RNA–Protein interactions for RNA: ENST00000484077.1

RIF1-210, Transcript of replication timing regulatory factor 1, human

TSL 3

Gene RIF1, Length 782 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RIF1-210	ENST00000484077	PVRIG	Q6DKI7	326 aa		4.58	□□□□□ -1.68
RIF1-210	ENST00000484077	LYG2	Q86SG7	212 aa		4.58	□□□□□ -1.68
RIF1-210	ENST00000484077	NFE4	Q86UQ8	179 aa		4.58	□□□□□ -1.68
RIF1-210	ENST00000484077	DUSP18	Q8NEJ0	188 aa		4.58	□□□□□ -1.68
RIF1-210	ENST00000484077	COQ8A	Q8NI60	647 aa		4.58	□□□□□ -1.68
RIF1-210	ENST00000484077	MARC2	Q969Z3	335 aa		4.58	□□□□□ -1.68
RIF1-210	ENST00000484077	TXN2	Q99757	166 aa		4.58	□□□□□ -1.68
RIF1-210	ENST00000484077	C20orf24	Q9BUV8	137 aa		4.58	□□□□□ -1.68
RIF1-210	ENST00000484077	RBKS	Q9H477	322 aa		4.58	□□□□□ -1.68
RIF1-210	ENST00000484077	TECR	Q9NZ01	308 aa	Known RBP	4.58	□□□□□ -1.68
RIF1-210	ENST00000484077	MLX	Q9UH92	298 aa		4.58	□□□□□ -1.68
RIF1-210	ENST00000484077	FLVCR2	Q9UPI3	526 aa		4.58	□□□□□ -1.68
RIF1-210	ENST00000484077	TMED3	Q9Y3Q3	217 aa		4.58	□□□□□ -1.68
RIF1-210	ENST00000484077	COL7A1	Q02388	2944 aa		4.58	□□□□□ -1.68
RIF1-210	ENST00000484077	C15orf62	A8K5M9	175 aa		4.57	□□□□□ -1.68
RIF1-210	ENST00000484077	USP17L23	D6RBM5	183 aa		4.57	□□□□□ -1.68
RIF1-210	ENST00000484077	FAM90A26	D6RGX4	464 aa		4.57	□□□□□ -1.68
RIF1-210	ENST00000484077	PLA2G10	O15496	165 aa		4.57	□□□□□ -1.68
RIF1-210	ENST00000484077	ZNF207	O43670	478 aa	Known RBP	4.57	□□□□□ -1.68
RIF1-210	ENST00000484077	IFNA10	P01566	189 aa		4.57	□□□□□ -1.68
RIF1-210	ENST00000484077	CTSG	P08311	255 aa		4.57	□□□□□ -1.68
RIF1-210	ENST00000484077	FRMD6-AS1	P0C7T7	363 aa		4.57	□□□□□ -1.68
RIF1-210	ENST00000484077	IAPP	P10997	89 aa		4.57	□□□□□ -1.68
RIF1-210	ENST00000484077	SLC25A6	P12236	298 aa		4.57	□□□□□ -1.68
RIF1-210	ENST00000484077	CBLN1	P23435	193 aa		4.57	□□□□□ -1.68
RIF1-210	ENST00000484077	CD81	P60033	236 aa		4.57	□□□□□ -1.68
RIF1-210	ENST00000484077	ZNF846	Q147U1	533 aa		4.57	□□□□□ -1.68
RIF1-210	ENST00000484077	GUCA2B	Q16661	112 aa		4.57	□□□□□ -1.68
RIF1-210	ENST00000484077	DEFB114	Q30KQ6	69 aa		4.57	□□□□□ -1.68
RIF1-210	ENST00000484077	ZNF600	Q6ZNG1	722 aa		4.57	□□□□□ -1.68
RIF1-210	ENST00000484077	SLC16A13	Q7RTY0	426 aa		4.57	□□□□□ -1.68
RIF1-210	ENST00000484077	TMEM61	Q8N0U2	210 aa		4.57	□□□□□ -1.68
RIF1-210	ENST00000484077	UXS1	Q8NBZ7	420 aa		4.57	□□□□□ -1.68
RIF1-210	ENST00000484077	RNASEH2C	Q8TDP1	164 aa	Known RBP	4.57	□□□□□ -1.68
RIF1-210	ENST00000484077	ZNF414	Q96IQ9	312 aa		4.57	□□□□□ -1.68
RIF1-210	ENST00000484077	GINS3	Q9BRX5	216 aa		4.57	□□□□□ -1.68
RIF1-210	ENST00000484077	FNDC4	Q9H6D8	234 aa	Predicted RBP	4.57	□□□□□ -1.68
RIF1-210	ENST00000484077	BATF3	Q9NR55	127 aa		4.57	□□□□□ -1.68
RIF1-210	ENST00000484077	NUDT15	Q9NV35	164 aa		4.57	□□□□□ -1.68
RIF1-210	ENST00000484077	MRPL27	Q9P0M9	148 aa	Known RBP	4.57	□□□□□ -1.68
RIF1-210	ENST00000484077	SELENOK	Q9Y6D0	94 aa		4.57	□□□□□ -1.68
RIF1-210	ENST00000484077	DNAH7	Q8WXX0	4024 aa		4.57	□□□□□ -1.68
RIF1-210	ENST00000484077	SORL1	Q92673	2214 aa		4.57	□□□□□ -1.68
RIF1-210	ENST00000484077	HUWE1	Q7Z6Z7	4374 aa	Known RBP	4.57	□□□□□ -1.68
RIF1-210	ENST00000484077	TRAV6	A0A075B6T7	132 aa		4.56	□□□□□ -1.68
RIF1-210	ENST00000484077	PITX3	O75364	302 aa		4.56	□□□□□ -1.68
RIF1-210	ENST00000484077	CLN5	O75503	358 aa		4.56	□□□□□ -1.68
RIF1-210	ENST00000484077	MED6	O75586	246 aa		4.56	□□□□□ -1.68
RIF1-210	ENST00000484077	ADAP1	O75689	374 aa		4.56	□□□□□ -1.68
RIF1-210	ENST00000484077	UPK1B	O75841	260 aa		4.56	□□□□□ -1.68
RIF1-210	ENST00000484077	YIF1A	O95070	293 aa		4.56	□□□□□ -1.68
RIF1-210	ENST00000484077	C8orf88	P0DMB2	117 aa		4.56	□□□□□ -1.68
RIF1-210	ENST00000484077	SLC25A4	P12235	298 aa		4.56	□□□□□ -1.68
RIF1-210	ENST00000484077	RND2	P52198	227 aa		4.56	□□□□□ -1.68
RIF1-210	ENST00000484077	ASAH1	Q13510	395 aa		4.56	□□□□□ -1.68
RIF1-210	ENST00000484077	ETFRF1	Q6IPR1	90 aa		4.56	□□□□□ -1.68
RIF1-210	ENST00000484077	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.56	□□□□□ -1.68
RIF1-210	ENST00000484077	RBPMS2	Q6ZRY4	209 aa	Known RBP	4.56	□□□□□ -1.68
RIF1-210	ENST00000484077	OR52B4	Q8NGK2	314 aa		4.56	□□□□□ -1.68
RIF1-210	ENST00000484077	OR4X1	Q8NH49	305 aa		4.56	□□□□□ -1.68
RIF1-210	ENST00000484077	ENKUR	Q8TC29	256 aa		4.56	□□□□□ -1.68
RIF1-210	ENST00000484077	OR10C1	Q96KK4	312 aa		4.56	□□□□□ -1.68
RIF1-210	ENST00000484077	ASCL2	Q99929	193 aa		4.56	□□□□□ -1.68
RIF1-210	ENST00000484077	NEURL2	Q9BR09	285 aa		4.56	□□□□□ -1.68
RIF1-210	ENST00000484077	WFDC10A	Q9H1F0	79 aa		4.56	□□□□□ -1.68
RIF1-210	ENST00000484077	MRPL36	Q9P0J6	103 aa	Known RBP	4.56	□□□□□ -1.68
RIF1-210	ENST00000484077	TBC1D24	Q9ULP9	559 aa		4.56	□□□□□ -1.68
RIF1-210	ENST00000484077	PUS1	Q9Y606	427 aa	Known RBP eCLIP	4.56	□□□□□ -1.68
RIF1-210	ENST00000484077		U3KQ87	197 aa		4.56	□□□□□ -1.68
RIF1-210	ENST00000484077	IGHV3-49	A0A0A0MS15	119 aa		4.55	□□□□□ -1.68
RIF1-210	ENST00000484077	TRAV25	A0A0B4J276	109 aa		4.55	□□□□□ -1.68
RIF1-210	ENST00000484077	IGHV7-4-1	A0A0J9YVY3	117 aa		4.55	□□□□□ -1.68
RIF1-210	ENST00000484077	FAM240B	A0A1B0GVZ2	78 aa		4.55	□□□□□ -1.68
RIF1-210	ENST00000484077	MPTX1	A8MV57	137 aa		4.55	□□□□□ -1.68
RIF1-210	ENST00000484077		H3BP45	60 aa		4.55	□□□□□ -1.68
RIF1-210	ENST00000484077		K7EMT4	169 aa		4.55	□□□□□ -1.68
RIF1-210	ENST00000484077	WRB	O00258	174 aa		4.55	□□□□□ -1.68
RIF1-210	ENST00000484077	CCS	O14618	274 aa		4.55	□□□□□ -1.68
RIF1-210	ENST00000484077	SYNGR2	O43760	224 aa		4.55	□□□□□ -1.68
RIF1-210	ENST00000484077	SSSCA1	O60232	199 aa		4.55	□□□□□ -1.68
RIF1-210	ENST00000484077	IFNA21	P01568	189 aa		4.55	□□□□□ -1.68
RIF1-210	ENST00000484077	TCRB	P04435	133 aa		4.55	□□□□□ -1.68
RIF1-210	ENST00000484077	IFNA4	P05014	189 aa		4.55	□□□□□ -1.68
RIF1-210	ENST00000484077	CD7	P09564	240 aa		4.55	□□□□□ -1.68
RIF1-210	ENST00000484077	IGLC1	P0CG04	106 aa		4.55	□□□□□ -1.68
RIF1-210	ENST00000484077	OR10J1	P30954	320 aa		4.55	□□□□□ -1.68
RIF1-210	ENST00000484077	BMI1	P35226	326 aa		4.55	□□□□□ -1.68
RIF1-210	ENST00000484077	RAB11A	P62491	216 aa		4.55	□□□□□ -1.68
RIF1-210	ENST00000484077	GAGE5	Q13069	117 aa		4.55	□□□□□ -1.68
RIF1-210	ENST00000484077	GAGE6	Q13070	117 aa		4.55	□□□□□ -1.68
RIF1-210	ENST00000484077	TIGIT	Q495A1	244 aa		4.55	□□□□□ -1.68
RIF1-210	ENST00000484077	LAMTOR1	Q6IAA8	161 aa		4.55	□□□□□ -1.68
RIF1-210	ENST00000484077	MZT2B	Q6NZ67	158 aa		4.55	□□□□□ -1.68
RIF1-210	ENST00000484077	PRSS54	Q6PEW0	395 aa		4.55	□□□□□ -1.68
RIF1-210	ENST00000484077	TOMM20L	Q6UXN7	152 aa		4.55	□□□□□ -1.68
RIF1-210	ENST00000484077	TMEM116	Q8NCL8	245 aa		4.55	□□□□□ -1.68
RIF1-210	ENST00000484077	OR4D5	Q8NGN0	318 aa		4.55	□□□□□ -1.68
RIF1-210	ENST00000484077	OR1S2	Q8NGQ3	325 aa		4.55	□□□□□ -1.68
RIF1-210	ENST00000484077	MITD1	Q8WV92	249 aa		4.55	□□□□□ -1.68
RIF1-210	ENST00000484077	ACY3	Q96HD9	319 aa		4.55	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 55 ms