf39Q6P5X5 142 aa0.33□□□□□ -2.36
SCAF11-207ENST00000484275 TEX261Q6UWH6 196 aa0.33□□□□□ -2.36
SCAF11-207ENST00000484275 C2orf82Q6UX34 121 aa0.33□□□□□ -2.36
SCAF11-207ENST00000484275 OR11H6Q8NGC7 330 aa0.33□□□□□ -2.36
SCAF11-207ENST00000484275 BORCS5Q969J3 196 aa0.33□□□□□ -2.36
SCAF11-207ENST00000484275 AMELYQ99218 206 aa0.33□□□□□ -2.36
SCAF11-207ENST00000484275 GPER1Q99527 375 aa0.33□□□□□ -2.36
SCAF11-207ENST00000484275 IMUPQ9GZP8 106 aa0.33□□□□□ -2.36
SCAF11-207ENST00000484275 RNASE7Q9H1E1 156 aaKnown RBP0.33□□□□□ -2.36
SCAF11-207ENST00000484275 CDC42SE1Q9NRR8 79 aa0.33□□□□□ -2.36
SCAF11-207ENST00000484275 UQCC1Q9NVA1 299 aa0.33□□□□□ -2.36
SCAF11-207ENST00000484275 ARL2BPQ9Y2Y0 163 aa0.33□□□□□ -2.36
SCAF11-207ENST00000484275 UTP11Q9Y3A2 253 aaKnown RBP0.33□□□□□ -2.36
SCAF11-207ENST00000484275 U3KQ87 197 aa0.33□□□□□ -2.36
SCAF11-207ENST00000484275 CAMSAP2Q08AD1 1489 aa0.33□□□□□ -2.36
SCAF11-207ENST00000484275 CECR2Q9BXF3 1484 aa0.33□□□□□ -2.36
SCAF11-207ENST00000484275 UHRF1BP1Q6BDS2 1440 aa0.32□□□□□ -2.36
SCAF11-207ENST00000484275 ADGRL3Q9HAR2 1447 aa0.32□□□□□ -2.36
SCAF11-207ENST00000484275 CITO14578 2027 aa0.32□□□□□ -2.36
SCAF11-207ENST00000484275 TRBV6-4A0A1B0GX49 114 aa0.32□□□□□ -2.36
SCAF11-207ENST00000484275 TMEM210A6NLX4 147 aa0.32□□□□□ -2.36
SCAF11-207ENST00000484275 A8MWV9 139 aa0.32□□□□□ -2.36
SCAF11-207ENST00000484275 NDUFB3O43676 98 aa0.32□□□□□ -2.36
SCAF11-207ENST00000484275 SERPINA1P01009 418 aa0.32□□□□□ -2.36
SCAF11-207ENST00000484275 IFNA6P05013 189 aa0.32□□□□□ -2.36
SCAF11-207ENST00000484275 CYBAP13498 195 aa0.32□□□□□ -2.36
SCAF11-207ENST00000484275 SRIP30626 198 aa0.32□□□□□ -2.36
SCAF11-207ENST00000484275 ATP5G3P48201 142 aa0.32□□□□□ -2.36
SCAF11-207ENST00000484275 SERPINB9P50453 376 aa0.32□□□□□ -2.36
SCAF11-207ENST00000484275 CNBPP62633 177 aaKnown RBP0.32□□□□□ -2.36
SCAF11-207ENST00000484275 UBE2BP63146 152 aa0.32□□□□□ -2.36
SCAF11-207ENST00000484275 REEP5Q00765 189 aa0.32□□□□□ -2.36
SCAF11-207ENST00000484275 PSG9Q00887 426 aa0.32□□□□□ -2.36
SCAF11-207ENST00000484275 TMED2Q15363 201 aa0.32□□□□□ -2.36
SCAF11-207ENST00000484275 LINC00322Q6ZN03 302 aaPredicted RBP0.32□□□□□ -2.36
SCAF11-207ENST00000484275 GOLT1AQ6ZVE7 132 aa0.32□□□□□ -2.36
SCAF11-207ENST00000484275 CLECL1Q8IZS7 167 aa0.32□□□□□ -2.36
SCAF11-207ENST00000484275 ST6GALNAC3Q8NDV1 305 aa0.32□□□□□ -2.36
SCAF11-207ENST00000484275 PLPP5Q8NEB5 264 aa0.32□□□□□ -2.36
SCAF11-207ENST00000484275 OR10X1Q8NGY0 326 aa0.32□□□□□ -2.36
SCAF11-207ENST00000484275 CANT1Q8WVQ1 401 aa0.32□□□□□ -2.36
SCAF11-207ENST00000484275 TP53RKQ96S44 253 aa0.32□□□□□ -2.36
SCAF11-207ENST00000484275 TMEM126AQ9H061 195 aa0.32□□□□□ -2.36
SCAF11-207ENST00000484275 FAM32AQ9Y421 112 aaKnown RBP0.32□□□□□ -2.36
SCAF11-207ENST00000484275 MGAMO43451 1857 aa0.32□□□□□ -2.36
SCAF11-207ENST00000484275 NUP210Q8TEM1 1887 aaPredicted RBP0.32□□□□□ -2.36
SCAF11-207ENST00000484275 SNRNP200O75643 2136 aaKnown RBP0.32□□□□□ -2.36
SCAF11-207ENST00000484275 ATG2AQ2TAZ0 1938 aa0.32□□□□□ -2.36
SCAF11-207ENST00000484275 FSIP2Q5CZC0 6907 aa0.32□□□□□ -2.36
SCAF11-207ENST00000484275 USP24Q9UPU5 2620 aa0.32□□□□□ -2.36
SCAF11-207ENST00000484275 MACF1Q9UPN3 7388 aaKnown RBP0.31□□□□□ -2.36
SCAF11-207ENST00000484275 USP54Q70EL1 1684 aa0.31□□□□□ -2.36
SCAF11-207ENST00000484275 IGLV3-32A0A0A0MS00 114 aa0.31□□□□□ -2.36
SCAF11-207ENST00000484275 A0A1W2PPM0 123 aa0.31□□□□□ -2.36
SCAF11-207ENST00000484275 TCRBV4S1A1TA0A5B7 111 aa0.31□□□□□ -2.36
SCAF11-207ENST00000484275 NCR3O14931 201 aa0.31□□□□□ -2.36
SCAF11-207ENST00000484275 HMGB3O15347 200 aaKnown RBP0.31□□□□□ -2.36
SCAF11-207ENST00000484275 CCL16O15467 120 aa0.31□□□□□ -2.36
SCAF11-207ENST00000484275 ZNF25P17030 456 aaPredicted RBP0.31□□□□□ -2.36
SCAF11-207ENST00000484275 DSCR4P56555 118 aaPredicted RBP0.31□□□□□ -2.36
SCAF11-207ENST00000484275 DEFA3P59666 94 aa0.31□□□□□ -2.36
SCAF11-207ENST00000484275 HSPE1P61604 102 aaKnown RBP0.31□□□□□ -2.36
SCAF11-207ENST00000484275 C4orf22Q6V702 233 aa0.31□□□□□ -2.36
SCAF11-207ENST00000484275 ZNF833PQ6ZTB9 187 aa0.31□□□□□ -2.36
SCAF11-207ENST00000484275 PDZD9Q8IXQ8 264 aa0.31□□□□□ -2.36
SCAF11-207ENST00000484275 Q8IYB0 196 aa0.31□□□□□ -2.36
SCAF11-207ENST00000484275 CHMP6Q96FZ7 201 aa0.31□□□□□ -2.36
SCAF11-207ENST00000484275 LINC00052Q96N35 136 aa0.31□□□□□ -2.36
SCAF11-207ENST00000484275 SLC25A21Q9BQT8 299 aaPredicted RBP0.31□□□□□ -2.36
SCAF11-207ENST00000484275 TMEM70Q9BUB7 260 aa0.31□□□□□ -2.36
SCAF11-207ENST00000484275 ENY2Q9NPA8 101 aa0.31□□□□□ -2.36
SCAF11-207ENST00000484275 ARMC1Q9NVT9 282 aa0.31□□□□□ -2.36
SCAF11-207ENST00000484275 ORMDL1Q9P0S3 153 aa0.31□□□□□ -2.36
SCAF11-207ENST00000484275 TMEM14CQ9P0S9 112 aa0.31□□□□□ -2.36
SCAF11-207ENST00000484275 OPTCQ9UBM4 332 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms