RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 LINC00527Q9UJ94 153 aa10.92□□□□□ -0.66
CLK3-204ENST00000483723 CSPG4Q6UVK1 2322 aa10.92□□□□□ -0.66
CLK3-204ENST00000483723 OR2T8A6NH00 312 aa10.92□□□□□ -0.66
CLK3-204ENST00000483723 GP9P14770 177 aa10.92□□□□□ -0.66
CLK3-204ENST00000483723 MYCNOSP40205 109 aa10.92□□□□□ -0.66
CLK3-204ENST00000483723 CFHR3Q02985 330 aa10.92□□□□□ -0.66
CLK3-204ENST00000483723 EEF1AKMT3Q96AZ1 226 aa10.92□□□□□ -0.66
CLK3-204ENST00000483723 CCDC140Q96MF4 163 aa10.92□□□□□ -0.66
CLK3-204ENST00000483723 VPREB3Q9UKI3 123 aa10.92□□□□□ -0.66
CLK3-204ENST00000483723 CENPEQ02224 2701 aa10.91□□□□□ -0.66
CLK3-204ENST00000483723 PDZD2O15018 2839 aa10.91□□□□□ -0.66
CLK3-204ENST00000483723 SCO2A0A1W2PP80 73 aa10.91□□□□□ -0.66
CLK3-204ENST00000483723 GGTLC3B5MD39 225 aa10.91□□□□□ -0.66
CLK3-204ENST00000483723 IGLV1-40P01703 118 aa10.91□□□□□ -0.66
CLK3-204ENST00000483723 IL4P05112 153 aa10.91□□□□□ -0.66
CLK3-204ENST00000483723 AKR1C3P42330 323 aa10.91□□□□□ -0.66
CLK3-204ENST00000483723 RPL23P62829 140 aaKnown RBP10.91□□□□□ -0.66
CLK3-204ENST00000483723 ATP5G2Q06055 141 aa10.91□□□□□ -0.66
CLK3-204ENST00000483723 KRTAP1-1Q07627 177 aa10.91□□□□□ -0.66
CLK3-204ENST00000483723 USF2Q15853 346 aaPredicted RBP10.91□□□□□ -0.66
CLK3-204ENST00000483723 ZNF674Q2M3X9 581 aa10.91□□□□□ -0.66
CLK3-204ENST00000483723 ZNF600Q6ZNG1 722 aa10.91□□□□□ -0.66
CLK3-204ENST00000483723 MS4A10Q96PG2 267 aa10.91□□□□□ -0.66
CLK3-204ENST00000483723 CLEC3BP05452 202 aa10.9□□□□□ -0.66
CLK3-204ENST00000483723 NBEAP1P0C6P0 100 aa10.9□□□□□ -0.66
CLK3-204ENST00000483723 SUMO1P63165 101 aaKnown RBP10.9□□□□□ -0.66
CLK3-204ENST00000483723 S100A7AQ86SG5 101 aa10.9□□□□□ -0.66
CLK3-204ENST00000483723 NOL4LQ96MY1 436 aaPredicted RBP10.9□□□□□ -0.66
CLK3-204ENST00000483723 NOTCH2Q04721 2471 aa10.9□□□□□ -0.66
CLK3-204ENST00000483723 CSMD2Q7Z408 3487 aa10.9□□□□□ -0.66
CLK3-204ENST00000483723 TEX15Q9BXT5 2789 aa10.9□□□□□ -0.66
CLK3-204ENST00000483723 SMAD7O15105 426 aaKnown RBP10.89□□□□□ -0.67
CLK3-204ENST00000483723 MRPS12O15235 138 aaKnown RBP10.89□□□□□ -0.67
CLK3-204ENST00000483723 TRGV3P03979 118 aa10.89□□□□□ -0.67
CLK3-204ENST00000483723 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.89□□□□□ -0.67
CLK3-204ENST00000483723 USMG5Q96IX5 58 aa10.89□□□□□ -0.67
CLK3-204ENST00000483723 ELOVL1Q9BW60 279 aa10.89□□□□□ -0.67
CLK3-204ENST00000483723 TMEM242Q9NWH2 141 aa10.89□□□□□ -0.67
CLK3-204ENST00000483723 ZNF98A6NK75 572 aa10.89□□□□□ -0.67
CLK3-204ENST00000483723 COLCA2A8K830 154 aa10.89□□□□□ -0.67
CLK3-204ENST00000483723 TSPAN4O14817 238 aa10.89□□□□□ -0.67
CLK3-204ENST00000483723 TGOLN2O43493 480 aa10.89□□□□□ -0.67
CLK3-204ENST00000483723 HIST1H1EP10412 219 aaKnown RBP10.89□□□□□ -0.67
CLK3-204ENST00000483723 GPR183P32249 361 aa10.89□□□□□ -0.67
CLK3-204ENST00000483723 LEMD1Q68G75 181 aa10.89□□□□□ -0.67
CLK3-204ENST00000483723 CLEC19AQ6UXS0 136 aa10.89□□□□□ -0.67
CLK3-204ENST00000483723 C2CD4CQ8TF44 421 aa10.89□□□□□ -0.67
CLK3-204ENST00000483723 TCEAL7Q9BRU2 100 aa10.89□□□□□ -0.67
CLK3-204ENST00000483723 DERL1Q9BUN8 251 aa10.89□□□□□ -0.67
CLK3-204ENST00000483723 TRBV20OR9-2A0A075B6H5 130 aa10.88□□□□□ -0.67
CLK3-204ENST00000483723 C9JCJ5 164 aa10.88□□□□□ -0.67
CLK3-204ENST00000483723 CD5LO43866 347 aa10.88□□□□□ -0.67
CLK3-204ENST00000483723 CRYBB3P26998 211 aa10.88□□□□□ -0.67
CLK3-204ENST00000483723 ZNF329Q86UD4 541 aa10.88□□□□□ -0.67
CLK3-204ENST00000483723 C15orf54Q8N8G6 183 aa10.88□□□□□ -0.67
CLK3-204ENST00000483723 YPEL4Q96NS1 127 aa10.88□□□□□ -0.67
CLK3-204ENST00000483723 ZFAND3Q9H8U3 227 aa10.88□□□□□ -0.67
CLK3-204ENST00000483723 LY96Q9Y6Y9 160 aa10.88□□□□□ -0.67
CLK3-204ENST00000483723 CXorf65A6NEN9 183 aa10.87□□□□□ -0.67
CLK3-204ENST00000483723 HOXA3O43365 443 aaPredicted RBP10.87□□□□□ -0.67
CLK3-204ENST00000483723 TOMM20LQ6UXN7 152 aa10.87□□□□□ -0.67
CLK3-204ENST00000483723 LINC01551Q86U37 167 aa10.87□□□□□ -0.67
CLK3-204ENST00000483723 BPIFA4PQ86YQ2 179 aa10.87□□□□□ -0.67
CLK3-204ENST00000483723 CTDSP1Q9GZU7 261 aa10.87□□□□□ -0.67
CLK3-204ENST00000483723 ZNF586Q9NXT0 402 aa10.87□□□□□ -0.67
CLK3-204ENST00000483723 RNF24Q9Y225 148 aa10.87□□□□□ -0.67
CLK3-204ENST00000483723 ITPR2Q14571 2701 aa10.87□□□□□ -0.67
CLK3-204ENST00000483723 TMEM89A2RUT3 159 aa10.87□□□□□ -0.67
CLK3-204ENST00000483723 IGLC2P0DOY2 106 aa10.87□□□□□ -0.67
CLK3-204ENST00000483723 TPPP2P59282 170 aa10.87□□□□□ -0.67
CLK3-204ENST00000483723 TMEM86BQ8N661 226 aa10.87□□□□□ -0.67
CLK3-204ENST00000483723 TMEM190Q8WZ59 177 aa10.87□□□□□ -0.67
CLK3-204ENST00000483723 KLK15Q9H2R5 256 aa10.87□□□□□ -0.67
CLK3-204ENST00000483723 PRELID1Q9Y255 219 aa10.87□□□□□ -0.67
CLK3-204ENST00000483723 CELSR1Q9NYQ6 3014 aa10.86□□□□□ -0.67
CLK3-204ENST00000483723 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.86□□□□□ -0.67
CLK3-204ENST00000483723 HELTA6NFD8 242 aa10.86□□□□□ -0.67
CLK3-204ENST00000483723 BMPR1BO00238 502 aa10.86□□□□□ -0.67
CLK3-204ENST00000483723 IGHG4P01861 327 aa10.86□□□□□ -0.67
CLK3-204ENST00000483723 RPL35P42766 123 aaKnown RBP10.86□□□□□ -0.67
CLK3-204ENST00000483723 RANP62826 216 aaKnown RBP10.86□□□□□ -0.67
CLK3-204ENST00000483723 ADIRFQ15847 76 aa10.86□□□□□ -0.67
CLK3-204ENST00000483723 PRSS22Q9GZN4 317 aa10.86□□□□□ -0.67
CLK3-204ENST00000483723 RABAC1Q9UI14 185 aa10.86□□□□□ -0.67
CLK3-204ENST00000483723 PGPA6NDG6 321 aa10.85□□□□□ -0.67
CLK3-204ENST00000483723 S100A7P31151 101 aa10.85□□□□□ -0.67
CLK3-204ENST00000483723 RAB9AP51151 201 aa10.85□□□□□ -0.67
CLK3-204ENST00000483723 RELQ04864 619 aaPredicted RBP10.85□□□□□ -0.67
CLK3-204ENST00000483723 RNF212Q495C1 297 aa10.85□□□□□ -0.67
CLK3-204ENST00000483723 SIGLECL1Q8N7X8 197 aa10.85□□□□□ -0.67
CLK3-204ENST00000483723 OCC1Q8TAD7 63 aa10.85□□□□□ -0.67
CLK3-204ENST00000483723 BLNKQ8WV28 456 aa10.85□□□□□ -0.67
CLK3-204ENST00000483723 ZNF702PQ9H963 129 aa10.85□□□□□ -0.67
CLK3-204ENST00000483723 TRBV19A0A075B6N1 114 aa10.84□□□□□ -0.67
CLK3-204ENST00000483723 A0A0G2JLM5 398 aa10.84□□□□□ -0.67
CLK3-204ENST00000483723 CLPSL1A2RUU4 121 aa10.84□□□□□ -0.67
CLK3-204ENST00000483723 MT-ND4LP03901 98 aa10.84□□□□□ -0.67
CLK3-204ENST00000483723 PF4V1P10720 104 aa10.84□□□□□ -0.67
CLK3-204ENST00000483723 PSMB8P28062 276 aa10.84□□□□□ -0.67
CLK3-204ENST00000483723 TAS2R60P59551 318 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms